Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23494-201ENSMUST00000116830 126 ntBASIC0.78□□□□□ -2.28
Col8a1Q00780 Gm24678-201ENSMUST00000158756 104 ntBASIC0.78□□□□□ -2.28
Col8a1Q00780 Gm27607-201ENSMUST00000185162 122 ntBASIC0.78□□□□□ -2.28
Col8a1Q00780 Gm22746-201ENSMUST00000082494 107 ntBASIC0.78□□□□□ -2.28
Col8a1Q00780 Gm22298-201ENSMUST00000082662 133 ntBASIC0.78□□□□□ -2.28
Col8a1Q00780 Gm25275-201ENSMUST00000104297 129 ntBASIC0.77□□□□□ -2.29
Col8a1Q00780 Gm24020-201ENSMUST00000180156 108 ntBASIC0.77□□□□□ -2.29
Col8a1Q00780 Mir6364-201ENSMUST00000183396 86 ntBASIC0.77□□□□□ -2.29
Col8a1Q00780 Gm44345-201ENSMUST00000199560 135 ntBASIC0.77□□□□□ -2.29
Col8a1Q00780 Gm24278-201ENSMUST00000104239 127 ntBASIC0.76□□□□□ -2.29
Col8a1Q00780 Mir3105-201ENSMUST00000175480 85 ntBASIC0.76□□□□□ -2.29
Col8a1Q00780 Gm24508-201ENSMUST00000180104 107 ntBASIC0.76□□□□□ -2.29
Col8a1Q00780 Gm22455-201ENSMUST00000082580 71 ntBASIC0.76□□□□□ -2.29
Col8a1Q00780 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Col8a1Q00780 Gm25326-201ENSMUST00000101903 107 ntBASIC0.75□□□□□ -2.29
Col8a1Q00780 Gm23180-201ENSMUST00000158686 125 ntBASIC0.75□□□□□ -2.29
Col8a1Q00780 Mir7229-201ENSMUST00000197062 53 ntBASIC0.75□□□□□ -2.29
Col8a1Q00780 Mir695-201ENSMUST00000102261 109 ntBASIC0.74□□□□□ -2.29
Col8a1Q00780 Gm25497-201ENSMUST00000104425 132 ntBASIC0.74□□□□□ -2.29
Col8a1Q00780 Snora62-201ENSMUST00000082991 149 ntBASIC0.74□□□□□ -2.29
Col8a1Q00780 Snord35a-201ENSMUST00000083884 90 ntBASIC0.74□□□□□ -2.29
Col8a1Q00780 Snord67-201ENSMUST00000104033 111 ntBASIC0.73□□□□□ -2.29
Col8a1Q00780 Gm24323-201ENSMUST00000175342 77 ntBASIC0.73□□□□□ -2.29
Col8a1Q00780 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.72□□□□□ -2.29
Col8a1Q00780 Gm26484-201ENSMUST00000158018 106 ntBASIC0.72□□□□□ -2.29
Col8a1Q00780 Gm44301-201ENSMUST00000200362 143 ntBASIC0.72□□□□□ -2.29
Col8a1Q00780 Gm24710-201ENSMUST00000175235 101 ntBASIC0.71□□□□□ -2.3
Col8a1Q00780 Gm24135-201ENSMUST00000179085 101 ntBASIC0.71□□□□□ -2.3
Col8a1Q00780 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.71□□□□□ -2.3
Col8a1Q00780 Gm23573-201ENSMUST00000104408 107 ntBASIC0.7□□□□□ -2.3
Col8a1Q00780 Gm24467-201ENSMUST00000157887 126 ntBASIC0.7□□□□□ -2.3
Col8a1Q00780 Gm24884-201ENSMUST00000158784 119 ntBASIC0.7□□□□□ -2.3
Col8a1Q00780 Gm20386-201ENSMUST00000174010 132 ntBASIC0.7□□□□□ -2.3
Col8a1Q00780 Gm23961-201ENSMUST00000104685 97 ntBASIC0.69□□□□□ -2.3
Col8a1Q00780 Gm23955-201ENSMUST00000157214 100 ntBASIC0.69□□□□□ -2.3
Col8a1Q00780 Gm22689-201ENSMUST00000102452 110 ntBASIC0.68□□□□□ -2.3
Col8a1Q00780 Gm25378-201ENSMUST00000104333 129 ntBASIC0.68□□□□□ -2.3
Col8a1Q00780 Gm26285-201ENSMUST00000177923 107 ntBASIC0.68□□□□□ -2.3
Col8a1Q00780 Gm27289-201ENSMUST00000183341 82 ntBASIC0.68□□□□□ -2.3
Col8a1Q00780 Gm23622-201ENSMUST00000082460 107 ntBASIC0.68□□□□□ -2.3
Col8a1Q00780 Mir669f-201ENSMUST00000103850 121 ntBASIC0.67□□□□□ -2.3
Col8a1Q00780 Gm25408-201ENSMUST00000104104 133 ntBASIC0.67□□□□□ -2.3
Col8a1Q00780 Gm25375-201ENSMUST00000158157 135 ntBASIC0.67□□□□□ -2.3
Col8a1Q00780 Snord33-201ENSMUST00000083694 84 ntBASIC0.67□□□□□ -2.3
Col8a1Q00780 Gm24258-201ENSMUST00000083739 133 ntBASIC0.67□□□□□ -2.3
Col8a1Q00780 Mir670-201ENSMUST00000102380 100 ntBASIC0.66□□□□□ -2.3
Col8a1Q00780 Gm24377-201ENSMUST00000104398 131 ntBASIC0.66□□□□□ -2.3
Col8a1Q00780 Gm26259-201ENSMUST00000104778 97 ntBASIC0.66□□□□□ -2.3
Col8a1Q00780 Gm23605-201ENSMUST00000157255 127 ntBASIC0.66□□□□□ -2.3
Col8a1Q00780 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Col8a1Q00780 Mir362-201ENSMUST00000093592 65 ntBASIC0.66□□□□□ -2.3
Col8a1Q00780 Gm23994-201ENSMUST00000158059 88 ntBASIC0.65□□□□□ -2.31
Col8a1Q00780 Gm44457-201ENSMUST00000198109 76 ntBASIC0.65□□□□□ -2.31
Col8a1Q00780 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.65□□□□□ -2.31
Col8a1Q00780 Gm24297-201ENSMUST00000158300 68 ntBASIC0.64□□□□□ -2.31
Col8a1Q00780 Gm24218-201ENSMUST00000180163 105 ntBASIC0.64□□□□□ -2.31
Col8a1Q00780 Gm38113-201ENSMUST00000193704 201 ntBASIC0.64□□□□□ -2.31
Col8a1Q00780 Gm44803-201ENSMUST00000204384 156 ntBASIC0.64□□□□□ -2.31
Col8a1Q00780 Gm25222-201ENSMUST00000158199 126 ntBASIC0.63□□□□□ -2.31
Col8a1Q00780 Mir6389-201ENSMUST00000183661 102 ntBASIC0.63□□□□□ -2.31
Col8a1Q00780 Gm6607-201ENSMUST00000215035 328 ntBASIC0.63□□□□□ -2.31
Col8a1Q00780 Gm26052-201ENSMUST00000104646 84 ntBASIC0.62□□□□□ -2.31
Col8a1Q00780 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.62□□□□□ -2.31
Col8a1Q00780 Gm22357-201ENSMUST00000082882 83 ntBASIC0.62□□□□□ -2.31
Col8a1Q00780 Mir363-201ENSMUST00000093598 75 ntBASIC0.62□□□□□ -2.31
Col8a1Q00780 Gm25522-201ENSMUST00000158394 105 ntBASIC0.61□□□□□ -2.31
Col8a1Q00780 Mir3065-201ENSMUST00000198674 87 ntBASIC0.61□□□□□ -2.31
Col8a1Q00780 Gm22981-201ENSMUST00000082611 75 ntBASIC0.61□□□□□ -2.31
Col8a1Q00780 Mir6896-201ENSMUST00000198033 73 ntBASIC0.6□□□□□ -2.31
Col8a1Q00780 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.6□□□□□ -2.31
Col8a1Q00780 Gm23173-201ENSMUST00000157161 160 ntBASIC0.59□□□□□ -2.31
Col8a1Q00780 Gm25885-201ENSMUST00000157779 109 ntBASIC0.59□□□□□ -2.31
Col8a1Q00780 Gm23278-201ENSMUST00000157911 143 ntBASIC0.59□□□□□ -2.31
Col8a1Q00780 Mir7065-201ENSMUST00000185110 61 ntBASIC0.59□□□□□ -2.31
Col8a1Q00780 Gm22302-201ENSMUST00000082657 106 ntBASIC0.59□□□□□ -2.31
Col8a1Q00780 Mir18-201ENSMUST00000083469 96 ntBASIC0.58□□□□□ -2.32
Col8a1Q00780 Gm23735-201ENSMUST00000082551 134 ntBASIC0.57□□□□□ -2.32
Col8a1Q00780 Gm22127-201ENSMUST00000083239 106 ntBASIC0.56□□□□□ -2.32
Col8a1Q00780 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.56□□□□□ -2.32
Col8a1Q00780 Gm22088-201ENSMUST00000158341 117 ntBASIC0.55□□□□□ -2.32
Col8a1Q00780 Gm22239-201ENSMUST00000175220 103 ntBASIC0.55□□□□□ -2.32
Col8a1Q00780 Gm23969-201ENSMUST00000083324 74 ntBASIC0.55□□□□□ -2.32
Col8a1Q00780 Gm37750-201ENSMUST00000193563 129 ntBASIC0.54□□□□□ -2.32
Col8a1Q00780 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.54□□□□□ -2.32
Col8a1Q00780 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Col8a1Q00780 Gm26236-201ENSMUST00000175536 137 ntBASIC0.53□□□□□ -2.32
Col8a1Q00780 Mir141-201ENSMUST00000083540 72 ntBASIC0.53□□□□□ -2.32
Col8a1Q00780 Mir216a-201ENSMUST00000083605 72 ntBASIC0.53□□□□□ -2.32
Col8a1Q00780 Mir6904-201ENSMUST00000183443 67 ntBASIC0.52□□□□□ -2.33
Col8a1Q00780 Gm45617-201ENSMUST00000211132 209 ntBASIC0.52□□□□□ -2.33
Col8a1Q00780 Mir224-201ENSMUST00000083608 82 ntBASIC0.52□□□□□ -2.33
Col8a1Q00780 Gm25779-201ENSMUST00000116710 95 ntBASIC0.51□□□□□ -2.33
Col8a1Q00780 Gm24531-201ENSMUST00000157945 100 ntBASIC0.51□□□□□ -2.33
Col8a1Q00780 Gm45541-201ENSMUST00000210443 54 ntBASIC0.51□□□□□ -2.33
Col8a1Q00780 Mir142b-201ENSMUST00000083486 115 ntBASIC0.51□□□□□ -2.33
Col8a1Q00780 Gm23531-201ENSMUST00000104567 68 ntBASIC0.5□□□□□ -2.33
Col8a1Q00780 Gm24963-201ENSMUST00000157916 144 ntBASIC0.5□□□□□ -2.33
Col8a1Q00780 Gm26306-201ENSMUST00000157773 119 ntBASIC0.49□□□□□ -2.33
Col8a1Q00780 Gm23787-201ENSMUST00000122538 73 ntBASIC0.48□□□□□ -2.33
Col8a1Q00780 Mir7077-201ENSMUST00000183991 57 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 199.2 ms