Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.54□□□□□ -2.5
Msh3P13705 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.55□□□□□ -2.5
Msh3P13705 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.55□□□□□ -2.5
Msh3P13705 Mir141-201ENSMUST00000083540 72 ntBASIC-0.55□□□□□ -2.5
Msh3P13705 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.56□□□□□ -2.5
Msh3P13705 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.57□□□□□ -2.5
Msh3P13705 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.57□□□□□ -2.5
Msh3P13705 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.57□□□□□ -2.5
Msh3P13705 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.57□□□□□ -2.5
Msh3P13705 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.58□□□□□ -2.5
Msh3P13705 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.59□□□□□ -2.5
Msh3P13705 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.59□□□□□ -2.5
Msh3P13705 Mir183-201ENSMUST00000083685 70 ntBASIC-0.59□□□□□ -2.5
Msh3P13705 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.6□□□□□ -2.51
Msh3P13705 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.6□□□□□ -2.51
Msh3P13705 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.6□□□□□ -2.51
Msh3P13705 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.6□□□□□ -2.51
Msh3P13705 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.61□□□□□ -2.51
Msh3P13705 Mir96-201ENSMUST00000083652 106 ntBASIC-0.61□□□□□ -2.51
Msh3P13705 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.62□□□□□ -2.51
Msh3P13705 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.63□□□□□ -2.51
Msh3P13705 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.63□□□□□ -2.51
Msh3P13705 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.63□□□□□ -2.51
Msh3P13705 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.63□□□□□ -2.51
Msh3P13705 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.64□□□□□ -2.51
Msh3P13705 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.64□□□□□ -2.51
Msh3P13705 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.64□□□□□ -2.51
Msh3P13705 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.65□□□□□ -2.51
Msh3P13705 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.65□□□□□ -2.51
Msh3P13705 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.65□□□□□ -2.51
Msh3P13705 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.65□□□□□ -2.51
Msh3P13705 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.65□□□□□ -2.51
Msh3P13705 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.66□□□□□ -2.52
Msh3P13705 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.67□□□□□ -2.52
Msh3P13705 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.67□□□□□ -2.52
Msh3P13705 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.67□□□□□ -2.52
Msh3P13705 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.68□□□□□ -2.52
Msh3P13705 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.68□□□□□ -2.52
Msh3P13705 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
Msh3P13705 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.68□□□□□ -2.52
Msh3P13705 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.69□□□□□ -2.52
Msh3P13705 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.69□□□□□ -2.52
Msh3P13705 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.69□□□□□ -2.52
Msh3P13705 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.69□□□□□ -2.52
Msh3P13705 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.7□□□□□ -2.52
Msh3P13705 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.71□□□□□ -2.52
Msh3P13705 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.72□□□□□ -2.52
Msh3P13705 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.72□□□□□ -2.52
Msh3P13705 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.72□□□□□ -2.52
Msh3P13705 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.72□□□□□ -2.52
Msh3P13705 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.72□□□□□ -2.52
Msh3P13705 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.73□□□□□ -2.53
Msh3P13705 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.73□□□□□ -2.53
Msh3P13705 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.73□□□□□ -2.53
Msh3P13705 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.73□□□□□ -2.53
Msh3P13705 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.73□□□□□ -2.53
Msh3P13705 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
Msh3P13705 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.74□□□□□ -2.53
Msh3P13705 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.74□□□□□ -2.53
Msh3P13705 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.75□□□□□ -2.53
Msh3P13705 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.75□□□□□ -2.53
Msh3P13705 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.75□□□□□ -2.53
Msh3P13705 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.76□□□□□ -2.53
Msh3P13705 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.76□□□□□ -2.53
Msh3P13705 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.76□□□□□ -2.53
Msh3P13705 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.76□□□□□ -2.53
Msh3P13705 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.76□□□□□ -2.53
Msh3P13705 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.76□□□□□ -2.53
Msh3P13705 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.77□□□□□ -2.53
Msh3P13705 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
Msh3P13705 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.77□□□□□ -2.53
Msh3P13705 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.78□□□□□ -2.53
Msh3P13705 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.79□□□□□ -2.54
Msh3P13705 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.79□□□□□ -2.54
Msh3P13705 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.8□□□□□ -2.54
Msh3P13705 Mir876-201ENSMUST00000104659 81 ntBASIC-0.8□□□□□ -2.54
Msh3P13705 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.8□□□□□ -2.54
Msh3P13705 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.81□□□□□ -2.54
Msh3P13705 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.81□□□□□ -2.54
Msh3P13705 Gm23038-201ENSMUST00000083873 104 ntBASIC-0.81□□□□□ -2.54
Msh3P13705 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.82□□□□□ -2.54
Msh3P13705 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.82□□□□□ -2.54
Msh3P13705 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.82□□□□□ -2.54
Msh3P13705 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.82□□□□□ -2.54
Msh3P13705 Gm22950-201ENSMUST00000082776 107 ntBASIC-0.82□□□□□ -2.54
Msh3P13705 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.82□□□□□ -2.54
Msh3P13705 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.83□□□□□ -2.54
Msh3P13705 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.83□□□□□ -2.54
Msh3P13705 Snord50a-201ENSMUST00000178154 72 ntBASIC-0.83□□□□□ -2.54
Msh3P13705 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.83□□□□□ -2.54
Msh3P13705 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.83□□□□□ -2.54
Msh3P13705 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.83□□□□□ -2.54
Msh3P13705 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms