Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm27289-201ENSMUST00000183341 82 ntBASIC0.89□□□□□ -2.27
Trim11Q99PQ2 Mir8116-201ENSMUST00000184134 97 ntBASIC0.89□□□□□ -2.27
Trim11Q99PQ2 Mir7059-201ENSMUST00000184825 59 ntBASIC0.89□□□□□ -2.27
Trim11Q99PQ2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim11Q99PQ2 Mir362-201ENSMUST00000093592 65 ntBASIC0.89□□□□□ -2.27
Trim11Q99PQ2 Mir1955-201ENSMUST00000158014 98 ntBASIC0.88□□□□□ -2.27
Trim11Q99PQ2 Gm38113-201ENSMUST00000193704 201 ntBASIC0.88□□□□□ -2.27
Trim11Q99PQ2 Gm44457-201ENSMUST00000198109 76 ntBASIC0.88□□□□□ -2.27
Trim11Q99PQ2 Gm44803-201ENSMUST00000204384 156 ntBASIC0.88□□□□□ -2.27
Trim11Q99PQ2 Gm23735-201ENSMUST00000082551 134 ntBASIC0.88□□□□□ -2.27
Trim11Q99PQ2 Gm24258-201ENSMUST00000083739 133 ntBASIC0.88□□□□□ -2.27
Trim11Q99PQ2 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trim11Q99PQ2 Mir363-201ENSMUST00000093598 75 ntBASIC0.87□□□□□ -2.27
Trim11Q99PQ2 Gm23328-201ENSMUST00000157418 132 ntBASIC0.86□□□□□ -2.27
Trim11Q99PQ2 Mir7663-201ENSMUST00000183950 61 ntBASIC0.86□□□□□ -2.27
Trim11Q99PQ2 Gm26082-201ENSMUST00000104070 127 ntBASIC0.84□□□□□ -2.27
Trim11Q99PQ2 Gm27894-201ENSMUST00000184177 92 ntBASIC0.84□□□□□ -2.27
Trim11Q99PQ2 Mir6240-201ENSMUST00000184281 117 ntBASIC0.84□□□□□ -2.27
Trim11Q99PQ2 Mir3065-201ENSMUST00000198674 87 ntBASIC0.84□□□□□ -2.27
Trim11Q99PQ2 Gm22981-201ENSMUST00000082611 75 ntBASIC0.84□□□□□ -2.27
Trim11Q99PQ2 Gm22149-201ENSMUST00000104442 136 ntBASIC0.83□□□□□ -2.28
Trim11Q99PQ2 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trim11Q99PQ2 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.83□□□□□ -2.28
Trim11Q99PQ2 Gm25506-201ENSMUST00000104339 70 ntBASIC0.82□□□□□ -2.28
Trim11Q99PQ2 Mir6389-201ENSMUST00000183661 102 ntBASIC0.82□□□□□ -2.28
Trim11Q99PQ2 Mir7065-201ENSMUST00000185110 61 ntBASIC0.82□□□□□ -2.28
Trim11Q99PQ2 Gm45617-201ENSMUST00000211132 209 ntBASIC0.82□□□□□ -2.28
Trim11Q99PQ2 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.81□□□□□ -2.28
Trim11Q99PQ2 Mir18-201ENSMUST00000083469 96 ntBASIC0.81□□□□□ -2.28
Trim11Q99PQ2 Mir142b-201ENSMUST00000083486 115 ntBASIC0.81□□□□□ -2.28
Trim11Q99PQ2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.8□□□□□ -2.28
Trim11Q99PQ2 Gm25161-201ENSMUST00000158913 132 ntBASIC0.8□□□□□ -2.28
Trim11Q99PQ2 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.8□□□□□ -2.28
Trim11Q99PQ2 Gm24459-201ENSMUST00000082730 86 ntBASIC0.8□□□□□ -2.28
Trim11Q99PQ2 Gm24379-201ENSMUST00000122695 86 ntBASIC0.79□□□□□ -2.28
Trim11Q99PQ2 Gm23060-201ENSMUST00000102345 109 ntBASIC0.78□□□□□ -2.28
Trim11Q99PQ2 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.78□□□□□ -2.28
Trim11Q99PQ2 Gm22301-201ENSMUST00000082656 107 ntBASIC0.78□□□□□ -2.28
Trim11Q99PQ2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.77□□□□□ -2.29
Trim11Q99PQ2 Mir3968-201ENSMUST00000175355 100 ntBASIC0.77□□□□□ -2.29
Trim11Q99PQ2 Mir7052-201ENSMUST00000184821 65 ntBASIC0.77□□□□□ -2.29
Trim11Q99PQ2 Gm27798-201ENSMUST00000184989 71 ntBASIC0.77□□□□□ -2.29
Trim11Q99PQ2 Mir1954-201ENSMUST00000175595 86 ntBASIC0.76□□□□□ -2.29
Trim11Q99PQ2 Gm37750-201ENSMUST00000193563 129 ntBASIC0.76□□□□□ -2.29
Trim11Q99PQ2 Gm22673-201ENSMUST00000104415 131 ntBASIC0.75□□□□□ -2.29
Trim11Q99PQ2 Gm22157-201ENSMUST00000158410 104 ntBASIC0.75□□□□□ -2.29
Trim11Q99PQ2 Gm23240-201ENSMUST00000083009 121 ntBASIC0.75□□□□□ -2.29
Trim11Q99PQ2 Gm23410-201ENSMUST00000179967 107 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Gm25132-201ENSMUST00000082652 107 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Gm22505-201ENSMUST00000082956 108 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Gm22363-201ENSMUST00000083100 108 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Mir224-201ENSMUST00000083608 82 ntBASIC0.74□□□□□ -2.29
Trim11Q99PQ2 Gm23483-201ENSMUST00000104179 108 ntBASIC0.73□□□□□ -2.29
Trim11Q99PQ2 Mir216a-201ENSMUST00000083605 72 ntBASIC0.73□□□□□ -2.29
Trim11Q99PQ2 Gm37832-201ENSMUST00000118935 189 ntBASIC0.72□□□□□ -2.29
Trim11Q99PQ2 Gm22239-201ENSMUST00000175220 103 ntBASIC0.72□□□□□ -2.29
Trim11Q99PQ2 Gm26301-201ENSMUST00000104813 95 ntBASIC0.71□□□□□ -2.3
Trim11Q99PQ2 Gm24651-201ENSMUST00000157107 107 ntBASIC0.71□□□□□ -2.3
Trim11Q99PQ2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Trim11Q99PQ2 Mir1948-201ENSMUST00000157325 85 ntBASIC0.7□□□□□ -2.3
Trim11Q99PQ2 Gm27656-201ENSMUST00000185055 80 ntBASIC0.7□□□□□ -2.3
Trim11Q99PQ2 Gm38208-201ENSMUST00000192476 114 ntBASIC0.7□□□□□ -2.3
Trim11Q99PQ2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.69□□□□□ -2.3
Trim11Q99PQ2 Snord71-201ENSMUST00000104361 85 ntBASIC0.69□□□□□ -2.3
Trim11Q99PQ2 Gm22335-201ENSMUST00000157724 99 ntBASIC0.69□□□□□ -2.3
Trim11Q99PQ2 Gm25158-201ENSMUST00000177681 121 ntBASIC0.69□□□□□ -2.3
Trim11Q99PQ2 Gm26229-201ENSMUST00000179699 121 ntBASIC0.69□□□□□ -2.3
Trim11Q99PQ2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.68□□□□□ -2.3
Trim11Q99PQ2 Gm22260-201ENSMUST00000178643 107 ntBASIC0.68□□□□□ -2.3
Trim11Q99PQ2 Gm27749-201ENSMUST00000183651 125 ntBASIC0.68□□□□□ -2.3
Trim11Q99PQ2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.67□□□□□ -2.3
Trim11Q99PQ2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.66□□□□□ -2.3
Trim11Q99PQ2 Gm23340-201ENSMUST00000158955 123 ntBASIC0.65□□□□□ -2.31
Trim11Q99PQ2 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.65□□□□□ -2.31
Trim11Q99PQ2 Gm22550-201ENSMUST00000179774 107 ntBASIC0.65□□□□□ -2.31
Trim11Q99PQ2 Gm22060-201ENSMUST00000082558 107 ntBASIC0.65□□□□□ -2.31
Trim11Q99PQ2 Gm23607-201ENSMUST00000104550 126 ntBASIC0.63□□□□□ -2.31
Trim11Q99PQ2 Gm26236-201ENSMUST00000175536 137 ntBASIC0.63□□□□□ -2.31
Trim11Q99PQ2 Gm22565-201ENSMUST00000175540 69 ntBASIC0.63□□□□□ -2.31
Trim11Q99PQ2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Trim11Q99PQ2 Mir6394-201ENSMUST00000184738 99 ntBASIC0.63□□□□□ -2.31
Trim11Q99PQ2 Mir200b-201ENSMUST00000083615 70 ntBASIC0.63□□□□□ -2.31
Trim11Q99PQ2 Gm25903-201ENSMUST00000158492 103 ntBASIC0.62□□□□□ -2.31
Trim11Q99PQ2 Gm23992-201ENSMUST00000174981 67 ntBASIC0.62□□□□□ -2.31
Trim11Q99PQ2 Gm22056-201ENSMUST00000083386 81 ntBASIC0.62□□□□□ -2.31
Trim11Q99PQ2 Mir702-201ENSMUST00000102285 109 ntBASIC0.61□□□□□ -2.31
Trim11Q99PQ2 Mir344-201ENSMUST00000083634 95 ntBASIC0.61□□□□□ -2.31
Trim11Q99PQ2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.6□□□□□ -2.31
Trim11Q99PQ2 Mir6985-201ENSMUST00000184641 61 ntBASIC0.6□□□□□ -2.31
Trim11Q99PQ2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.6□□□□□ -2.31
Trim11Q99PQ2 Gm22838-201ENSMUST00000158437 99 ntBASIC0.59□□□□□ -2.31
Trim11Q99PQ2 Gm25791-201ENSMUST00000083292 137 ntBASIC0.59□□□□□ -2.31
Trim11Q99PQ2 Gm24323-201ENSMUST00000175342 77 ntBASIC0.58□□□□□ -2.32
Trim11Q99PQ2 Mir6896-201ENSMUST00000198033 73 ntBASIC0.58□□□□□ -2.32
Trim11Q99PQ2 Mir7651-201ENSMUST00000184154 64 ntBASIC0.57□□□□□ -2.32
Trim11Q99PQ2 Gm44458-201ENSMUST00000196594 143 ntBASIC0.57□□□□□ -2.32
Trim11Q99PQ2 Gm22593-201ENSMUST00000104245 109 ntBASIC0.56□□□□□ -2.32
Trim11Q99PQ2 Gm24372-201ENSMUST00000104400 110 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 178.3 ms