Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm27607-201ENSMUST00000185162 122 ntBASIC0.24□□□□□ -2.37
Pcdha1Q91Y21 Snora62-201ENSMUST00000082991 149 ntBASIC0.24□□□□□ -2.37
Pcdha1Q91Y21 Mir717-201ENSMUST00000102259 109 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Mir669f-201ENSMUST00000103850 121 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Gm23494-201ENSMUST00000116830 126 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Gm22838-201ENSMUST00000158437 99 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Gm44328-201ENSMUST00000199331 75 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Gm24201-201ENSMUST00000082946 125 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Mir15b-201ENSMUST00000083646 64 ntBASIC0.23□□□□□ -2.37
Pcdha1Q91Y21 Gm23180-201ENSMUST00000158686 125 ntBASIC0.22□□□□□ -2.37
Pcdha1Q91Y21 Snord45b-201ENSMUST00000082797 71 ntBASIC0.22□□□□□ -2.37
Pcdha1Q91Y21 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.22□□□□□ -2.37
Pcdha1Q91Y21 Gm26485-201ENSMUST00000158019 64 ntBASIC0.21□□□□□ -2.38
Pcdha1Q91Y21 Mir3967-201ENSMUST00000198710 68 ntBASIC0.21□□□□□ -2.38
Pcdha1Q91Y21 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.21□□□□□ -2.38
Pcdha1Q91Y21 Gm23994-201ENSMUST00000158059 88 ntBASIC0.2□□□□□ -2.38
Pcdha1Q91Y21 Gm25952-201ENSMUST00000175329 74 ntBASIC0.2□□□□□ -2.38
Pcdha1Q91Y21 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.2□□□□□ -2.38
Pcdha1Q91Y21 Gm23278-201ENSMUST00000157911 143 ntBASIC0.19□□□□□ -2.38
Pcdha1Q91Y21 Gm23159-201ENSMUST00000175088 77 ntBASIC0.19□□□□□ -2.38
Pcdha1Q91Y21 Gm27263-201ENSMUST00000184760 76 ntBASIC0.19□□□□□ -2.38
Pcdha1Q91Y21 Gm11966-201ENSMUST00000119907 87 ntBASIC0.17□□□□□ -2.38
Pcdha1Q91Y21 Gm22067-201ENSMUST00000122790 107 ntBASIC0.16□□□□□ -2.38
Pcdha1Q91Y21 Gm23761-201ENSMUST00000158347 104 ntBASIC0.16□□□□□ -2.38
Pcdha1Q91Y21 Mir494-201ENSMUST00000093632 85 ntBASIC0.16□□□□□ -2.38
Pcdha1Q91Y21 Gm22595-201ENSMUST00000104250 130 ntBASIC0.15□□□□□ -2.39
Pcdha1Q91Y21 Gm24400-201ENSMUST00000157865 107 ntBASIC0.15□□□□□ -2.39
Pcdha1Q91Y21 Gm24467-201ENSMUST00000157887 126 ntBASIC0.15□□□□□ -2.39
Pcdha1Q91Y21 Gm23856-201ENSMUST00000158380 99 ntBASIC0.15□□□□□ -2.39
Pcdha1Q91Y21 Gm23017-201ENSMUST00000177583 72 ntBASIC0.15□□□□□ -2.39
Pcdha1Q91Y21 Gm25497-201ENSMUST00000104425 132 ntBASIC0.14□□□□□ -2.39
Pcdha1Q91Y21 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
Pcdha1Q91Y21 Gm23785-201ENSMUST00000116741 96 ntBASIC0.13□□□□□ -2.39
Pcdha1Q91Y21 Gm24331-201ENSMUST00000175099 67 ntBASIC0.13□□□□□ -2.39
Pcdha1Q91Y21 Gm23801-201ENSMUST00000175561 67 ntBASIC0.13□□□□□ -2.39
Pcdha1Q91Y21 Gm24485-201ENSMUST00000178283 67 ntBASIC0.13□□□□□ -2.39
Pcdha1Q91Y21 Gm23442-201ENSMUST00000082919 134 ntBASIC0.13□□□□□ -2.39
Pcdha1Q91Y21 Mir7651-201ENSMUST00000184154 64 ntBASIC0.11□□□□□ -2.39
Pcdha1Q91Y21 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.11□□□□□ -2.39
Pcdha1Q91Y21 Snord85-201ENSMUST00000083262 73 ntBASIC0.11□□□□□ -2.39
Pcdha1Q91Y21 Gm22540-201ENSMUST00000158168 117 ntBASIC0.1□□□□□ -2.39
Pcdha1Q91Y21 Gm24843-201ENSMUST00000158682 76 ntBASIC0.1□□□□□ -2.39
Pcdha1Q91Y21 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.1□□□□□ -2.39
Pcdha1Q91Y21 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Pcdha1Q91Y21 Gm22368-201ENSMUST00000102416 109 ntBASIC0.09□□□□□ -2.4
Pcdha1Q91Y21 Gm22048-201ENSMUST00000104721 89 ntBASIC0.09□□□□□ -2.4
Pcdha1Q91Y21 Gm23590-201ENSMUST00000157661 104 ntBASIC0.09□□□□□ -2.4
Pcdha1Q91Y21 Gm25885-201ENSMUST00000157779 109 ntBASIC0.08□□□□□ -2.4
Pcdha1Q91Y21 Gm25847-201ENSMUST00000116793 96 ntBASIC0.07□□□□□ -2.4
Pcdha1Q91Y21 Gm38208-201ENSMUST00000192476 114 ntBASIC0.07□□□□□ -2.4
Pcdha1Q91Y21 Gm22298-201ENSMUST00000082662 133 ntBASIC0.06□□□□□ -2.4
Pcdha1Q91Y21 Gm23237-201ENSMUST00000104639 92 ntBASIC0.04□□□□□ -2.4
Pcdha1Q91Y21 Gm26257-201ENSMUST00000122500 107 ntBASIC0.04□□□□□ -2.4
Pcdha1Q91Y21 Gm25703-201ENSMUST00000083123 151 ntBASIC0.04□□□□□ -2.4
Pcdha1Q91Y21 Gm22327-201ENSMUST00000158899 108 ntBASIC0.03□□□□□ -2.4
Pcdha1Q91Y21 Mir3089-201ENSMUST00000175350 84 ntBASIC0.03□□□□□ -2.4
Pcdha1Q91Y21 Gm24903-201ENSMUST00000158131 126 ntBASIC0.02□□□□□ -2.41
Pcdha1Q91Y21 Gm27749-201ENSMUST00000183651 125 ntBASIC0.01□□□□□ -2.41
Pcdha1Q91Y21 Gm44375-201ENSMUST00000196657 150 ntBASIC0.01□□□□□ -2.41
Pcdha1Q91Y21 Gm26491-201ENSMUST00000179268 121 ntBASIC0□□□□□ -2.41
Pcdha1Q91Y21 Mir327-201ENSMUST00000199328 69 ntBASIC0□□□□□ -2.41
Pcdha1Q91Y21 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.01□□□□□ -2.41
Pcdha1Q91Y21 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.01□□□□□ -2.41
Pcdha1Q91Y21 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.02□□□□□ -2.41
Pcdha1Q91Y21 Mir382-201ENSMUST00000083494 76 ntBASIC-0.03□□□□□ -2.41
Pcdha1Q91Y21 Gm25552-201ENSMUST00000158081 91 ntBASIC-0.04□□□□□ -2.42
Pcdha1Q91Y21 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.04□□□□□ -2.42
Pcdha1Q91Y21 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.04□□□□□ -2.42
Pcdha1Q91Y21 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.04□□□□□ -2.42
Pcdha1Q91Y21 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.05□□□□□ -2.42
Pcdha1Q91Y21 Gm23649-201ENSMUST00000179007 107 ntBASIC-0.05□□□□□ -2.42
Pcdha1Q91Y21 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.05□□□□□ -2.42
Pcdha1Q91Y21 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Pcdha1Q91Y21 Gm25648-201ENSMUST00000177844 79 ntBASIC-0.07□□□□□ -2.42
Pcdha1Q91Y21 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.07□□□□□ -2.42
Pcdha1Q91Y21 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.08□□□□□ -2.42
Pcdha1Q91Y21 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.08□□□□□ -2.42
Pcdha1Q91Y21 Mir141-201ENSMUST00000083540 72 ntBASIC-0.08□□□□□ -2.42
Pcdha1Q91Y21 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.09□□□□□ -2.42
Pcdha1Q91Y21 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.09□□□□□ -2.42
Pcdha1Q91Y21 AC157278.1-201ENSMUST00000221621 148 ntBASIC-0.09□□□□□ -2.42
Pcdha1Q91Y21 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.09□□□□□ -2.42
Pcdha1Q91Y21 Gm25183-201ENSMUST00000157752 106 ntBASIC-0.1□□□□□ -2.43
Pcdha1Q91Y21 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.1□□□□□ -2.43
Pcdha1Q91Y21 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.11□□□□□ -2.43
Pcdha1Q91Y21 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.11□□□□□ -2.43
Pcdha1Q91Y21 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.11□□□□□ -2.43
Pcdha1Q91Y21 Snord57-201ENSMUST00000083338 72 ntBASIC-0.11□□□□□ -2.43
Pcdha1Q91Y21 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.12□□□□□ -2.43
Pcdha1Q91Y21 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.12□□□□□ -2.43
Pcdha1Q91Y21 Mir672-201ENSMUST00000102331 100 ntBASIC-0.13□□□□□ -2.43
Pcdha1Q91Y21 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.13□□□□□ -2.43
Pcdha1Q91Y21 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.14□□□□□ -2.43
Pcdha1Q91Y21 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.14□□□□□ -2.43
Pcdha1Q91Y21 Mir191-201ENSMUST00000196210 74 ntBASIC-0.15□□□□□ -2.43
Pcdha1Q91Y21 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.15□□□□□ -2.43
Pcdha1Q91Y21 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.16□□□□□ -2.44
Pcdha1Q91Y21 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 269.1 ms