Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Snord71-201ENSMUST00000104361 85 ntBASIC1.17□□□□□ -2.22
Rnf40Q3U319 Gm27289-201ENSMUST00000183341 82 ntBASIC1.17□□□□□ -2.22
Rnf40Q3U319 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.17□□□□□ -2.22
Rnf40Q3U319 Gm25408-201ENSMUST00000104104 133 ntBASIC1.16□□□□□ -2.22
Rnf40Q3U319 Gm24020-201ENSMUST00000180156 108 ntBASIC1.16□□□□□ -2.22
Rnf40Q3U319 Gm27656-201ENSMUST00000185055 80 ntBASIC1.15□□□□□ -2.23
Rnf40Q3U319 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1.15□□□□□ -2.23
Rnf40Q3U319 Gm24651-201ENSMUST00000157107 107 ntBASIC1.14□□□□□ -2.23
Rnf40Q3U319 AC161271.1-201ENSMUST00000226914 150 ntBASIC1.14□□□□□ -2.23
Rnf40Q3U319 Gm25132-201ENSMUST00000082652 107 ntBASIC1.14□□□□□ -2.23
Rnf40Q3U319 Gm25170-201ENSMUST00000104191 129 ntBASIC1.13□□□□□ -2.23
Rnf40Q3U319 Gm22301-201ENSMUST00000082656 107 ntBASIC1.13□□□□□ -2.23
Rnf40Q3U319 Gm22780-201ENSMUST00000104084 132 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm44803-201ENSMUST00000204384 156 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm23240-201ENSMUST00000083009 121 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Mir142b-201ENSMUST00000083486 115 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm24258-201ENSMUST00000083739 133 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm26301-201ENSMUST00000104813 95 ntBASIC1.11□□□□□ -2.23
Rnf40Q3U319 Mir7063-201ENSMUST00000184158 91 ntBASIC1.11□□□□□ -2.23
Rnf40Q3U319 Gm25274-201ENSMUST00000104296 135 ntBASIC1.1□□□□□ -2.23
Rnf40Q3U319 Mir6381-201ENSMUST00000183426 87 ntBASIC1.1□□□□□ -2.23
Rnf40Q3U319 Gm22469-201ENSMUST00000104118 133 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm23340-201ENSMUST00000158955 123 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm23636-201ENSMUST00000175070 95 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm44457-201ENSMUST00000198109 76 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm22981-201ENSMUST00000082611 75 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Mir362-201ENSMUST00000093592 65 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm44490-201ENSMUST00000198566 127 ntBASIC1.08□□□□□ -2.24
Rnf40Q3U319 Mir6389-201ENSMUST00000183661 102 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Mir6394-201ENSMUST00000184738 99 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Gm45617-201ENSMUST00000211132 209 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Gm25683-201ENSMUST00000083940 131 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Gm24431-201ENSMUST00000104073 66 ntBASIC1.06□□□□□ -2.24
Rnf40Q3U319 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1.06□□□□□ -2.24
Rnf40Q3U319 Snord33-201ENSMUST00000083694 84 ntBASIC1.06□□□□□ -2.24
Rnf40Q3U319 Gm25378-201ENSMUST00000104333 129 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm37832-201ENSMUST00000118935 189 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm22260-201ENSMUST00000178643 107 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm22550-201ENSMUST00000179774 107 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Mir6380-201ENSMUST00000184334 81 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Mir3065-201ENSMUST00000198674 87 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm22060-201ENSMUST00000082558 107 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Mir22-201ENSMUST00000083595 95 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm25158-201ENSMUST00000177681 121 ntBASIC1.04□□□□□ -2.24
Rnf40Q3U319 Gm26229-201ENSMUST00000179699 121 ntBASIC1.04□□□□□ -2.24
Rnf40Q3U319 Gm42506-201ENSMUST00000202009 150 ntBASIC1.04□□□□□ -2.24
Rnf40Q3U319 Gm22565-201ENSMUST00000175540 69 ntBASIC1.03□□□□□ -2.24
Rnf40Q3U319 AC124196.2-201ENSMUST00000224835 145 ntBASIC1.03□□□□□ -2.24
Rnf40Q3U319 Mir344-201ENSMUST00000083634 95 ntBASIC1.03□□□□□ -2.24
Rnf40Q3U319 Gm25161-201ENSMUST00000158913 132 ntBASIC1.02□□□□□ -2.25
Rnf40Q3U319 Gm27798-201ENSMUST00000184989 71 ntBASIC1.02□□□□□ -2.25
Rnf40Q3U319 Mir200b-201ENSMUST00000083615 70 ntBASIC1.02□□□□□ -2.25
Rnf40Q3U319 Gm22157-201ENSMUST00000158410 104 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Mir1954-201ENSMUST00000175595 86 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Mir6985-201ENSMUST00000184641 61 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Mir196b-201ENSMUST00000083509 85 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.01□□□□□ -2.25
Rnf40Q3U319 Gm23607-201ENSMUST00000104550 126 ntBASIC1□□□□□ -2.25
Rnf40Q3U319 Mir18-201ENSMUST00000083469 96 ntBASIC1□□□□□ -2.25
Rnf40Q3U319 Gm24342-201ENSMUST00000103907 104 ntBASIC0.99□□□□□ -2.25
Rnf40Q3U319 Gm23969-201ENSMUST00000083324 74 ntBASIC0.99□□□□□ -2.25
Rnf40Q3U319 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Rnf40Q3U319 Gm26227-201ENSMUST00000082510 101 ntBASIC0.97□□□□□ -2.25
Rnf40Q3U319 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.97□□□□□ -2.25
Rnf40Q3U319 Gm24252-201ENSMUST00000083700 132 ntBASIC0.97□□□□□ -2.25
Rnf40Q3U319 Gm37750-201ENSMUST00000193563 129 ntBASIC0.96□□□□□ -2.26
Rnf40Q3U319 Mir224-201ENSMUST00000083608 82 ntBASIC0.96□□□□□ -2.26
Rnf40Q3U319 Gm22689-201ENSMUST00000102452 110 ntBASIC0.95□□□□□ -2.26
Rnf40Q3U319 Gm44301-201ENSMUST00000200362 143 ntBASIC0.95□□□□□ -2.26
Rnf40Q3U319 Mir1948-201ENSMUST00000157325 85 ntBASIC0.94□□□□□ -2.26
Rnf40Q3U319 Mir7663-201ENSMUST00000183950 61 ntBASIC0.94□□□□□ -2.26
Rnf40Q3U319 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.93□□□□□ -2.26
Rnf40Q3U319 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.93□□□□□ -2.26
Rnf40Q3U319 Gm22056-201ENSMUST00000083386 81 ntBASIC0.93□□□□□ -2.26
Rnf40Q3U319 Gm38208-201ENSMUST00000192476 114 ntBASIC0.92□□□□□ -2.26
Rnf40Q3U319 Gm44458-201ENSMUST00000196594 143 ntBASIC0.92□□□□□ -2.26
Rnf40Q3U319 Gm22239-201ENSMUST00000175220 103 ntBASIC0.91□□□□□ -2.26
Rnf40Q3U319 Gm27749-201ENSMUST00000183651 125 ntBASIC0.91□□□□□ -2.26
Rnf40Q3U319 Mir27b-201ENSMUST00000083541 73 ntBASIC0.91□□□□□ -2.26
Rnf40Q3U319 Gm22593-201ENSMUST00000104245 109 ntBASIC0.89□□□□□ -2.27
Rnf40Q3U319 Gm25506-201ENSMUST00000104339 70 ntBASIC0.89□□□□□ -2.27
Rnf40Q3U319 Gm23992-201ENSMUST00000174981 67 ntBASIC0.88□□□□□ -2.27
Rnf40Q3U319 Gm26236-201ENSMUST00000175536 137 ntBASIC0.88□□□□□ -2.27
Rnf40Q3U319 Gm25791-201ENSMUST00000083292 137 ntBASIC0.88□□□□□ -2.27
Rnf40Q3U319 Mir7065-201ENSMUST00000185110 61 ntBASIC0.86□□□□□ -2.27
Rnf40Q3U319 Mir702-201ENSMUST00000102285 109 ntBASIC0.85□□□□□ -2.27
Rnf40Q3U319 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Rnf40Q3U319 Gm20386-201ENSMUST00000174010 132 ntBASIC0.84□□□□□ -2.27
Rnf40Q3U319 Gm38113-201ENSMUST00000193704 201 ntBASIC0.83□□□□□ -2.28
Rnf40Q3U319 Gm45541-201ENSMUST00000210443 54 ntBASIC0.83□□□□□ -2.28
Rnf40Q3U319 Mir10b-201ENSMUST00000083566 68 ntBASIC0.82□□□□□ -2.28
Rnf40Q3U319 Gm24372-201ENSMUST00000104400 110 ntBASIC0.81□□□□□ -2.28
Rnf40Q3U319 Gm25903-201ENSMUST00000158492 103 ntBASIC0.81□□□□□ -2.28
Rnf40Q3U319 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.81□□□□□ -2.28
Rnf40Q3U319 Mir6896-201ENSMUST00000198033 73 ntBASIC0.8□□□□□ -2.28
Rnf40Q3U319 Gm27784-201ENSMUST00000184926 113 ntBASIC0.79□□□□□ -2.28
Rnf40Q3U319 Gm37646-201ENSMUST00000191756 111 ntBASIC0.79□□□□□ -2.28
Rnf40Q3U319 Gm24963-201ENSMUST00000157916 144 ntBASIC0.78□□□□□ -2.28
Rnf40Q3U319 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Rnf40Q3U319 Gm24579-201ENSMUST00000103964 144 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 209.3 ms