Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm25787-201ENSMUST00000104709 92 ntBASIC0.69□□□□□ -2.3
Nup43P59235 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.69□□□□□ -2.3
Nup43P59235 Gm22981-201ENSMUST00000082611 75 ntBASIC0.69□□□□□ -2.3
Nup43P59235 Snora62-201ENSMUST00000082991 149 ntBASIC0.69□□□□□ -2.3
Nup43P59235 Gm23008-201ENSMUST00000158946 80 ntBASIC0.68□□□□□ -2.3
Nup43P59235 Gm25802-201ENSMUST00000082639 77 ntBASIC0.68□□□□□ -2.3
Nup43P59235 Snord57-201ENSMUST00000083338 72 ntBASIC0.68□□□□□ -2.3
Nup43P59235 Gm24258-201ENSMUST00000083739 133 ntBASIC0.68□□□□□ -2.3
Nup43P59235 Gm24579-201ENSMUST00000103964 144 ntBASIC0.67□□□□□ -2.3
Nup43P59235 Gm24996-201ENSMUST00000158390 99 ntBASIC0.67□□□□□ -2.3
Nup43P59235 Gm22016-201ENSMUST00000158793 114 ntBASIC0.67□□□□□ -2.3
Nup43P59235 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Nup43P59235 Gm24797-201ENSMUST00000178103 107 ntBASIC0.66□□□□□ -2.3
Nup43P59235 Gm20386-201ENSMUST00000174010 132 ntBASIC0.65□□□□□ -2.31
Nup43P59235 Gm22239-201ENSMUST00000175220 103 ntBASIC0.65□□□□□ -2.31
Nup43P59235 Mir7079-201ENSMUST00000184697 69 ntBASIC0.64□□□□□ -2.31
Nup43P59235 Gm38113-201ENSMUST00000193704 201 ntBASIC0.64□□□□□ -2.31
Nup43P59235 Mir18-201ENSMUST00000083469 96 ntBASIC0.64□□□□□ -2.31
Nup43P59235 Gm22401-201ENSMUST00000174927 117 ntBASIC0.63□□□□□ -2.31
Nup43P59235 Mir3065-201ENSMUST00000198674 87 ntBASIC0.63□□□□□ -2.31
Nup43P59235 Gm23126-201ENSMUST00000104260 134 ntBASIC0.62□□□□□ -2.31
Nup43P59235 Gm25161-201ENSMUST00000158913 132 ntBASIC0.62□□□□□ -2.31
Nup43P59235 Gm45541-201ENSMUST00000210443 54 ntBASIC0.62□□□□□ -2.31
Nup43P59235 Gm24323-201ENSMUST00000175342 77 ntBASIC0.61□□□□□ -2.31
Nup43P59235 Gm23969-201ENSMUST00000083324 74 ntBASIC0.61□□□□□ -2.31
Nup43P59235 Gm24259-201ENSMUST00000083740 107 ntBASIC0.61□□□□□ -2.31
Nup43P59235 Gm25524-201ENSMUST00000101821 107 ntBASIC0.6□□□□□ -2.31
Nup43P59235 Gm24555-201ENSMUST00000104548 124 ntBASIC0.6□□□□□ -2.31
Nup43P59235 Gm22965-201ENSMUST00000157958 101 ntBASIC0.6□□□□□ -2.31
Nup43P59235 Gm24723-201ENSMUST00000158233 132 ntBASIC0.59□□□□□ -2.31
Nup43P59235 Gm24963-201ENSMUST00000157916 144 ntBASIC0.58□□□□□ -2.32
Nup43P59235 Mir7065-201ENSMUST00000185110 61 ntBASIC0.58□□□□□ -2.32
Nup43P59235 Gm22746-201ENSMUST00000082494 107 ntBASIC0.58□□□□□ -2.32
Nup43P59235 Gm23783-201ENSMUST00000157941 102 ntBASIC0.57□□□□□ -2.32
Nup43P59235 Gm13577-201ENSMUST00000121365 205 ntBASIC0.56□□□□□ -2.32
Nup43P59235 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.56□□□□□ -2.32
Nup43P59235 Gm25326-201ENSMUST00000101903 107 ntBASIC0.55□□□□□ -2.32
Nup43P59235 Gm26236-201ENSMUST00000175536 137 ntBASIC0.55□□□□□ -2.32
Nup43P59235 Gm37750-201ENSMUST00000193563 129 ntBASIC0.54□□□□□ -2.32
Nup43P59235 Mir216a-201ENSMUST00000083605 72 ntBASIC0.54□□□□□ -2.32
Nup43P59235 Mir224-201ENSMUST00000083608 82 ntBASIC0.54□□□□□ -2.32
Nup43P59235 Gm23573-201ENSMUST00000104408 107 ntBASIC0.53□□□□□ -2.32
Nup43P59235 Gm23955-201ENSMUST00000157214 100 ntBASIC0.53□□□□□ -2.32
Nup43P59235 Gm22340-201ENSMUST00000157717 114 ntBASIC0.53□□□□□ -2.32
Nup43P59235 Gm25522-201ENSMUST00000158394 105 ntBASIC0.52□□□□□ -2.33
Nup43P59235 Gm23180-201ENSMUST00000158686 125 ntBASIC0.52□□□□□ -2.33
Nup43P59235 Gm23630-201ENSMUST00000175292 104 ntBASIC0.52□□□□□ -2.33
Nup43P59235 Gm24445-201ENSMUST00000083981 107 ntBASIC0.52□□□□□ -2.33
Nup43P59235 Gm23321-201ENSMUST00000104465 126 ntBASIC0.51□□□□□ -2.33
Nup43P59235 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.51□□□□□ -2.33
Nup43P59235 Gm25791-201ENSMUST00000083292 137 ntBASIC0.5□□□□□ -2.33
Nup43P59235 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.49□□□□□ -2.33
Nup43P59235 Gm26303-201ENSMUST00000116845 119 ntBASIC0.49□□□□□ -2.33
Nup43P59235 Gm22474-201ENSMUST00000179407 107 ntBASIC0.48□□□□□ -2.33
Nup43P59235 Gm23605-201ENSMUST00000157255 127 ntBASIC0.47□□□□□ -2.33
Nup43P59235 Gm26285-201ENSMUST00000177923 107 ntBASIC0.47□□□□□ -2.33
Nup43P59235 Mir219b-201ENSMUST00000198317 65 ntBASIC0.47□□□□□ -2.33
Nup43P59235 Gm23622-201ENSMUST00000082460 107 ntBASIC0.47□□□□□ -2.33
Nup43P59235 Gm22302-201ENSMUST00000082657 106 ntBASIC0.47□□□□□ -2.33
Nup43P59235 Gm24772-201ENSMUST00000158507 110 ntBASIC0.46□□□□□ -2.34
Nup43P59235 Gm45617-201ENSMUST00000211132 209 ntBASIC0.46□□□□□ -2.34
Nup43P59235 Gm25375-201ENSMUST00000158157 135 ntBASIC0.44□□□□□ -2.34
Nup43P59235 Gm22431-201ENSMUST00000158545 107 ntBASIC0.44□□□□□ -2.34
Nup43P59235 Gm24508-201ENSMUST00000180104 107 ntBASIC0.44□□□□□ -2.34
Nup43P59235 Gm28001-201ENSMUST00000183561 117 ntBASIC0.44□□□□□ -2.34
Nup43P59235 Gm23173-201ENSMUST00000157161 160 ntBASIC0.43□□□□□ -2.34
Nup43P59235 Gm25247-201ENSMUST00000175475 90 ntBASIC0.43□□□□□ -2.34
Nup43P59235 Gm22357-201ENSMUST00000082882 83 ntBASIC0.43□□□□□ -2.34
Nup43P59235 Gm27475-201ENSMUST00000183420 61 ntBASIC0.42□□□□□ -2.34
Nup43P59235 Mir142b-201ENSMUST00000083486 115 ntBASIC0.42□□□□□ -2.34
Nup43P59235 Gm22838-201ENSMUST00000158437 99 ntBASIC0.41□□□□□ -2.34
Nup43P59235 Gm38208-201ENSMUST00000192476 114 ntBASIC0.41□□□□□ -2.34
Nup43P59235 Scarna8-201ENSMUST00000158333 131 ntBASIC0.4□□□□□ -2.35
Nup43P59235 Mir3967-201ENSMUST00000198710 68 ntBASIC0.4□□□□□ -2.35
Nup43P59235 Gm23821-201ENSMUST00000158738 106 ntBASIC0.39□□□□□ -2.35
Nup43P59235 Gm27749-201ENSMUST00000183651 125 ntBASIC0.39□□□□□ -2.35
Nup43P59235 Gm43432-201ENSMUST00000196352 121 ntBASIC0.39□□□□□ -2.35
Nup43P59235 AC160976.1-201ENSMUST00000215092 148 ntBASIC0.39□□□□□ -2.35
Nup43P59235 Gm37832-201ENSMUST00000118935 189 ntBASIC0.38□□□□□ -2.35
Nup43P59235 Gm23159-201ENSMUST00000175088 77 ntBASIC0.38□□□□□ -2.35
Nup43P59235 Gm22759-201ENSMUST00000102276 96 ntBASIC0.37□□□□□ -2.35
Nup43P59235 Gm26052-201ENSMUST00000104646 84 ntBASIC0.37□□□□□ -2.35
Nup43P59235 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Nup43P59235 Gm27607-201ENSMUST00000185162 122 ntBASIC0.37□□□□□ -2.35
Nup43P59235 Gm23442-201ENSMUST00000082919 134 ntBASIC0.37□□□□□ -2.35
Nup43P59235 Gm22157-201ENSMUST00000158410 104 ntBASIC0.36□□□□□ -2.35
Nup43P59235 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Nup43P59235 Gm23961-201ENSMUST00000104685 97 ntBASIC0.35□□□□□ -2.35
Nup43P59235 Gm24710-201ENSMUST00000175235 101 ntBASIC0.35□□□□□ -2.35
Nup43P59235 Gm24135-201ENSMUST00000179085 101 ntBASIC0.35□□□□□ -2.35
Nup43P59235 Mir7651-201ENSMUST00000184154 64 ntBASIC0.35□□□□□ -2.35
Nup43P59235 Gm23531-201ENSMUST00000104567 68 ntBASIC0.34□□□□□ -2.36
Nup43P59235 Gm26116-201ENSMUST00000175600 77 ntBASIC0.34□□□□□ -2.36
Nup43P59235 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Nup43P59235 Gm24377-201ENSMUST00000104398 131 ntBASIC0.33□□□□□ -2.36
Nup43P59235 Gm25222-201ENSMUST00000158199 126 ntBASIC0.33□□□□□ -2.36
Nup43P59235 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.33□□□□□ -2.36
Nup43P59235 Mir7077-201ENSMUST00000183991 57 ntBASIC0.32□□□□□ -2.36
Nup43P59235 Gm27798-201ENSMUST00000184989 71 ntBASIC0.32□□□□□ -2.36
Nup43P59235 Gm23240-201ENSMUST00000083009 121 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms