Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm22965-201ENSMUST00000157958 101 ntBASIC0.81□□□□□ -2.28
Trim28Q62318 Gm22542-201ENSMUST00000158166 95 ntBASIC0.81□□□□□ -2.28
Trim28Q62318 Gm25222-201ENSMUST00000158199 126 ntBASIC0.81□□□□□ -2.28
Trim28Q62318 Gm23020-201ENSMUST00000158766 253 ntBASIC0.81□□□□□ -2.28
Trim28Q62318 Gm25326-201ENSMUST00000101903 107 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Gm23494-201ENSMUST00000116830 126 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Gm38113-201ENSMUST00000193704 201 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Mir7229-201ENSMUST00000197062 53 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Mir219b-201ENSMUST00000198317 65 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Gm25802-201ENSMUST00000082639 77 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Gm22303-201ENSMUST00000082686 122 ntBASIC0.8□□□□□ -2.28
Trim28Q62318 Gm24678-201ENSMUST00000158756 104 ntBASIC0.79□□□□□ -2.28
Trim28Q62318 Gm22746-201ENSMUST00000082494 107 ntBASIC0.79□□□□□ -2.28
Trim28Q62318 Snord57-201ENSMUST00000083338 72 ntBASIC0.79□□□□□ -2.28
Trim28Q62318 Gm23126-201ENSMUST00000104260 134 ntBASIC0.78□□□□□ -2.28
Trim28Q62318 Gm23605-201ENSMUST00000157255 127 ntBASIC0.78□□□□□ -2.28
Trim28Q62318 Gm23180-201ENSMUST00000158686 125 ntBASIC0.78□□□□□ -2.28
Trim28Q62318 Gm27289-201ENSMUST00000183341 82 ntBASIC0.78□□□□□ -2.28
Trim28Q62318 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Trim28Q62318 Snora62-201ENSMUST00000082991 149 ntBASIC0.78□□□□□ -2.28
Trim28Q62318 Gm24555-201ENSMUST00000104548 124 ntBASIC0.77□□□□□ -2.29
Trim28Q62318 Mir3105-201ENSMUST00000175480 85 ntBASIC0.77□□□□□ -2.29
Trim28Q62318 Gm25275-201ENSMUST00000104297 129 ntBASIC0.76□□□□□ -2.29
Trim28Q62318 Gm25378-201ENSMUST00000104333 129 ntBASIC0.75□□□□□ -2.29
Trim28Q62318 Mir6389-201ENSMUST00000183661 102 ntBASIC0.75□□□□□ -2.29
Trim28Q62318 Gm24258-201ENSMUST00000083739 133 ntBASIC0.75□□□□□ -2.29
Trim28Q62318 Gm26236-201ENSMUST00000175536 137 ntBASIC0.74□□□□□ -2.29
Trim28Q62318 Gm27943-201ENSMUST00000184844 116 ntBASIC0.74□□□□□ -2.29
Trim28Q62318 Snord33-201ENSMUST00000083694 84 ntBASIC0.74□□□□□ -2.29
Trim28Q62318 Gm25247-201ENSMUST00000175475 90 ntBASIC0.73□□□□□ -2.29
Trim28Q62318 Gm24508-201ENSMUST00000180104 107 ntBASIC0.73□□□□□ -2.29
Trim28Q62318 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.73□□□□□ -2.29
Trim28Q62318 Gm22357-201ENSMUST00000082882 83 ntBASIC0.73□□□□□ -2.29
Trim28Q62318 Mir200a-201ENSMUST00000083466 90 ntBASIC0.73□□□□□ -2.29
Trim28Q62318 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.73□□□□□ -2.29
Trim28Q62318 Snord67-201ENSMUST00000104033 111 ntBASIC0.72□□□□□ -2.29
Trim28Q62318 Gm23321-201ENSMUST00000104465 126 ntBASIC0.72□□□□□ -2.29
Trim28Q62318 Gm24772-201ENSMUST00000158507 110 ntBASIC0.72□□□□□ -2.29
Trim28Q62318 Gm24278-201ENSMUST00000104239 127 ntBASIC0.71□□□□□ -2.3
Trim28Q62318 Gm26259-201ENSMUST00000104778 97 ntBASIC0.71□□□□□ -2.3
Trim28Q62318 Mir216a-201ENSMUST00000083605 72 ntBASIC0.71□□□□□ -2.3
Trim28Q62318 Gm23787-201ENSMUST00000122538 73 ntBASIC0.7□□□□□ -2.3
Trim28Q62318 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.7□□□□□ -2.3
Trim28Q62318 Gm22981-201ENSMUST00000082611 75 ntBASIC0.7□□□□□ -2.3
Trim28Q62318 Gm26484-201ENSMUST00000158018 106 ntBASIC0.69□□□□□ -2.3
Trim28Q62318 Gm27607-201ENSMUST00000185162 122 ntBASIC0.69□□□□□ -2.3
Trim28Q62318 Gm44457-201ENSMUST00000198109 76 ntBASIC0.69□□□□□ -2.3
Trim28Q62318 Gm22302-201ENSMUST00000082657 106 ntBASIC0.69□□□□□ -2.3
Trim28Q62318 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.68□□□□□ -2.3
Trim28Q62318 Gm25408-201ENSMUST00000104104 133 ntBASIC0.67□□□□□ -2.3
Trim28Q62318 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.67□□□□□ -2.3
Trim28Q62318 Gm24531-201ENSMUST00000157945 100 ntBASIC0.66□□□□□ -2.3
Trim28Q62318 Gm26285-201ENSMUST00000177923 107 ntBASIC0.65□□□□□ -2.31
Trim28Q62318 Gm44345-201ENSMUST00000199560 135 ntBASIC0.65□□□□□ -2.31
Trim28Q62318 Gm23622-201ENSMUST00000082460 107 ntBASIC0.65□□□□□ -2.31
Trim28Q62318 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.65□□□□□ -2.31
Trim28Q62318 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trim28Q62318 Gm23969-201ENSMUST00000083324 74 ntBASIC0.64□□□□□ -2.31
Trim28Q62318 Gm25375-201ENSMUST00000158157 135 ntBASIC0.63□□□□□ -2.31
Trim28Q62318 Gm22431-201ENSMUST00000158545 107 ntBASIC0.63□□□□□ -2.31
Trim28Q62318 Gm43432-201ENSMUST00000196352 121 ntBASIC0.63□□□□□ -2.31
Trim28Q62318 Gm44803-201ENSMUST00000204384 156 ntBASIC0.63□□□□□ -2.31
Trim28Q62318 Gm25779-201ENSMUST00000116710 95 ntBASIC0.62□□□□□ -2.31
Trim28Q62318 Gm24884-201ENSMUST00000158784 119 ntBASIC0.62□□□□□ -2.31
Trim28Q62318 Gm24710-201ENSMUST00000175235 101 ntBASIC0.62□□□□□ -2.31
Trim28Q62318 Gm24135-201ENSMUST00000179085 101 ntBASIC0.62□□□□□ -2.31
Trim28Q62318 Gm24218-201ENSMUST00000180163 105 ntBASIC0.62□□□□□ -2.31
Trim28Q62318 Gm6607-201ENSMUST00000215035 328 ntBASIC0.62□□□□□ -2.31
Trim28Q62318 Mir670-201ENSMUST00000102380 100 ntBASIC0.61□□□□□ -2.31
Trim28Q62318 Gm25497-201ENSMUST00000104425 132 ntBASIC0.6□□□□□ -2.31
Trim28Q62318 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Trim28Q62318 Gm37832-201ENSMUST00000118935 189 ntBASIC0.6□□□□□ -2.31
Trim28Q62318 Gm22239-201ENSMUST00000175220 103 ntBASIC0.6□□□□□ -2.31
Trim28Q62318 Gm44828-201ENSMUST00000203745 106 ntBASIC0.6□□□□□ -2.31
Trim28Q62318 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.6□□□□□ -2.31
Trim28Q62318 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.6□□□□□ -2.31
Trim28Q62318 Mir18-201ENSMUST00000083469 96 ntBASIC0.6□□□□□ -2.31
Trim28Q62318 Gm23173-201ENSMUST00000157161 160 ntBASIC0.58□□□□□ -2.32
Trim28Q62318 Gm24963-201ENSMUST00000157916 144 ntBASIC0.58□□□□□ -2.32
Trim28Q62318 Gm25522-201ENSMUST00000158394 105 ntBASIC0.58□□□□□ -2.32
Trim28Q62318 Gm45541-201ENSMUST00000210443 54 ntBASIC0.57□□□□□ -2.32
Trim28Q62318 Gm23240-201ENSMUST00000083009 121 ntBASIC0.57□□□□□ -2.32
Trim28Q62318 Gm26306-201ENSMUST00000157773 119 ntBASIC0.56□□□□□ -2.32
Trim28Q62318 Gm37750-201ENSMUST00000193563 129 ntBASIC0.55□□□□□ -2.32
Trim28Q62318 Gm25791-201ENSMUST00000083292 137 ntBASIC0.55□□□□□ -2.32
Trim28Q62318 Mir669f-201ENSMUST00000103850 121 ntBASIC0.54□□□□□ -2.32
Trim28Q62318 Gm24467-201ENSMUST00000157887 126 ntBASIC0.53□□□□□ -2.32
Trim28Q62318 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.53□□□□□ -2.32
Trim28Q62318 Gm27798-201ENSMUST00000184989 71 ntBASIC0.53□□□□□ -2.32
Trim28Q62318 Gm25886-201ENSMUST00000157780 114 ntBASIC0.52□□□□□ -2.33
Trim28Q62318 Mir142b-201ENSMUST00000083486 115 ntBASIC0.52□□□□□ -2.33
Trim28Q62318 Gm23994-201ENSMUST00000158059 88 ntBASIC0.51□□□□□ -2.33
Trim28Q62318 Gm25158-201ENSMUST00000177681 121 ntBASIC0.51□□□□□ -2.33
Trim28Q62318 Gm26229-201ENSMUST00000179699 121 ntBASIC0.51□□□□□ -2.33
Trim28Q62318 Gm23607-201ENSMUST00000104550 126 ntBASIC0.5□□□□□ -2.33
Trim28Q62318 Gm23531-201ENSMUST00000104567 68 ntBASIC0.5□□□□□ -2.33
Trim28Q62318 Mir3967-201ENSMUST00000198710 68 ntBASIC0.5□□□□□ -2.33
Trim28Q62318 Mir224-201ENSMUST00000083608 82 ntBASIC0.5□□□□□ -2.33
Trim28Q62318 Gm26303-201ENSMUST00000116845 119 ntBASIC0.48□□□□□ -2.33
Trim28Q62318 Gm45617-201ENSMUST00000211132 209 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 186.3 ms