Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.68□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.68□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.68□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22490-201ENSMUST00000157188 119 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22384-201ENSMUST00000158187 104 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25098-201ENSMUST00000177580 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm23356-201ENSMUST00000177610 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24027-201ENSMUST00000177611 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22511-201ENSMUST00000177628 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22630-201ENSMUST00000177781 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm23560-201ENSMUST00000177782 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25462-201ENSMUST00000177833 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm26059-201ENSMUST00000177865 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22255-201ENSMUST00000177933 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25146-201ENSMUST00000177976 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25523-201ENSMUST00000178044 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24585-201ENSMUST00000178104 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22627-201ENSMUST00000178127 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22912-201ENSMUST00000178242 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24866-201ENSMUST00000178338 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22524-201ENSMUST00000178357 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25710-201ENSMUST00000178367 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm23575-201ENSMUST00000178406 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24872-201ENSMUST00000178434 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22449-201ENSMUST00000178924 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24702-201ENSMUST00000178965 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24206-201ENSMUST00000179011 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24528-201ENSMUST00000179164 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22909-201ENSMUST00000179190 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm26334-201ENSMUST00000179403 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25463-201ENSMUST00000179405 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25742-201ENSMUST00000179530 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25209-201ENSMUST00000179576 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm26392-201ENSMUST00000179661 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25230-201ENSMUST00000179740 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm26434-201ENSMUST00000179778 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25741-201ENSMUST00000179825 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24759-201ENSMUST00000179827 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24219-201ENSMUST00000179861 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm23254-201ENSMUST00000097244 79 ntBASIC-1.69□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25322-201ENSMUST00000122556 104 ntBASIC-1.71□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.71□□□□□ -2.68
Trav8d-2Q5R1B6 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.71□□□□□ -2.68
Trav8d-2Q5R1B6 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.72□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.72□□□□□ -2.68
Trav8d-2Q5R1B6 Gm22911-201ENSMUST00000177920 107 ntBASIC-1.72□□□□□ -2.68
Trav8d-2Q5R1B6 Mir6481-201ENSMUST00000184617 110 ntBASIC-1.72□□□□□ -2.68
Trav8d-2Q5R1B6 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.72□□□□□ -2.68
Trav8d-2Q5R1B6 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.73□□□□□ -2.69
Trav8d-2Q5R1B6 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.73□□□□□ -2.69
Trav8d-2Q5R1B6 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.73□□□□□ -2.69
Trav8d-2Q5R1B6 Mir466-201ENSMUST00000093591 73 ntBASIC-1.73□□□□□ -2.69
Trav8d-2Q5R1B6 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.74□□□□□ -2.69
Trav8d-2Q5R1B6 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.74□□□□□ -2.69
Trav8d-2Q5R1B6 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.75□□□□□ -2.69
Trav8d-2Q5R1B6 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.75□□□□□ -2.69
Trav8d-2Q5R1B6 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.76□□□□□ -2.69
Trav8d-2Q5R1B6 Gm23044-201ENSMUST00000157891 100 ntBASIC-1.76□□□□□ -2.69
Trav8d-2Q5R1B6 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.76□□□□□ -2.69
Trav8d-2Q5R1B6 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.76□□□□□ -2.69
Trav8d-2Q5R1B6 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.77□□□□□ -2.69
Trav8d-2Q5R1B6 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.77□□□□□ -2.69
Trav8d-2Q5R1B6 Mir7116-201ENSMUST00000195956 70 ntBASIC-1.77□□□□□ -2.69
Trav8d-2Q5R1B6 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.78□□□□□ -2.69
Trav8d-2Q5R1B6 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.79□□□□□ -2.7
Trav8d-2Q5R1B6 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.79□□□□□ -2.7
Trav8d-2Q5R1B6 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.8□□□□□ -2.7
Trav8d-2Q5R1B6 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.8□□□□□ -2.7
Trav8d-2Q5R1B6 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.8□□□□□ -2.7
Trav8d-2Q5R1B6 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.8□□□□□ -2.7
Trav8d-2Q5R1B6 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.8□□□□□ -2.7
Trav8d-2Q5R1B6 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.81□□□□□ -2.7
Trav8d-2Q5R1B6 Gm24683-201ENSMUST00000104840 88 ntBASIC-1.82□□□□□ -2.7
Trav8d-2Q5R1B6 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.83□□□□□ -2.7
Trav8d-2Q5R1B6 Gm25920-201ENSMUST00000158307 99 ntBASIC-1.84□□□□□ -2.7
Trav8d-2Q5R1B6 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.85□□□□□ -2.71
Trav8d-2Q5R1B6 Mir494-201ENSMUST00000093632 85 ntBASIC-1.85□□□□□ -2.71
Trav8d-2Q5R1B6 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.86□□□□□ -2.71
Trav8d-2Q5R1B6 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.86□□□□□ -2.71
Trav8d-2Q5R1B6 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.87□□□□□ -2.71
Trav8d-2Q5R1B6 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.87□□□□□ -2.71
Trav8d-2Q5R1B6 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.87□□□□□ -2.71
Trav8d-2Q5R1B6 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.88□□□□□ -2.71
Trav8d-2Q5R1B6 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.88□□□□□ -2.71
Trav8d-2Q5R1B6 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.88□□□□□ -2.71
Trav8d-2Q5R1B6 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.88□□□□□ -2.71
Trav8d-2Q5R1B6 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.89□□□□□ -2.71
Trav8d-2Q5R1B6 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.89□□□□□ -2.71
Trav8d-2Q5R1B6 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Gm23790-201ENSMUST00000083013 107 ntBASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Mir122-201ENSMUST00000083468 66 ntBASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.9□□□□□ -2.71
Trav8d-2Q5R1B6 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
Trav8d-2Q5R1B6 Gm26253-201ENSMUST00000122493 103 ntBASIC-1.91□□□□□ -2.72
Trav8d-2Q5R1B6 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.91□□□□□ -2.72
Trav8d-2Q5R1B6 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.91□□□□□ -2.72
Trav8d-2Q5R1B6 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 76,532 protein–RNA pairs in 165.8 ms