Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm25815-201ENSMUST00000082755 107 ntBASIC-0.79□□□□□ -2.54
Trim40Q3UWA4 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.8□□□□□ -2.54
Trim40Q3UWA4 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.8□□□□□ -2.54
Trim40Q3UWA4 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.81□□□□□ -2.54
Trim40Q3UWA4 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.81□□□□□ -2.54
Trim40Q3UWA4 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.82□□□□□ -2.54
Trim40Q3UWA4 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.82□□□□□ -2.54
Trim40Q3UWA4 Gm44385-201ENSMUST00000198781 81 ntBASIC-0.82□□□□□ -2.54
Trim40Q3UWA4 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.83□□□□□ -2.54
Trim40Q3UWA4 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.83□□□□□ -2.54
Trim40Q3UWA4 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.84□□□□□ -2.54
Trim40Q3UWA4 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.84□□□□□ -2.54
Trim40Q3UWA4 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.85□□□□□ -2.55
Trim40Q3UWA4 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.85□□□□□ -2.55
Trim40Q3UWA4 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.85□□□□□ -2.55
Trim40Q3UWA4 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.85□□□□□ -2.55
Trim40Q3UWA4 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.86□□□□□ -2.55
Trim40Q3UWA4 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.87□□□□□ -2.55
Trim40Q3UWA4 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.87□□□□□ -2.55
Trim40Q3UWA4 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.88□□□□□ -2.55
Trim40Q3UWA4 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.88□□□□□ -2.55
Trim40Q3UWA4 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.89□□□□□ -2.55
Trim40Q3UWA4 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.9□□□□□ -2.55
Trim40Q3UWA4 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.9□□□□□ -2.55
Trim40Q3UWA4 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.9□□□□□ -2.55
Trim40Q3UWA4 Gm24586-201ENSMUST00000116695 89 ntBASIC-0.91□□□□□ -2.56
Trim40Q3UWA4 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.91□□□□□ -2.56
Trim40Q3UWA4 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.91□□□□□ -2.56
Trim40Q3UWA4 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.91□□□□□ -2.56
Trim40Q3UWA4 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.92□□□□□ -2.56
Trim40Q3UWA4 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.92□□□□□ -2.56
Trim40Q3UWA4 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.93□□□□□ -2.56
Trim40Q3UWA4 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.93□□□□□ -2.56
Trim40Q3UWA4 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.93□□□□□ -2.56
Trim40Q3UWA4 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.94□□□□□ -2.56
Trim40Q3UWA4 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.94□□□□□ -2.56
Trim40Q3UWA4 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.94□□□□□ -2.56
Trim40Q3UWA4 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.94□□□□□ -2.56
Trim40Q3UWA4 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.95□□□□□ -2.56
Trim40Q3UWA4 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.95□□□□□ -2.56
Trim40Q3UWA4 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.95□□□□□ -2.56
Trim40Q3UWA4 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.95□□□□□ -2.56
Trim40Q3UWA4 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.95□□□□□ -2.56
Trim40Q3UWA4 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.95□□□□□ -2.56
Trim40Q3UWA4 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.96□□□□□ -2.56
Trim40Q3UWA4 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.96□□□□□ -2.56
Trim40Q3UWA4 Gm24482-201ENSMUST00000117005 93 ntBASIC-0.97□□□□□ -2.56
Trim40Q3UWA4 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.97□□□□□ -2.56
Trim40Q3UWA4 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.97□□□□□ -2.56
Trim40Q3UWA4 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.97□□□□□ -2.56
Trim40Q3UWA4 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.98□□□□□ -2.57
Trim40Q3UWA4 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.98□□□□□ -2.57
Trim40Q3UWA4 Gm24410-201ENSMUST00000083433 107 ntBASIC-0.98□□□□□ -2.57
Trim40Q3UWA4 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.99□□□□□ -2.57
Trim40Q3UWA4 Mir677-202ENSMUST00000197076 78 ntBASIC-0.99□□□□□ -2.57
Trim40Q3UWA4 Gm25431-201ENSMUST00000101978 107 ntBASIC-1□□□□□ -2.57
Trim40Q3UWA4 Gm44490-201ENSMUST00000198566 127 ntBASIC-1□□□□□ -2.57
Trim40Q3UWA4 Mir876-201ENSMUST00000104659 81 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Mir136-201ENSMUST00000199494 62 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 n-R5s96-201ENSMUST00000082574 124 ntBASIC-1.02□□□□□ -2.57
Trim40Q3UWA4 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.03□□□□□ -2.57
Trim40Q3UWA4 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.03□□□□□ -2.57
Trim40Q3UWA4 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.04□□□□□ -2.58
Trim40Q3UWA4 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.04□□□□□ -2.58
Trim40Q3UWA4 Mir141-201ENSMUST00000083540 72 ntBASIC-1.04□□□□□ -2.58
Trim40Q3UWA4 Mir702-201ENSMUST00000102285 109 ntBASIC-1.05□□□□□ -2.58
Trim40Q3UWA4 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.05□□□□□ -2.58
Trim40Q3UWA4 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.05□□□□□ -2.58
Trim40Q3UWA4 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.05□□□□□ -2.58
Trim40Q3UWA4 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.05□□□□□ -2.58
Trim40Q3UWA4 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.05□□□□□ -2.58
Trim40Q3UWA4 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.06□□□□□ -2.58
Trim40Q3UWA4 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Trim40Q3UWA4 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.07□□□□□ -2.58
Trim40Q3UWA4 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.07□□□□□ -2.58
Trim40Q3UWA4 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.08□□□□□ -2.58
Trim40Q3UWA4 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.08□□□□□ -2.58
Trim40Q3UWA4 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.08□□□□□ -2.58
Trim40Q3UWA4 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.09□□□□□ -2.58
Trim40Q3UWA4 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.1□□□□□ -2.59
Trim40Q3UWA4 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
Trim40Q3UWA4 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.1□□□□□ -2.59
Trim40Q3UWA4 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.11□□□□□ -2.59
Trim40Q3UWA4 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.12□□□□□ -2.59
Trim40Q3UWA4 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.12□□□□□ -2.59
Trim40Q3UWA4 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.12□□□□□ -2.59
Trim40Q3UWA4 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.12□□□□□ -2.59
Trim40Q3UWA4 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms