Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Mir196b-201ENSMUST00000083509 85 ntBASIC1.26□□□□□ -2.21
Gm28047Q3US59 Mir344-201ENSMUST00000083634 95 ntBASIC1.26□□□□□ -2.21
Gm28047Q3US59 Gm24942-201ENSMUST00000158328 114 ntBASIC1.25□□□□□ -2.21
Gm28047Q3US59 Gm22074-201ENSMUST00000158595 113 ntBASIC1.25□□□□□ -2.21
Gm28047Q3US59 Gm42506-201ENSMUST00000202009 150 ntBASIC1.25□□□□□ -2.21
Gm28047Q3US59 Mir1904-201ENSMUST00000122702 80 ntBASIC1.24□□□□□ -2.21
Gm28047Q3US59 Gm23416-201ENSMUST00000175520 95 ntBASIC1.24□□□□□ -2.21
Gm28047Q3US59 Mir6381-201ENSMUST00000183426 87 ntBASIC1.24□□□□□ -2.21
Gm28047Q3US59 Gm22233-201ENSMUST00000157464 114 ntBASIC1.23□□□□□ -2.21
Gm28047Q3US59 Gm25868-201ENSMUST00000158253 114 ntBASIC1.23□□□□□ -2.21
Gm28047Q3US59 Gm23853-201ENSMUST00000158375 104 ntBASIC1.23□□□□□ -2.21
Gm28047Q3US59 Gm25903-201ENSMUST00000158492 103 ntBASIC1.23□□□□□ -2.21
Gm28047Q3US59 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Gm28047Q3US59 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.22□□□□□ -2.21
Gm28047Q3US59 Mir3079-201ENSMUST00000175428 90 ntBASIC1.22□□□□□ -2.21
Gm28047Q3US59 Gm22565-201ENSMUST00000175540 69 ntBASIC1.22□□□□□ -2.21
Gm28047Q3US59 Gm37832-201ENSMUST00000118935 189 ntBASIC1.21□□□□□ -2.22
Gm28047Q3US59 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.21□□□□□ -2.22
Gm28047Q3US59 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Gm28047Q3US59 Gm24097-201ENSMUST00000178720 107 ntBASIC1.2□□□□□ -2.22
Gm28047Q3US59 Gm25138-201ENSMUST00000083248 136 ntBASIC1.2□□□□□ -2.22
Gm28047Q3US59 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.2□□□□□ -2.22
Gm28047Q3US59 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Gm28047Q3US59 Mir7010-201ENSMUST00000183464 63 ntBASIC1.19□□□□□ -2.22
Gm28047Q3US59 Mir142b-201ENSMUST00000083486 115 ntBASIC1.19□□□□□ -2.22
Gm28047Q3US59 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Gm28047Q3US59 Gm45617-201ENSMUST00000211132 209 ntBASIC1.18□□□□□ -2.22
Gm28047Q3US59 Mir22-201ENSMUST00000083595 95 ntBASIC1.18□□□□□ -2.22
Gm28047Q3US59 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Gm28047Q3US59 Gm24271-201ENSMUST00000102327 111 ntBASIC1.17□□□□□ -2.22
Gm28047Q3US59 Snord67-201ENSMUST00000104033 111 ntBASIC1.17□□□□□ -2.22
Gm28047Q3US59 Gm23607-201ENSMUST00000104550 126 ntBASIC1.17□□□□□ -2.22
Gm28047Q3US59 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Gm28047Q3US59 Mir6896-201ENSMUST00000198033 73 ntBASIC1.17□□□□□ -2.22
Gm28047Q3US59 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.17□□□□□ -2.22
Gm28047Q3US59 Gm25408-201ENSMUST00000104104 133 ntBASIC1.16□□□□□ -2.22
Gm28047Q3US59 Gm25862-201ENSMUST00000158250 129 ntBASIC1.16□□□□□ -2.22
Gm28047Q3US59 Gm37646-201ENSMUST00000191756 111 ntBASIC1.16□□□□□ -2.22
Gm28047Q3US59 AC154832.1-201ENSMUST00000228928 141 ntBASIC1.16□□□□□ -2.22
Gm28047Q3US59 Mir295-201ENSMUST00000104694 69 ntBASIC1.15□□□□□ -2.23
Gm28047Q3US59 Mir7091-201ENSMUST00000184075 79 ntBASIC1.15□□□□□ -2.23
Gm28047Q3US59 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Gm28047Q3US59 Gm24387-201ENSMUST00000104625 90 ntBASIC1.14□□□□□ -2.23
Gm28047Q3US59 Mir363-201ENSMUST00000093598 75 ntBASIC1.14□□□□□ -2.23
Gm28047Q3US59 Mir6380-201ENSMUST00000184334 81 ntBASIC1.13□□□□□ -2.23
Gm28047Q3US59 Gm44455-201ENSMUST00000200061 82 ntBASIC1.13□□□□□ -2.23
Gm28047Q3US59 Mir10b-201ENSMUST00000083566 68 ntBASIC1.13□□□□□ -2.23
Gm28047Q3US59 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.12□□□□□ -2.23
Gm28047Q3US59 Gm25388-201ENSMUST00000157339 151 ntBASIC1.12□□□□□ -2.23
Gm28047Q3US59 Gm23811-201ENSMUST00000175155 84 ntBASIC1.12□□□□□ -2.23
Gm28047Q3US59 Gm25023-201ENSMUST00000082977 107 ntBASIC1.12□□□□□ -2.23
Gm28047Q3US59 Gm25431-201ENSMUST00000101978 107 ntBASIC1.11□□□□□ -2.23
Gm28047Q3US59 Gm22469-201ENSMUST00000104118 133 ntBASIC1.11□□□□□ -2.23
Gm28047Q3US59 Gm23893-201ENSMUST00000158106 134 ntBASIC1.11□□□□□ -2.23
Gm28047Q3US59 Gm25166-201ENSMUST00000158909 111 ntBASIC1.11□□□□□ -2.23
Gm28047Q3US59 Mir7663-201ENSMUST00000183950 61 ntBASIC1.11□□□□□ -2.23
Gm28047Q3US59 Gm22303-201ENSMUST00000082686 122 ntBASIC1.11□□□□□ -2.23
Gm28047Q3US59 Gm25506-201ENSMUST00000104339 70 ntBASIC1.1□□□□□ -2.23
Gm28047Q3US59 Mir7681-201ENSMUST00000184834 72 ntBASIC1.1□□□□□ -2.23
Gm28047Q3US59 Gm22157-201ENSMUST00000158410 104 ntBASIC1.09□□□□□ -2.23
Gm28047Q3US59 Mir466q-201ENSMUST00000175249 76 ntBASIC1.09□□□□□ -2.23
Gm28047Q3US59 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Gm28047Q3US59 Mir702-201ENSMUST00000102285 109 ntBASIC1.07□□□□□ -2.24
Gm28047Q3US59 Mir1948-201ENSMUST00000157325 85 ntBASIC1.07□□□□□ -2.24
Gm28047Q3US59 Gm24777-201ENSMUST00000157644 107 ntBASIC1.07□□□□□ -2.24
Gm28047Q3US59 Gm44345-201ENSMUST00000199560 135 ntBASIC1.07□□□□□ -2.24
Gm28047Q3US59 Gm27943-201ENSMUST00000184844 116 ntBASIC1.06□□□□□ -2.24
Gm28047Q3US59 Snord35a-201ENSMUST00000083884 90 ntBASIC1.06□□□□□ -2.24
Gm28047Q3US59 Gm27974-201ENSMUST00000183415 105 ntBASIC1.05□□□□□ -2.24
Gm28047Q3US59 Gm42533-201ENSMUST00000196247 157 ntBASIC1.05□□□□□ -2.24
Gm28047Q3US59 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Gm28047Q3US59 Gm24431-201ENSMUST00000104073 66 ntBASIC1.04□□□□□ -2.24
Gm28047Q3US59 Mir15a-201ENSMUST00000175266 84 ntBASIC1.04□□□□□ -2.24
Gm28047Q3US59 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.04□□□□□ -2.24
Gm28047Q3US59 Mir669f-201ENSMUST00000103850 121 ntBASIC1.03□□□□□ -2.24
Gm28047Q3US59 Gm22239-201ENSMUST00000175220 103 ntBASIC1.03□□□□□ -2.24
Gm28047Q3US59 Mir3105-201ENSMUST00000175480 85 ntBASIC1.03□□□□□ -2.24
Gm28047Q3US59 Gm27784-201ENSMUST00000184926 113 ntBASIC1.03□□□□□ -2.24
Gm28047Q3US59 Gm22335-201ENSMUST00000157724 99 ntBASIC1.02□□□□□ -2.25
Gm28047Q3US59 Gm23315-201ENSMUST00000158003 109 ntBASIC1.02□□□□□ -2.25
Gm28047Q3US59 Gm26484-201ENSMUST00000158018 106 ntBASIC1.02□□□□□ -2.25
Gm28047Q3US59 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Gm28047Q3US59 Gm25787-201ENSMUST00000104709 92 ntBASIC1.01□□□□□ -2.25
Gm28047Q3US59 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1□□□□□ -2.25
Gm28047Q3US59 Mir7229-201ENSMUST00000197062 53 ntBASIC0.99□□□□□ -2.25
Gm28047Q3US59 Mir33-201ENSMUST00000083531 69 ntBASIC0.99□□□□□ -2.25
Gm28047Q3US59 Mir27b-201ENSMUST00000083541 73 ntBASIC0.99□□□□□ -2.25
Gm28047Q3US59 Gm23008-201ENSMUST00000158946 80 ntBASIC0.98□□□□□ -2.25
Gm28047Q3US59 Gm24258-201ENSMUST00000083739 133 ntBASIC0.98□□□□□ -2.25
Gm28047Q3US59 Gm25683-201ENSMUST00000083940 131 ntBASIC0.98□□□□□ -2.25
Gm28047Q3US59 Mir6364-201ENSMUST00000183396 86 ntBASIC0.97□□□□□ -2.25
Gm28047Q3US59 Gm44347-201ENSMUST00000199602 108 ntBASIC0.97□□□□□ -2.25
Gm28047Q3US59 Gm23909-201ENSMUST00000104598 131 ntBASIC0.95□□□□□ -2.26
Gm28047Q3US59 Gm22197-201ENSMUST00000116866 58 ntBASIC0.95□□□□□ -2.26
Gm28047Q3US59 Gm24884-201ENSMUST00000158784 119 ntBASIC0.95□□□□□ -2.26
Gm28047Q3US59 Gm25995-201ENSMUST00000175396 142 ntBASIC0.95□□□□□ -2.26
Gm28047Q3US59 Mir200a-201ENSMUST00000083466 90 ntBASIC0.95□□□□□ -2.26
Gm28047Q3US59 Snord32a-201ENSMUST00000083285 83 ntBASIC0.94□□□□□ -2.26
Gm28047Q3US59 Gm22689-201ENSMUST00000102452 110 ntBASIC0.93□□□□□ -2.26
Gm28047Q3US59 Gm22602-201ENSMUST00000157596 95 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 155.6 ms