Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
Atg4aQ8C9S8 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.33□□□□□ -2.46
Atg4aQ8C9S8 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.33□□□□□ -2.46
Atg4aQ8C9S8 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.34□□□□□ -2.46
Atg4aQ8C9S8 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.34□□□□□ -2.46
Atg4aQ8C9S8 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.34□□□□□ -2.46
Atg4aQ8C9S8 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.34□□□□□ -2.46
Atg4aQ8C9S8 Gm23038-201ENSMUST00000083873 104 ntBASIC-0.34□□□□□ -2.46
Atg4aQ8C9S8 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.35□□□□□ -2.47
Atg4aQ8C9S8 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.35□□□□□ -2.47
Atg4aQ8C9S8 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.35□□□□□ -2.47
Atg4aQ8C9S8 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.35□□□□□ -2.47
Atg4aQ8C9S8 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.36□□□□□ -2.47
Atg4aQ8C9S8 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.36□□□□□ -2.47
Atg4aQ8C9S8 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.37□□□□□ -2.47
Atg4aQ8C9S8 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.37□□□□□ -2.47
Atg4aQ8C9S8 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.37□□□□□ -2.47
Atg4aQ8C9S8 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.37□□□□□ -2.47
Atg4aQ8C9S8 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.37□□□□□ -2.47
Atg4aQ8C9S8 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.38□□□□□ -2.47
Atg4aQ8C9S8 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.38□□□□□ -2.47
Atg4aQ8C9S8 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.38□□□□□ -2.47
Atg4aQ8C9S8 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.38□□□□□ -2.47
Atg4aQ8C9S8 Mir717-201ENSMUST00000102259 109 ntBASIC-0.39□□□□□ -2.47
Atg4aQ8C9S8 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.39□□□□□ -2.47
Atg4aQ8C9S8 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.39□□□□□ -2.47
Atg4aQ8C9S8 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.39□□□□□ -2.47
Atg4aQ8C9S8 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.4□□□□□ -2.47
Atg4aQ8C9S8 Gm22950-201ENSMUST00000082776 107 ntBASIC-0.4□□□□□ -2.47
Atg4aQ8C9S8 Gm25022-201ENSMUST00000102205 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.41□□□□□ -2.48
Atg4aQ8C9S8 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.42□□□□□ -2.48
Atg4aQ8C9S8 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.42□□□□□ -2.48
Atg4aQ8C9S8 Snord50a-201ENSMUST00000178154 72 ntBASIC-0.42□□□□□ -2.48
Atg4aQ8C9S8 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.42□□□□□ -2.48
Atg4aQ8C9S8 Gm44932-201ENSMUST00000206799 121 ntBASIC-0.42□□□□□ -2.48
Atg4aQ8C9S8 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.43□□□□□ -2.48
Atg4aQ8C9S8 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.43□□□□□ -2.48
Atg4aQ8C9S8 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.43□□□□□ -2.48
Atg4aQ8C9S8 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.44□□□□□ -2.48
Atg4aQ8C9S8 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.44□□□□□ -2.48
Atg4aQ8C9S8 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.45□□□□□ -2.48
Atg4aQ8C9S8 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.46□□□□□ -2.48
Atg4aQ8C9S8 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.46□□□□□ -2.48
Atg4aQ8C9S8 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.47□□□□□ -2.48
Atg4aQ8C9S8 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.47□□□□□ -2.48
Atg4aQ8C9S8 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.49□□□□□ -2.49
Atg4aQ8C9S8 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.49□□□□□ -2.49
Atg4aQ8C9S8 Mir876-201ENSMUST00000104659 81 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.5□□□□□ -2.49
Atg4aQ8C9S8 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.51□□□□□ -2.49
Atg4aQ8C9S8 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.51□□□□□ -2.49
Atg4aQ8C9S8 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.51□□□□□ -2.49
Atg4aQ8C9S8 Mir183-201ENSMUST00000083685 70 ntBASIC-0.51□□□□□ -2.49
Atg4aQ8C9S8 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.52□□□□□ -2.49
Atg4aQ8C9S8 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.52□□□□□ -2.49
Atg4aQ8C9S8 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.52□□□□□ -2.49
Atg4aQ8C9S8 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.53□□□□□ -2.49
Atg4aQ8C9S8 Mir574-201ENSMUST00000103854 78 ntBASIC-0.54□□□□□ -2.5
Atg4aQ8C9S8 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.54□□□□□ -2.5
Atg4aQ8C9S8 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.54□□□□□ -2.5
Atg4aQ8C9S8 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Atg4aQ8C9S8 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.55□□□□□ -2.5
Atg4aQ8C9S8 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.55□□□□□ -2.5
Atg4aQ8C9S8 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.56□□□□□ -2.5
Atg4aQ8C9S8 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.56□□□□□ -2.5
Atg4aQ8C9S8 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.57□□□□□ -2.5
Atg4aQ8C9S8 Mir96-201ENSMUST00000083652 106 ntBASIC-0.58□□□□□ -2.5
Atg4aQ8C9S8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Atg4aQ8C9S8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.59□□□□□ -2.5
Atg4aQ8C9S8 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.59□□□□□ -2.5
Atg4aQ8C9S8 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.6□□□□□ -2.51
Atg4aQ8C9S8 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.6□□□□□ -2.51
Atg4aQ8C9S8 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 327.7 ms