Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm22981-201ENSMUST00000082611 75 ntBASIC0.83□□□□□ -2.28
Hoxd3P09027 Gm22302-201ENSMUST00000082657 106 ntBASIC0.83□□□□□ -2.28
Hoxd3P09027 Gm24431-201ENSMUST00000104073 66 ntBASIC0.82□□□□□ -2.28
Hoxd3P09027 Gm25779-201ENSMUST00000116710 95 ntBASIC0.82□□□□□ -2.28
Hoxd3P09027 Mir1904-201ENSMUST00000122702 80 ntBASIC0.82□□□□□ -2.28
Hoxd3P09027 Gm44803-201ENSMUST00000204384 156 ntBASIC0.82□□□□□ -2.28
Hoxd3P09027 Gm23893-201ENSMUST00000158106 134 ntBASIC0.81□□□□□ -2.28
Hoxd3P09027 Gm27656-201ENSMUST00000185055 80 ntBASIC0.81□□□□□ -2.28
Hoxd3P09027 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.81□□□□□ -2.28
Hoxd3P09027 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.81□□□□□ -2.28
Hoxd3P09027 Gm24777-201ENSMUST00000157644 107 ntBASIC0.8□□□□□ -2.28
Hoxd3P09027 Gm24020-201ENSMUST00000180156 108 ntBASIC0.8□□□□□ -2.28
Hoxd3P09027 Gm25170-201ENSMUST00000104191 129 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Snord71-201ENSMUST00000104361 85 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Gm22431-201ENSMUST00000158545 107 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Gm25161-201ENSMUST00000158913 132 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Mir7663-201ENSMUST00000183950 61 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Mir22-201ENSMUST00000083595 95 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Mir362-201ENSMUST00000093592 65 ntBASIC0.79□□□□□ -2.28
Hoxd3P09027 Mir670-201ENSMUST00000102380 100 ntBASIC0.78□□□□□ -2.28
Hoxd3P09027 Gm25506-201ENSMUST00000104339 70 ntBASIC0.78□□□□□ -2.28
Hoxd3P09027 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Hoxd3P09027 Gm23340-201ENSMUST00000158955 123 ntBASIC0.78□□□□□ -2.28
Hoxd3P09027 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.78□□□□□ -2.28
Hoxd3P09027 Mir18-201ENSMUST00000083469 96 ntBASIC0.78□□□□□ -2.28
Hoxd3P09027 Gm23347-201ENSMUST00000083823 82 ntBASIC0.78□□□□□ -2.28
Hoxd3P09027 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.78□□□□□ -2.28
Hoxd3P09027 Gm23410-201ENSMUST00000179967 107 ntBASIC0.77□□□□□ -2.29
Hoxd3P09027 Gm22505-201ENSMUST00000082956 108 ntBASIC0.77□□□□□ -2.29
Hoxd3P09027 Gm22363-201ENSMUST00000083100 108 ntBASIC0.77□□□□□ -2.29
Hoxd3P09027 Gm23814-201ENSMUST00000083230 102 ntBASIC0.77□□□□□ -2.29
Hoxd3P09027 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.76□□□□□ -2.29
Hoxd3P09027 Mir27b-201ENSMUST00000083541 73 ntBASIC0.76□□□□□ -2.29
Hoxd3P09027 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Hoxd3P09027 Gm25683-201ENSMUST00000083940 131 ntBASIC0.74□□□□□ -2.29
Hoxd3P09027 Gm44301-201ENSMUST00000200362 143 ntBASIC0.73□□□□□ -2.29
Hoxd3P09027 Mir6394-201ENSMUST00000184738 99 ntBASIC0.72□□□□□ -2.29
Hoxd3P09027 Gm27798-201ENSMUST00000184989 71 ntBASIC0.72□□□□□ -2.29
Hoxd3P09027 Gm37750-201ENSMUST00000193563 129 ntBASIC0.72□□□□□ -2.29
Hoxd3P09027 Gm23969-201ENSMUST00000083324 74 ntBASIC0.72□□□□□ -2.29
Hoxd3P09027 Gm23060-201ENSMUST00000102345 109 ntBASIC0.71□□□□□ -2.3
Hoxd3P09027 Gm22239-201ENSMUST00000175220 103 ntBASIC0.71□□□□□ -2.3
Hoxd3P09027 Gm22565-201ENSMUST00000175540 69 ntBASIC0.71□□□□□ -2.3
Hoxd3P09027 Mir7065-201ENSMUST00000185110 61 ntBASIC0.71□□□□□ -2.3
Hoxd3P09027 Gm42506-201ENSMUST00000202009 150 ntBASIC0.71□□□□□ -2.3
Hoxd3P09027 Gm45617-201ENSMUST00000211132 209 ntBASIC0.71□□□□□ -2.3
Hoxd3P09027 Gm37832-201ENSMUST00000118935 189 ntBASIC0.7□□□□□ -2.3
Hoxd3P09027 Mir6380-201ENSMUST00000184334 81 ntBASIC0.7□□□□□ -2.3
Hoxd3P09027 Gm23240-201ENSMUST00000083009 121 ntBASIC0.7□□□□□ -2.3
Hoxd3P09027 Gm44458-201ENSMUST00000196594 143 ntBASIC0.69□□□□□ -2.3
Hoxd3P09027 Mir1955-201ENSMUST00000158014 98 ntBASIC0.68□□□□□ -2.3
Hoxd3P09027 Mir3065-201ENSMUST00000198674 87 ntBASIC0.68□□□□□ -2.3
Hoxd3P09027 Gm45541-201ENSMUST00000210443 54 ntBASIC0.68□□□□□ -2.3
Hoxd3P09027 Mir142b-201ENSMUST00000083486 115 ntBASIC0.68□□□□□ -2.3
Hoxd3P09027 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Hoxd3P09027 Mir6985-201ENSMUST00000184641 61 ntBASIC0.67□□□□□ -2.3
Hoxd3P09027 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.67□□□□□ -2.3
Hoxd3P09027 Gm24459-201ENSMUST00000082730 86 ntBASIC0.66□□□□□ -2.3
Hoxd3P09027 Mir10b-201ENSMUST00000083566 68 ntBASIC0.66□□□□□ -2.3
Hoxd3P09027 Mir224-201ENSMUST00000083608 82 ntBASIC0.66□□□□□ -2.3
Hoxd3P09027 Gm24342-201ENSMUST00000103907 104 ntBASIC0.64□□□□□ -2.31
Hoxd3P09027 Mir344-201ENSMUST00000083634 95 ntBASIC0.64□□□□□ -2.31
Hoxd3P09027 Gm22157-201ENSMUST00000158410 104 ntBASIC0.63□□□□□ -2.31
Hoxd3P09027 Gm22879-201ENSMUST00000082895 74 ntBASIC0.63□□□□□ -2.31
Hoxd3P09027 Gm22689-201ENSMUST00000102452 110 ntBASIC0.62□□□□□ -2.31
Hoxd3P09027 Gm25158-201ENSMUST00000177681 121 ntBASIC0.62□□□□□ -2.31
Hoxd3P09027 Gm26229-201ENSMUST00000179699 121 ntBASIC0.62□□□□□ -2.31
Hoxd3P09027 Gm22335-201ENSMUST00000157724 99 ntBASIC0.6□□□□□ -2.31
Hoxd3P09027 Mir3109-201ENSMUST00000175301 88 ntBASIC0.6□□□□□ -2.31
Hoxd3P09027 Gm38113-201ENSMUST00000193704 201 ntBASIC0.6□□□□□ -2.31
Hoxd3P09027 Gm23483-201ENSMUST00000104179 108 ntBASIC0.59□□□□□ -2.31
Hoxd3P09027 Gm23008-201ENSMUST00000158946 80 ntBASIC0.59□□□□□ -2.31
Hoxd3P09027 Gm20386-201ENSMUST00000174010 132 ntBASIC0.59□□□□□ -2.31
Hoxd3P09027 Gm26236-201ENSMUST00000175536 137 ntBASIC0.59□□□□□ -2.31
Hoxd3P09027 Gm22301-201ENSMUST00000082656 107 ntBASIC0.59□□□□□ -2.31
Hoxd3P09027 Gm25791-201ENSMUST00000083292 137 ntBASIC0.59□□□□□ -2.31
Hoxd3P09027 Gm23735-201ENSMUST00000082551 134 ntBASIC0.58□□□□□ -2.32
Hoxd3P09027 Mir200b-201ENSMUST00000083615 70 ntBASIC0.58□□□□□ -2.32
Hoxd3P09027 Gm24651-201ENSMUST00000157107 107 ntBASIC0.57□□□□□ -2.32
Hoxd3P09027 Gm24579-201ENSMUST00000103964 144 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm23607-201ENSMUST00000104550 126 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm22838-201ENSMUST00000158437 99 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm22260-201ENSMUST00000178643 107 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm27749-201ENSMUST00000183651 125 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm38208-201ENSMUST00000192476 114 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm44490-201ENSMUST00000198566 127 ntBASIC0.56□□□□□ -2.32
Hoxd3P09027 Gm24323-201ENSMUST00000175342 77 ntBASIC0.55□□□□□ -2.32
Hoxd3P09027 Gm24963-201ENSMUST00000157916 144 ntBASIC0.54□□□□□ -2.32
Hoxd3P09027 Gm27784-201ENSMUST00000184926 113 ntBASIC0.54□□□□□ -2.32
Hoxd3P09027 Mir702-201ENSMUST00000102285 109 ntBASIC0.52□□□□□ -2.33
Hoxd3P09027 Gm13577-201ENSMUST00000121365 205 ntBASIC0.52□□□□□ -2.33
Hoxd3P09027 Mir1948-201ENSMUST00000157325 85 ntBASIC0.52□□□□□ -2.33
Hoxd3P09027 Gm23159-201ENSMUST00000175088 77 ntBASIC0.52□□□□□ -2.33
Hoxd3P09027 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.52□□□□□ -2.33
Hoxd3P09027 Gm28001-201ENSMUST00000183561 117 ntBASIC0.51□□□□□ -2.33
Hoxd3P09027 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Hoxd3P09027 Gm23442-201ENSMUST00000082919 134 ntBASIC0.5□□□□□ -2.33
Hoxd3P09027 Mir216a-201ENSMUST00000083605 72 ntBASIC0.5□□□□□ -2.33
Hoxd3P09027 Mir3967-201ENSMUST00000198710 68 ntBASIC0.49□□□□□ -2.33
Hoxd3P09027 Gm23321-201ENSMUST00000104465 126 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 218.1 ms