Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm24222-201ENSMUST00000158834 93 ntBASIC1.6□□□□□ -2.15
Trim35Q8C006 Gm38208-201ENSMUST00000192476 114 ntBASIC1.6□□□□□ -2.15
Trim35Q8C006 Gm24379-201ENSMUST00000122695 86 ntBASIC1.59□□□□□ -2.15
Trim35Q8C006 Gm44347-201ENSMUST00000199602 108 ntBASIC1.59□□□□□ -2.15
Trim35Q8C006 Gm44803-201ENSMUST00000204384 156 ntBASIC1.59□□□□□ -2.15
Trim35Q8C006 Gm15115-201ENSMUST00000121145 264 ntBASIC1.58□□□□□ -2.16
Trim35Q8C006 Mir3065-201ENSMUST00000198674 87 ntBASIC1.57□□□□□ -2.16
Trim35Q8C006 Gm24895-201ENSMUST00000122742 74 ntBASIC1.56□□□□□ -2.16
Trim35Q8C006 Gm25832-201ENSMUST00000104140 130 ntBASIC1.55□□□□□ -2.16
Trim35Q8C006 Mir8119-201ENSMUST00000183371 129 ntBASIC1.55□□□□□ -2.16
Trim35Q8C006 Gm27974-201ENSMUST00000183415 105 ntBASIC1.55□□□□□ -2.16
Trim35Q8C006 Gm27248-201ENSMUST00000184004 166 ntBASIC1.55□□□□□ -2.16
Trim35Q8C006 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1.55□□□□□ -2.16
Trim35Q8C006 DQ267101-201ENSMUST00000082562 73 ntBASIC1.54□□□□□ -2.16
Trim35Q8C006 Gm22981-201ENSMUST00000082611 75 ntBASIC1.53□□□□□ -2.16
Trim35Q8C006 Mir320-201ENSMUST00000083594 82 ntBASIC1.53□□□□□ -2.16
Trim35Q8C006 Mir670-201ENSMUST00000102380 100 ntBASIC1.52□□□□□ -2.17
Trim35Q8C006 Gm24174-201ENSMUST00000158933 111 ntBASIC1.52□□□□□ -2.17
Trim35Q8C006 Gm25995-201ENSMUST00000175396 142 ntBASIC1.52□□□□□ -2.17
Trim35Q8C006 Gm25161-201ENSMUST00000158913 132 ntBASIC1.51□□□□□ -2.17
Trim35Q8C006 Gm37750-201ENSMUST00000193563 129 ntBASIC1.51□□□□□ -2.17
Trim35Q8C006 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trim35Q8C006 Gm24678-201ENSMUST00000158756 104 ntBASIC1.5□□□□□ -2.17
Trim35Q8C006 Gm44962-201ENSMUST00000206460 279 ntBASIC1.5□□□□□ -2.17
Trim35Q8C006 Gm25495-201ENSMUST00000104431 131 ntBASIC1.49□□□□□ -2.17
Trim35Q8C006 Gm23909-201ENSMUST00000104598 131 ntBASIC1.48□□□□□ -2.17
Trim35Q8C006 Snord32a-201ENSMUST00000083285 83 ntBASIC1.48□□□□□ -2.17
Trim35Q8C006 Gm23410-201ENSMUST00000179967 107 ntBASIC1.47□□□□□ -2.17
Trim35Q8C006 Gm22505-201ENSMUST00000082956 108 ntBASIC1.47□□□□□ -2.17
Trim35Q8C006 Gm22363-201ENSMUST00000083100 108 ntBASIC1.47□□□□□ -2.17
Trim35Q8C006 Gm23814-201ENSMUST00000083230 102 ntBASIC1.47□□□□□ -2.17
Trim35Q8C006 Gm22469-201ENSMUST00000104118 133 ntBASIC1.46□□□□□ -2.18
Trim35Q8C006 Gm24902-201ENSMUST00000158126 123 ntBASIC1.46□□□□□ -2.18
Trim35Q8C006 Gm23967-201ENSMUST00000175062 78 ntBASIC1.46□□□□□ -2.18
Trim35Q8C006 Gm27326-201ENSMUST00000183504 95 ntBASIC1.46□□□□□ -2.18
Trim35Q8C006 Gm26082-201ENSMUST00000104070 127 ntBASIC1.45□□□□□ -2.18
Trim35Q8C006 Gm25831-201ENSMUST00000158924 163 ntBASIC1.45□□□□□ -2.18
Trim35Q8C006 Gm27493-201ENSMUST00000184128 78 ntBASIC1.45□□□□□ -2.18
Trim35Q8C006 Mir6240-201ENSMUST00000184281 117 ntBASIC1.45□□□□□ -2.18
Trim35Q8C006 Gm44490-201ENSMUST00000198566 127 ntBASIC1.45□□□□□ -2.18
Trim35Q8C006 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.44□□□□□ -2.18
Trim35Q8C006 Gm43911-201ENSMUST00000203097 76 ntBASIC1.44□□□□□ -2.18
Trim35Q8C006 Mir200b-201ENSMUST00000083615 70 ntBASIC1.44□□□□□ -2.18
Trim35Q8C006 Mir7065-201ENSMUST00000185110 61 ntBASIC1.43□□□□□ -2.18
Trim35Q8C006 Mir18-201ENSMUST00000083469 96 ntBASIC1.43□□□□□ -2.18
Trim35Q8C006 Mir224-201ENSMUST00000083608 82 ntBASIC1.43□□□□□ -2.18
Trim35Q8C006 Gm22673-201ENSMUST00000104415 131 ntBASIC1.42□□□□□ -2.18
Trim35Q8C006 Gm23558-201ENSMUST00000157823 80 ntBASIC1.42□□□□□ -2.18
Trim35Q8C006 Gm44457-201ENSMUST00000198109 76 ntBASIC1.42□□□□□ -2.18
Trim35Q8C006 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.42□□□□□ -2.18
Trim35Q8C006 Mir6389-201ENSMUST00000183661 102 ntBASIC1.41□□□□□ -2.18
Trim35Q8C006 Gm22602-201ENSMUST00000157596 95 ntBASIC1.4□□□□□ -2.19
Trim35Q8C006 Gm23969-201ENSMUST00000083324 74 ntBASIC1.39□□□□□ -2.19
Trim35Q8C006 Snord35a-201ENSMUST00000083884 90 ntBASIC1.39□□□□□ -2.19
Trim35Q8C006 Mir6962-201ENSMUST00000199512 63 ntBASIC1.38□□□□□ -2.19
Trim35Q8C006 Gm23221-201ENSMUST00000158118 93 ntBASIC1.37□□□□□ -2.19
Trim35Q8C006 Gm23122-201ENSMUST00000157645 103 ntBASIC1.36□□□□□ -2.19
Trim35Q8C006 Mir3968-201ENSMUST00000175355 100 ntBASIC1.35□□□□□ -2.19
Trim35Q8C006 Mir695-201ENSMUST00000102261 109 ntBASIC1.34□□□□□ -2.19
Trim35Q8C006 Gm22559-201ENSMUST00000157329 134 ntBASIC1.34□□□□□ -2.19
Trim35Q8C006 Gm23340-201ENSMUST00000158955 123 ntBASIC1.34□□□□□ -2.19
Trim35Q8C006 Gm25170-201ENSMUST00000104191 129 ntBASIC1.33□□□□□ -2.2
Trim35Q8C006 Snord91a-201ENSMUST00000104305 93 ntBASIC1.33□□□□□ -2.2
Trim35Q8C006 Snord13-201ENSMUST00000157627 104 ntBASIC1.33□□□□□ -2.2
Trim35Q8C006 Mir7665-201ENSMUST00000184907 63 ntBASIC1.33□□□□□ -2.2
Trim35Q8C006 Gm24502-201ENSMUST00000158453 105 ntBASIC1.32□□□□□ -2.2
Trim35Q8C006 Gm27289-201ENSMUST00000183341 82 ntBASIC1.32□□□□□ -2.2
Trim35Q8C006 Gm27894-201ENSMUST00000184177 92 ntBASIC1.32□□□□□ -2.2
Trim35Q8C006 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.32□□□□□ -2.2
Trim35Q8C006 Gm25274-201ENSMUST00000104296 135 ntBASIC1.31□□□□□ -2.2
Trim35Q8C006 Gm24865-201ENSMUST00000103246 96 ntBASIC1.3□□□□□ -2.2
Trim35Q8C006 Gm22197-201ENSMUST00000116866 58 ntBASIC1.3□□□□□ -2.2
Trim35Q8C006 Gm25378-201ENSMUST00000104333 129 ntBASIC1.29□□□□□ -2.2
Trim35Q8C006 Gm23329-201ENSMUST00000157415 108 ntBASIC1.29□□□□□ -2.2
Trim35Q8C006 Mir1954-201ENSMUST00000175595 86 ntBASIC1.29□□□□□ -2.2
Trim35Q8C006 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trim35Q8C006 Snord71-201ENSMUST00000104361 85 ntBASIC1.28□□□□□ -2.2
Trim35Q8C006 Mir367-201ENSMUST00000083479 75 ntBASIC1.28□□□□□ -2.2
Trim35Q8C006 Mir7059-201ENSMUST00000184825 59 ntBASIC1.27□□□□□ -2.21
Trim35Q8C006 Mir28c-201ENSMUST00000200096 75 ntBASIC1.27□□□□□ -2.21
Trim35Q8C006 Gm24342-201ENSMUST00000103907 104 ntBASIC1.26□□□□□ -2.21
Trim35Q8C006 Mir344-201ENSMUST00000083634 95 ntBASIC1.26□□□□□ -2.21
Trim35Q8C006 Mir18b-201ENSMUST00000103923 83 ntBASIC1.25□□□□□ -2.21
Trim35Q8C006 Mir6394-201ENSMUST00000184738 99 ntBASIC1.25□□□□□ -2.21
Trim35Q8C006 Gm44483-201ENSMUST00000197203 97 ntBASIC1.25□□□□□ -2.21
Trim35Q8C006 Mir343-201ENSMUST00000102360 75 ntBASIC1.24□□□□□ -2.21
Trim35Q8C006 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trim35Q8C006 Mir7651-201ENSMUST00000184154 64 ntBASIC1.24□□□□□ -2.21
Trim35Q8C006 Mir7063-201ENSMUST00000184158 91 ntBASIC1.24□□□□□ -2.21
Trim35Q8C006 Gm27656-201ENSMUST00000185055 80 ntBASIC1.24□□□□□ -2.21
Trim35Q8C006 Gm24252-201ENSMUST00000083700 132 ntBASIC1.24□□□□□ -2.21
Trim35Q8C006 Gm24646-201ENSMUST00000157109 99 ntBASIC1.23□□□□□ -2.21
Trim35Q8C006 Gm23328-201ENSMUST00000157418 132 ntBASIC1.23□□□□□ -2.21
Trim35Q8C006 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Trim35Q8C006 Gm22838-201ENSMUST00000158437 99 ntBASIC1.23□□□□□ -2.21
Trim35Q8C006 Gm25143-201ENSMUST00000082696 109 ntBASIC1.23□□□□□ -2.21
Trim35Q8C006 Gm26301-201ENSMUST00000104813 95 ntBASIC1.22□□□□□ -2.21
Trim35Q8C006 Gm27711-201ENSMUST00000183802 118 ntBASIC1.22□□□□□ -2.21
Trim35Q8C006 Snord33-201ENSMUST00000083694 84 ntBASIC1.22□□□□□ -2.21
Trim35Q8C006 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 216.5 ms