Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm24400-201ENSMUST00000157865 107 ntBASIC0.34□□□□□ -2.36
Ubp1Q811S7 Gm22838-201ENSMUST00000158437 99 ntBASIC0.33□□□□□ -2.36
Ubp1Q811S7 Gm25186-201ENSMUST00000083909 108 ntBASIC0.33□□□□□ -2.36
Ubp1Q811S7 Gm24445-201ENSMUST00000083981 107 ntBASIC0.33□□□□□ -2.36
Ubp1Q811S7 Mir717-201ENSMUST00000102259 109 ntBASIC0.32□□□□□ -2.36
Ubp1Q811S7 Mir494-201ENSMUST00000093632 85 ntBASIC0.32□□□□□ -2.36
Ubp1Q811S7 Gm25847-201ENSMUST00000116793 96 ntBASIC0.31□□□□□ -2.36
Ubp1Q811S7 Gm22165-201ENSMUST00000158414 103 ntBASIC0.3□□□□□ -2.36
Ubp1Q811S7 Gm22595-201ENSMUST00000104250 130 ntBASIC0.29□□□□□ -2.36
Ubp1Q811S7 Gm23237-201ENSMUST00000104639 92 ntBASIC0.29□□□□□ -2.36
Ubp1Q811S7 Gm26152-201ENSMUST00000157427 101 ntBASIC0.29□□□□□ -2.36
Ubp1Q811S7 Gm27263-201ENSMUST00000184760 76 ntBASIC0.29□□□□□ -2.36
Ubp1Q811S7 Gm23821-201ENSMUST00000158738 106 ntBASIC0.28□□□□□ -2.36
Ubp1Q811S7 Gm25952-201ENSMUST00000175329 74 ntBASIC0.28□□□□□ -2.36
Ubp1Q811S7 Mir6365-201ENSMUST00000183990 101 ntBASIC0.28□□□□□ -2.36
Ubp1Q811S7 Mir7077-201ENSMUST00000183991 57 ntBASIC0.28□□□□□ -2.36
Ubp1Q811S7 Gm23856-201ENSMUST00000158380 99 ntBASIC0.27□□□□□ -2.37
Ubp1Q811S7 Gm26116-201ENSMUST00000175600 77 ntBASIC0.27□□□□□ -2.37
Ubp1Q811S7 Gm25791-201ENSMUST00000083292 137 ntBASIC0.27□□□□□ -2.37
Ubp1Q811S7 Gm23785-201ENSMUST00000116741 96 ntBASIC0.26□□□□□ -2.37
Ubp1Q811S7 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.26□□□□□ -2.37
Ubp1Q811S7 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.25□□□□□ -2.37
Ubp1Q811S7 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.25□□□□□ -2.37
Ubp1Q811S7 Gm26257-201ENSMUST00000122500 107 ntBASIC0.24□□□□□ -2.37
Ubp1Q811S7 Gm23826-201ENSMUST00000157394 119 ntBASIC0.24□□□□□ -2.37
Ubp1Q811S7 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.24□□□□□ -2.37
Ubp1Q811S7 Gm23180-201ENSMUST00000158686 125 ntBASIC0.23□□□□□ -2.37
Ubp1Q811S7 Gm24331-201ENSMUST00000175099 67 ntBASIC0.23□□□□□ -2.37
Ubp1Q811S7 Gm23801-201ENSMUST00000175561 67 ntBASIC0.23□□□□□ -2.37
Ubp1Q811S7 Gm24485-201ENSMUST00000178283 67 ntBASIC0.23□□□□□ -2.37
Ubp1Q811S7 Mir710-201ENSMUST00000102088 110 ntBASIC0.22□□□□□ -2.37
Ubp1Q811S7 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.22□□□□□ -2.37
Ubp1Q811S7 Gm23994-201ENSMUST00000158059 88 ntBASIC0.22□□□□□ -2.37
Ubp1Q811S7 Mir7651-201ENSMUST00000184154 64 ntBASIC0.22□□□□□ -2.37
Ubp1Q811S7 Gm23159-201ENSMUST00000175088 77 ntBASIC0.21□□□□□ -2.38
Ubp1Q811S7 Gm23017-201ENSMUST00000177583 72 ntBASIC0.2□□□□□ -2.38
Ubp1Q811S7 Gm24201-201ENSMUST00000082946 125 ntBASIC0.2□□□□□ -2.38
Ubp1Q811S7 Gm22717-201ENSMUST00000122703 171 ntBASIC0.19□□□□□ -2.38
Ubp1Q811S7 Gm25375-201ENSMUST00000158157 135 ntBASIC0.19□□□□□ -2.38
Ubp1Q811S7 Gm27607-201ENSMUST00000185162 122 ntBASIC0.19□□□□□ -2.38
Ubp1Q811S7 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.18□□□□□ -2.38
Ubp1Q811S7 Gm25552-201ENSMUST00000158081 91 ntBASIC0.17□□□□□ -2.38
Ubp1Q811S7 Gm26491-201ENSMUST00000179268 121 ntBASIC0.17□□□□□ -2.38
Ubp1Q811S7 Gm38208-201ENSMUST00000192476 114 ntBASIC0.17□□□□□ -2.38
Ubp1Q811S7 Gm25885-201ENSMUST00000157779 109 ntBASIC0.15□□□□□ -2.39
Ubp1Q811S7 Gm22088-201ENSMUST00000158341 117 ntBASIC0.15□□□□□ -2.39
Ubp1Q811S7 Mir3967-201ENSMUST00000198710 68 ntBASIC0.15□□□□□ -2.39
Ubp1Q811S7 Gm29344-201ENSMUST00000068143 210 ntBASIC0.15□□□□□ -2.39
Ubp1Q811S7 Snord85-201ENSMUST00000083262 73 ntBASIC0.15□□□□□ -2.39
Ubp1Q811S7 Gm22368-201ENSMUST00000102416 109 ntBASIC0.14□□□□□ -2.39
Ubp1Q811S7 Mir669f-201ENSMUST00000103850 121 ntBASIC0.14□□□□□ -2.39
Ubp1Q811S7 Gm23531-201ENSMUST00000104567 68 ntBASIC0.14□□□□□ -2.39
Ubp1Q811S7 Gm23278-201ENSMUST00000157911 143 ntBASIC0.14□□□□□ -2.39
Ubp1Q811S7 Gm25648-201ENSMUST00000177844 79 ntBASIC0.12□□□□□ -2.39
Ubp1Q811S7 Gm23649-201ENSMUST00000179007 107 ntBASIC0.12□□□□□ -2.39
Ubp1Q811S7 Gm23442-201ENSMUST00000082919 134 ntBASIC0.12□□□□□ -2.39
Ubp1Q811S7 Gm24843-201ENSMUST00000158682 76 ntBASIC0.11□□□□□ -2.39
Ubp1Q811S7 Gm24467-201ENSMUST00000157887 126 ntBASIC0.1□□□□□ -2.39
Ubp1Q811S7 Gm22048-201ENSMUST00000104721 89 ntBASIC0.09□□□□□ -2.4
Ubp1Q811S7 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.09□□□□□ -2.4
Ubp1Q811S7 Gm27749-201ENSMUST00000183651 125 ntBASIC0.09□□□□□ -2.4
Ubp1Q811S7 Gm25497-201ENSMUST00000104425 132 ntBASIC0.08□□□□□ -2.4
Ubp1Q811S7 Mir3089-201ENSMUST00000175350 84 ntBASIC0.08□□□□□ -2.4
Ubp1Q811S7 Gm44375-201ENSMUST00000196657 150 ntBASIC0.08□□□□□ -2.4
Ubp1Q811S7 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.07□□□□□ -2.4
Ubp1Q811S7 Mir7231-201ENSMUST00000196252 61 ntBASIC0.05□□□□□ -2.4
Ubp1Q811S7 Gm25802-201ENSMUST00000082639 77 ntBASIC0.05□□□□□ -2.4
Ubp1Q811S7 Gm24903-201ENSMUST00000158131 126 ntBASIC0.04□□□□□ -2.4
Ubp1Q811S7 Gm23072-201ENSMUST00000158243 123 ntBASIC0.04□□□□□ -2.4
Ubp1Q811S7 Gm25354-201ENSMUST00000179110 105 ntBASIC0.04□□□□□ -2.4
Ubp1Q811S7 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.04□□□□□ -2.4
Ubp1Q811S7 Gm22298-201ENSMUST00000082662 133 ntBASIC0.04□□□□□ -2.4
Ubp1Q811S7 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Ubp1Q811S7 Gm25183-201ENSMUST00000157752 106 ntBASIC0.02□□□□□ -2.41
Ubp1Q811S7 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Ubp1Q811S7 Gm27450-201ENSMUST00000104632 90 ntBASIC0.01□□□□□ -2.41
Ubp1Q811S7 Gm22077-201ENSMUST00000157594 93 ntBASIC0.01□□□□□ -2.41
Ubp1Q811S7 Gm22327-201ENSMUST00000158899 108 ntBASIC0.01□□□□□ -2.41
Ubp1Q811S7 Snord57-201ENSMUST00000083338 72 ntBASIC0.01□□□□□ -2.41
Ubp1Q811S7 Gm24218-201ENSMUST00000180163 105 ntBASIC0□□□□□ -2.41
Ubp1Q811S7 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Ubp1Q811S7 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.01□□□□□ -2.41
Ubp1Q811S7 Mir327-201ENSMUST00000199328 69 ntBASIC-0.03□□□□□ -2.41
Ubp1Q811S7 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.03□□□□□ -2.41
Ubp1Q811S7 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.04□□□□□ -2.42
Ubp1Q811S7 Mir672-201ENSMUST00000102331 100 ntBASIC-0.05□□□□□ -2.42
Ubp1Q811S7 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Ubp1Q811S7 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.06□□□□□ -2.42
Ubp1Q811S7 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.06□□□□□ -2.42
Ubp1Q811S7 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.06□□□□□ -2.42
Ubp1Q811S7 Mir382-201ENSMUST00000083494 76 ntBASIC-0.06□□□□□ -2.42
Ubp1Q811S7 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.07□□□□□ -2.42
Ubp1Q811S7 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.07□□□□□ -2.42
Ubp1Q811S7 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.07□□□□□ -2.42
Ubp1Q811S7 Mir141-201ENSMUST00000083540 72 ntBASIC-0.07□□□□□ -2.42
Ubp1Q811S7 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.08□□□□□ -2.42
Ubp1Q811S7 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.08□□□□□ -2.42
Ubp1Q811S7 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.08□□□□□ -2.42
Ubp1Q811S7 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.09□□□□□ -2.42
Ubp1Q811S7 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 162 ms