Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.64□□□□□ -2.51
Traf1P39428 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.64□□□□□ -2.51
Traf1P39428 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.65□□□□□ -2.51
Traf1P39428 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.65□□□□□ -2.51
Traf1P39428 Gm26456-201ENSMUST00000082831 111 ntBASIC-0.65□□□□□ -2.51
Traf1P39428 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.65□□□□□ -2.51
Traf1P39428 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.66□□□□□ -2.52
Traf1P39428 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.66□□□□□ -2.52
Traf1P39428 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.66□□□□□ -2.52
Traf1P39428 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.66□□□□□ -2.52
Traf1P39428 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.66□□□□□ -2.52
Traf1P39428 mt-Tf-201ENSMUST00000082387 68 ntBASIC-0.66□□□□□ -2.52
Traf1P39428 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.67□□□□□ -2.52
Traf1P39428 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.67□□□□□ -2.52
Traf1P39428 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.67□□□□□ -2.52
Traf1P39428 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.67□□□□□ -2.52
Traf1P39428 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.68□□□□□ -2.52
Traf1P39428 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.68□□□□□ -2.52
Traf1P39428 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.68□□□□□ -2.52
Traf1P39428 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.68□□□□□ -2.52
Traf1P39428 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.68□□□□□ -2.52
Traf1P39428 Gm22004-201ENSMUST00000101884 107 ntBASIC-0.69□□□□□ -2.52
Traf1P39428 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.7□□□□□ -2.52
Traf1P39428 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.7□□□□□ -2.52
Traf1P39428 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.7□□□□□ -2.52
Traf1P39428 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.71□□□□□ -2.52
Traf1P39428 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.71□□□□□ -2.52
Traf1P39428 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.71□□□□□ -2.52
Traf1P39428 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.72□□□□□ -2.52
Traf1P39428 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.72□□□□□ -2.52
Traf1P39428 Mir677-202ENSMUST00000197076 78 ntBASIC-0.73□□□□□ -2.53
Traf1P39428 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.73□□□□□ -2.53
Traf1P39428 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.74□□□□□ -2.53
Traf1P39428 Gm25428-201ENSMUST00000157608 114 ntBASIC-0.75□□□□□ -2.53
Traf1P39428 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.75□□□□□ -2.53
Traf1P39428 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.75□□□□□ -2.53
Traf1P39428 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.75□□□□□ -2.53
Traf1P39428 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.75□□□□□ -2.53
Traf1P39428 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.76□□□□□ -2.53
Traf1P39428 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.77□□□□□ -2.53
Traf1P39428 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.77□□□□□ -2.53
Traf1P39428 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.77□□□□□ -2.53
Traf1P39428 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.78□□□□□ -2.53
Traf1P39428 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.78□□□□□ -2.53
Traf1P39428 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Gm22381-201ENSMUST00000158186 107 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.79□□□□□ -2.54
Traf1P39428 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.8□□□□□ -2.54
Traf1P39428 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.8□□□□□ -2.54
Traf1P39428 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.8□□□□□ -2.54
Traf1P39428 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.8□□□□□ -2.54
Traf1P39428 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.8□□□□□ -2.54
Traf1P39428 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.8□□□□□ -2.54
Traf1P39428 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.81□□□□□ -2.54
Traf1P39428 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.81□□□□□ -2.54
Traf1P39428 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.81□□□□□ -2.54
Traf1P39428 Gm25815-201ENSMUST00000082755 107 ntBASIC-0.81□□□□□ -2.54
Traf1P39428 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.82□□□□□ -2.54
Traf1P39428 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.82□□□□□ -2.54
Traf1P39428 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.82□□□□□ -2.54
Traf1P39428 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.83□□□□□ -2.54
Traf1P39428 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.84□□□□□ -2.54
Traf1P39428 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.84□□□□□ -2.54
Traf1P39428 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.85□□□□□ -2.55
Traf1P39428 Mir702-201ENSMUST00000102285 109 ntBASIC-0.85□□□□□ -2.55
Traf1P39428 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.85□□□□□ -2.55
Traf1P39428 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.85□□□□□ -2.55
Traf1P39428 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.85□□□□□ -2.55
Traf1P39428 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.85□□□□□ -2.55
Traf1P39428 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.85□□□□□ -2.55
Traf1P39428 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.86□□□□□ -2.55
Traf1P39428 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.86□□□□□ -2.55
Traf1P39428 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.87□□□□□ -2.55
Traf1P39428 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.87□□□□□ -2.55
Traf1P39428 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.87□□□□□ -2.55
Traf1P39428 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.87□□□□□ -2.55
Traf1P39428 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.87□□□□□ -2.55
Traf1P39428 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
Traf1P39428 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms