Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Mir200b-201ENSMUST00000083615 70 ntBASIC0.42□□□□□ -2.34
Rpa1Q8VEE4 Mir6985-201ENSMUST00000184641 61 ntBASIC0.41□□□□□ -2.34
Rpa1Q8VEE4 Gm29344-201ENSMUST00000068143 210 ntBASIC0.41□□□□□ -2.34
Rpa1Q8VEE4 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
Rpa1Q8VEE4 Gm25183-201ENSMUST00000157752 106 ntBASIC0.38□□□□□ -2.35
Rpa1Q8VEE4 Gm22838-201ENSMUST00000158437 99 ntBASIC0.38□□□□□ -2.35
Rpa1Q8VEE4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.37□□□□□ -2.35
Rpa1Q8VEE4 Gm23072-201ENSMUST00000158243 123 ntBASIC0.37□□□□□ -2.35
Rpa1Q8VEE4 Gm26285-201ENSMUST00000177923 107 ntBASIC0.37□□□□□ -2.35
Rpa1Q8VEE4 Gm23622-201ENSMUST00000082460 107 ntBASIC0.37□□□□□ -2.35
Rpa1Q8VEE4 Mir6905-201ENSMUST00000184228 70 ntBASIC0.36□□□□□ -2.35
Rpa1Q8VEE4 Gm25791-201ENSMUST00000083292 137 ntBASIC0.36□□□□□ -2.35
Rpa1Q8VEE4 Gm24927-201ENSMUST00000083397 107 ntBASIC0.36□□□□□ -2.35
Rpa1Q8VEE4 Mir344-201ENSMUST00000083634 95 ntBASIC0.36□□□□□ -2.35
Rpa1Q8VEE4 Gm24833-201ENSMUST00000116775 120 ntBASIC0.35□□□□□ -2.35
Rpa1Q8VEE4 Gm13577-201ENSMUST00000121365 205 ntBASIC0.35□□□□□ -2.35
Rpa1Q8VEE4 Gm22149-201ENSMUST00000104442 136 ntBASIC0.34□□□□□ -2.36
Rpa1Q8VEE4 Gm27450-201ENSMUST00000104632 90 ntBASIC0.34□□□□□ -2.36
Rpa1Q8VEE4 Gm44828-201ENSMUST00000203745 106 ntBASIC0.34□□□□□ -2.36
Rpa1Q8VEE4 Gm23821-201ENSMUST00000158738 106 ntBASIC0.33□□□□□ -2.36
Rpa1Q8VEE4 Gm26116-201ENSMUST00000175600 77 ntBASIC0.32□□□□□ -2.36
Rpa1Q8VEE4 Gm24342-201ENSMUST00000103907 104 ntBASIC0.31□□□□□ -2.36
Rpa1Q8VEE4 Gm24396-201ENSMUST00000116905 93 ntBASIC0.31□□□□□ -2.36
Rpa1Q8VEE4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Rpa1Q8VEE4 Mir7651-201ENSMUST00000184154 64 ntBASIC0.31□□□□□ -2.36
Rpa1Q8VEE4 Gm23321-201ENSMUST00000104465 126 ntBASIC0.3□□□□□ -2.36
Rpa1Q8VEE4 Gm24226-201ENSMUST00000158826 97 ntBASIC0.3□□□□□ -2.36
Rpa1Q8VEE4 Gm38208-201ENSMUST00000192476 114 ntBASIC0.3□□□□□ -2.36
Rpa1Q8VEE4 Gm25952-201ENSMUST00000175329 74 ntBASIC0.28□□□□□ -2.36
Rpa1Q8VEE4 Mir6365-201ENSMUST00000183990 101 ntBASIC0.28□□□□□ -2.36
Rpa1Q8VEE4 Mir7231-201ENSMUST00000196252 61 ntBASIC0.28□□□□□ -2.36
Rpa1Q8VEE4 Gm25802-201ENSMUST00000082639 77 ntBASIC0.28□□□□□ -2.36
Rpa1Q8VEE4 Snord57-201ENSMUST00000083338 72 ntBASIC0.28□□□□□ -2.36
Rpa1Q8VEE4 Gm23159-201ENSMUST00000175088 77 ntBASIC0.27□□□□□ -2.37
Rpa1Q8VEE4 Gm22298-201ENSMUST00000082662 133 ntBASIC0.25□□□□□ -2.37
Rpa1Q8VEE4 Gm24612-201ENSMUST00000083267 107 ntBASIC0.25□□□□□ -2.37
Rpa1Q8VEE4 Mir487b-201ENSMUST00000102265 82 ntBASIC0.24□□□□□ -2.37
Rpa1Q8VEE4 Gm23126-201ENSMUST00000104260 134 ntBASIC0.23□□□□□ -2.37
Rpa1Q8VEE4 Gm26139-201ENSMUST00000180098 107 ntBASIC0.23□□□□□ -2.37
Rpa1Q8VEE4 Gm27749-201ENSMUST00000183651 125 ntBASIC0.22□□□□□ -2.37
Rpa1Q8VEE4 Gm23442-201ENSMUST00000082919 134 ntBASIC0.21□□□□□ -2.38
Rpa1Q8VEE4 Gm23730-201ENSMUST00000083236 107 ntBASIC0.21□□□□□ -2.38
Rpa1Q8VEE4 Mir710-201ENSMUST00000102088 110 ntBASIC0.2□□□□□ -2.38
Rpa1Q8VEE4 Mir8116-201ENSMUST00000184134 97 ntBASIC0.19□□□□□ -2.38
Rpa1Q8VEE4 Gm22039-201ENSMUST00000157278 132 ntBASIC0.18□□□□□ -2.38
Rpa1Q8VEE4 Gm24843-201ENSMUST00000158682 76 ntBASIC0.18□□□□□ -2.38
Rpa1Q8VEE4 Snord85-201ENSMUST00000083262 73 ntBASIC0.18□□□□□ -2.38
Rpa1Q8VEE4 Gm24555-201ENSMUST00000104548 124 ntBASIC0.17□□□□□ -2.38
Rpa1Q8VEE4 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.17□□□□□ -2.38
Rpa1Q8VEE4 Mir3967-201ENSMUST00000198710 68 ntBASIC0.17□□□□□ -2.38
Rpa1Q8VEE4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.16□□□□□ -2.38
Rpa1Q8VEE4 Gm22078-201ENSMUST00000157593 103 ntBASIC0.16□□□□□ -2.38
Rpa1Q8VEE4 Gm24996-201ENSMUST00000158390 99 ntBASIC0.16□□□□□ -2.38
Rpa1Q8VEE4 Gm22016-201ENSMUST00000158793 114 ntBASIC0.15□□□□□ -2.39
Rpa1Q8VEE4 Gm22368-201ENSMUST00000102416 109 ntBASIC0.14□□□□□ -2.39
Rpa1Q8VEE4 Gm24772-201ENSMUST00000158507 110 ntBASIC0.14□□□□□ -2.39
Rpa1Q8VEE4 Gm25465-201ENSMUST00000157716 105 ntBASIC0.13□□□□□ -2.39
Rpa1Q8VEE4 Mir7077-201ENSMUST00000183991 57 ntBASIC0.13□□□□□ -2.39
Rpa1Q8VEE4 Mir219b-201ENSMUST00000198317 65 ntBASIC0.13□□□□□ -2.39
Rpa1Q8VEE4 Gm23955-201ENSMUST00000157214 100 ntBASIC0.12□□□□□ -2.39
Rpa1Q8VEE4 Gm22431-201ENSMUST00000158545 107 ntBASIC0.12□□□□□ -2.39
Rpa1Q8VEE4 Gm44375-201ENSMUST00000196657 150 ntBASIC0.12□□□□□ -2.39
Rpa1Q8VEE4 Gm22965-201ENSMUST00000157958 101 ntBASIC0.11□□□□□ -2.39
Rpa1Q8VEE4 Mir7079-201ENSMUST00000184697 69 ntBASIC0.1□□□□□ -2.39
Rpa1Q8VEE4 Mir142b-201ENSMUST00000083486 115 ntBASIC0.1□□□□□ -2.39
Rpa1Q8VEE4 Gm25652-201ENSMUST00000083780 103 ntBASIC0.1□□□□□ -2.39
Rpa1Q8VEE4 Gm25087-201ENSMUST00000101992 78 ntBASIC0.09□□□□□ -2.4
Rpa1Q8VEE4 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.09□□□□□ -2.4
Rpa1Q8VEE4 Gm26467-201ENSMUST00000097257 78 ntBASIC0.09□□□□□ -2.4
Rpa1Q8VEE4 Gm24725-201ENSMUST00000158229 125 ntBASIC0.08□□□□□ -2.4
Rpa1Q8VEE4 Mir382-201ENSMUST00000083494 76 ntBASIC0.08□□□□□ -2.4
Rpa1Q8VEE4 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.07□□□□□ -2.4
Rpa1Q8VEE4 Gm23173-201ENSMUST00000157161 160 ntBASIC0.06□□□□□ -2.4
Rpa1Q8VEE4 Gm22157-201ENSMUST00000158410 104 ntBASIC0.06□□□□□ -2.4
Rpa1Q8VEE4 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.05□□□□□ -2.4
Rpa1Q8VEE4 Gm24259-201ENSMUST00000083740 107 ntBASIC0.05□□□□□ -2.4
Rpa1Q8VEE4 Gm24797-201ENSMUST00000178103 107 ntBASIC0.03□□□□□ -2.4
Rpa1Q8VEE4 Mir327-201ENSMUST00000199328 69 ntBASIC0.03□□□□□ -2.4
Rpa1Q8VEE4 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Rpa1Q8VEE4 Gm23783-201ENSMUST00000157941 102 ntBASIC0.02□□□□□ -2.41
Rpa1Q8VEE4 Gm24218-201ENSMUST00000180163 105 ntBASIC0.02□□□□□ -2.41
Rpa1Q8VEE4 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Rpa1Q8VEE4 Gm22327-201ENSMUST00000158899 108 ntBASIC0.01□□□□□ -2.41
Rpa1Q8VEE4 Gm26210-201ENSMUST00000158680 91 ntBASIC0□□□□□ -2.41
Rpa1Q8VEE4 Mir3089-201ENSMUST00000175350 84 ntBASIC0□□□□□ -2.41
Rpa1Q8VEE4 Gm22746-201ENSMUST00000082494 107 ntBASIC0□□□□□ -2.41
Rpa1Q8VEE4 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.01□□□□□ -2.41
Rpa1Q8VEE4 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.01□□□□□ -2.41
Rpa1Q8VEE4 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.02□□□□□ -2.41
Rpa1Q8VEE4 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.02□□□□□ -2.41
Rpa1Q8VEE4 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.03□□□□□ -2.41
Rpa1Q8VEE4 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.04□□□□□ -2.42
Rpa1Q8VEE4 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.04□□□□□ -2.42
Rpa1Q8VEE4 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.05□□□□□ -2.42
Rpa1Q8VEE4 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.05□□□□□ -2.42
Rpa1Q8VEE4 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.05□□□□□ -2.42
Rpa1Q8VEE4 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.05□□□□□ -2.42
Rpa1Q8VEE4 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.06□□□□□ -2.42
Rpa1Q8VEE4 Mir672-201ENSMUST00000102331 100 ntBASIC-0.07□□□□□ -2.42
Rpa1Q8VEE4 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms