Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm24586-201ENSMUST00000116695 89 ntBASIC-0.66□□□□□ -2.52
Ddx28Q9CWT6 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.66□□□□□ -2.52
Ddx28Q9CWT6 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.66□□□□□ -2.52
Ddx28Q9CWT6 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.66□□□□□ -2.52
Ddx28Q9CWT6 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.66□□□□□ -2.52
Ddx28Q9CWT6 Gm25815-201ENSMUST00000082755 107 ntBASIC-0.66□□□□□ -2.52
Ddx28Q9CWT6 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.67□□□□□ -2.52
Ddx28Q9CWT6 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.67□□□□□ -2.52
Ddx28Q9CWT6 Gm25964-201ENSMUST00000157171 97 ntBASIC-0.68□□□□□ -2.52
Ddx28Q9CWT6 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.69□□□□□ -2.52
Ddx28Q9CWT6 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.69□□□□□ -2.52
Ddx28Q9CWT6 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.7□□□□□ -2.52
Ddx28Q9CWT6 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.7□□□□□ -2.52
Ddx28Q9CWT6 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.7□□□□□ -2.52
Ddx28Q9CWT6 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.71□□□□□ -2.52
Ddx28Q9CWT6 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.71□□□□□ -2.52
Ddx28Q9CWT6 Mir717-201ENSMUST00000102259 109 ntBASIC-0.72□□□□□ -2.52
Ddx28Q9CWT6 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.72□□□□□ -2.52
Ddx28Q9CWT6 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.72□□□□□ -2.52
Ddx28Q9CWT6 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.72□□□□□ -2.52
Ddx28Q9CWT6 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.72□□□□□ -2.52
Ddx28Q9CWT6 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.73□□□□□ -2.53
Ddx28Q9CWT6 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.74□□□□□ -2.53
Ddx28Q9CWT6 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.74□□□□□ -2.53
Ddx28Q9CWT6 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.74□□□□□ -2.53
Ddx28Q9CWT6 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.75□□□□□ -2.53
Ddx28Q9CWT6 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.75□□□□□ -2.53
Ddx28Q9CWT6 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.75□□□□□ -2.53
Ddx28Q9CWT6 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.75□□□□□ -2.53
Ddx28Q9CWT6 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.76□□□□□ -2.53
Ddx28Q9CWT6 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.77□□□□□ -2.53
Ddx28Q9CWT6 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.78□□□□□ -2.53
Ddx28Q9CWT6 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.79□□□□□ -2.54
Ddx28Q9CWT6 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.79□□□□□ -2.54
Ddx28Q9CWT6 Gm24482-201ENSMUST00000117005 93 ntBASIC-0.8□□□□□ -2.54
Ddx28Q9CWT6 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.81□□□□□ -2.54
Ddx28Q9CWT6 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.81□□□□□ -2.54
Ddx28Q9CWT6 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.81□□□□□ -2.54
Ddx28Q9CWT6 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.82□□□□□ -2.54
Ddx28Q9CWT6 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.82□□□□□ -2.54
Ddx28Q9CWT6 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.82□□□□□ -2.54
Ddx28Q9CWT6 Gm24410-201ENSMUST00000083433 107 ntBASIC-0.82□□□□□ -2.54
Ddx28Q9CWT6 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.83□□□□□ -2.54
Ddx28Q9CWT6 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.84□□□□□ -2.54
Ddx28Q9CWT6 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Mir574-201ENSMUST00000103854 78 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.85□□□□□ -2.55
Ddx28Q9CWT6 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.86□□□□□ -2.55
Ddx28Q9CWT6 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.86□□□□□ -2.55
Ddx28Q9CWT6 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.86□□□□□ -2.55
Ddx28Q9CWT6 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.87□□□□□ -2.55
Ddx28Q9CWT6 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.87□□□□□ -2.55
Ddx28Q9CWT6 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.87□□□□□ -2.55
Ddx28Q9CWT6 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.87□□□□□ -2.55
Ddx28Q9CWT6 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.87□□□□□ -2.55
Ddx28Q9CWT6 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.88□□□□□ -2.55
Ddx28Q9CWT6 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.88□□□□□ -2.55
Ddx28Q9CWT6 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.89□□□□□ -2.55
Ddx28Q9CWT6 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.89□□□□□ -2.55
Ddx28Q9CWT6 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.89□□□□□ -2.55
Ddx28Q9CWT6 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.89□□□□□ -2.55
Ddx28Q9CWT6 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.9□□□□□ -2.55
Ddx28Q9CWT6 Mir677-202ENSMUST00000197076 78 ntBASIC-0.9□□□□□ -2.55
Ddx28Q9CWT6 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.9□□□□□ -2.55
Ddx28Q9CWT6 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.92□□□□□ -2.56
Ddx28Q9CWT6 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.93□□□□□ -2.56
Ddx28Q9CWT6 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.93□□□□□ -2.56
Ddx28Q9CWT6 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.94□□□□□ -2.56
Ddx28Q9CWT6 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.94□□□□□ -2.56
Ddx28Q9CWT6 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.94□□□□□ -2.56
Ddx28Q9CWT6 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.94□□□□□ -2.56
Ddx28Q9CWT6 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.94□□□□□ -2.56
Ddx28Q9CWT6 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.95□□□□□ -2.56
Ddx28Q9CWT6 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.96□□□□□ -2.56
Ddx28Q9CWT6 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.96□□□□□ -2.56
Ddx28Q9CWT6 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.96□□□□□ -2.56
Ddx28Q9CWT6 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.97□□□□□ -2.56
Ddx28Q9CWT6 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.97□□□□□ -2.56
Ddx28Q9CWT6 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.97□□□□□ -2.56
Ddx28Q9CWT6 Mir876-201ENSMUST00000104659 81 ntBASIC-0.98□□□□□ -2.57
Ddx28Q9CWT6 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.98□□□□□ -2.57
Ddx28Q9CWT6 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.98□□□□□ -2.57
Ddx28Q9CWT6 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.98□□□□□ -2.57
Ddx28Q9CWT6 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.99□□□□□ -2.57
Ddx28Q9CWT6 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.99□□□□□ -2.57
Ddx28Q9CWT6 Gm22938-201ENSMUST00000103956 120 ntBASIC-1□□□□□ -2.57
Ddx28Q9CWT6 Gm23590-201ENSMUST00000157661 104 ntBASIC-1□□□□□ -2.57
Ddx28Q9CWT6 Gm24108-201ENSMUST00000175495 77 ntBASIC-1□□□□□ -2.57
Ddx28Q9CWT6 Mir6961-201ENSMUST00000183874 67 ntBASIC-1□□□□□ -2.57
Ddx28Q9CWT6 Mir302c-201ENSMUST00000083548 68 ntBASIC-1□□□□□ -2.57
Ddx28Q9CWT6 Gm24704-201ENSMUST00000093715 107 ntBASIC-1□□□□□ -2.57
Ddx28Q9CWT6 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.01□□□□□ -2.57
Ddx28Q9CWT6 Mir136-201ENSMUST00000199494 62 ntBASIC-1.01□□□□□ -2.57
Ddx28Q9CWT6 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.01□□□□□ -2.57
Ddx28Q9CWT6 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms