Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.19□□□□□ -2.44
Ift88Q61371 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.19□□□□□ -2.44
Ift88Q61371 Snora62-201ENSMUST00000082991 149 ntBASIC-0.19□□□□□ -2.44
Ift88Q61371 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.2□□□□□ -2.44
Ift88Q61371 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.2□□□□□ -2.44
Ift88Q61371 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.2□□□□□ -2.44
Ift88Q61371 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.21□□□□□ -2.44
Ift88Q61371 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.22□□□□□ -2.44
Ift88Q61371 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.22□□□□□ -2.44
Ift88Q61371 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.22□□□□□ -2.44
Ift88Q61371 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.22□□□□□ -2.44
Ift88Q61371 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.22□□□□□ -2.44
Ift88Q61371 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.22□□□□□ -2.44
Ift88Q61371 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.23□□□□□ -2.45
Ift88Q61371 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.23□□□□□ -2.45
Ift88Q61371 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.23□□□□□ -2.45
Ift88Q61371 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.23□□□□□ -2.45
Ift88Q61371 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.23□□□□□ -2.45
Ift88Q61371 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.24□□□□□ -2.45
Ift88Q61371 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.24□□□□□ -2.45
Ift88Q61371 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.24□□□□□ -2.45
Ift88Q61371 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.24□□□□□ -2.45
Ift88Q61371 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.25□□□□□ -2.45
Ift88Q61371 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.25□□□□□ -2.45
Ift88Q61371 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.26□□□□□ -2.45
Ift88Q61371 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.26□□□□□ -2.45
Ift88Q61371 Mir717-201ENSMUST00000102259 109 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.27□□□□□ -2.45
Ift88Q61371 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.28□□□□□ -2.45
Ift88Q61371 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
Ift88Q61371 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.28□□□□□ -2.45
Ift88Q61371 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.29□□□□□ -2.46
Ift88Q61371 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.29□□□□□ -2.46
Ift88Q61371 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.3□□□□□ -2.46
Ift88Q61371 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.3□□□□□ -2.46
Ift88Q61371 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.31□□□□□ -2.46
Ift88Q61371 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.32□□□□□ -2.46
Ift88Q61371 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.32□□□□□ -2.46
Ift88Q61371 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.32□□□□□ -2.46
Ift88Q61371 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.32□□□□□ -2.46
Ift88Q61371 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.33□□□□□ -2.46
Ift88Q61371 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.33□□□□□ -2.46
Ift88Q61371 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.33□□□□□ -2.46
Ift88Q61371 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.34□□□□□ -2.46
Ift88Q61371 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.34□□□□□ -2.46
Ift88Q61371 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.34□□□□□ -2.46
Ift88Q61371 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.34□□□□□ -2.46
Ift88Q61371 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.35□□□□□ -2.47
Ift88Q61371 Mir876-201ENSMUST00000104659 81 ntBASIC-0.35□□□□□ -2.47
Ift88Q61371 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.35□□□□□ -2.47
Ift88Q61371 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.36□□□□□ -2.47
Ift88Q61371 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Ift88Q61371 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.37□□□□□ -2.47
Ift88Q61371 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.37□□□□□ -2.47
Ift88Q61371 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.38□□□□□ -2.47
Ift88Q61371 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.38□□□□□ -2.47
Ift88Q61371 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.39□□□□□ -2.47
Ift88Q61371 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.39□□□□□ -2.47
Ift88Q61371 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.39□□□□□ -2.47
Ift88Q61371 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.39□□□□□ -2.47
Ift88Q61371 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Ift88Q61371 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.4□□□□□ -2.47
Ift88Q61371 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.4□□□□□ -2.47
Ift88Q61371 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.41□□□□□ -2.48
Ift88Q61371 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Ift88Q61371 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.41□□□□□ -2.48
Ift88Q61371 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.42□□□□□ -2.48
Ift88Q61371 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.42□□□□□ -2.48
Ift88Q61371 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.42□□□□□ -2.48
Ift88Q61371 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.42□□□□□ -2.48
Ift88Q61371 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.43□□□□□ -2.48
Ift88Q61371 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.43□□□□□ -2.48
Ift88Q61371 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.43□□□□□ -2.48
Ift88Q61371 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.43□□□□□ -2.48
Ift88Q61371 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.43□□□□□ -2.48
Ift88Q61371 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.44□□□□□ -2.48
Ift88Q61371 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.44□□□□□ -2.48
Ift88Q61371 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.44□□□□□ -2.48
Ift88Q61371 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.45□□□□□ -2.48
Ift88Q61371 Mir183-201ENSMUST00000083685 70 ntBASIC-0.45□□□□□ -2.48
Ift88Q61371 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.46□□□□□ -2.48
Ift88Q61371 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.46□□□□□ -2.48
Ift88Q61371 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.46□□□□□ -2.48
Ift88Q61371 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.46□□□□□ -2.48
Ift88Q61371 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms