Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Mir191-201ENSMUST00000196210 74 ntBASIC-0.25□□□□□ -2.45
Cbx4O55187 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.25□□□□□ -2.45
Cbx4O55187 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.25□□□□□ -2.45
Cbx4O55187 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.26□□□□□ -2.45
Cbx4O55187 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.26□□□□□ -2.45
Cbx4O55187 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.26□□□□□ -2.45
Cbx4O55187 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.26□□□□□ -2.45
Cbx4O55187 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.27□□□□□ -2.45
Cbx4O55187 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.27□□□□□ -2.45
Cbx4O55187 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.27□□□□□ -2.45
Cbx4O55187 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.28□□□□□ -2.45
Cbx4O55187 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.28□□□□□ -2.45
Cbx4O55187 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.28□□□□□ -2.45
Cbx4O55187 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.28□□□□□ -2.45
Cbx4O55187 Mir717-201ENSMUST00000102259 109 ntBASIC-0.29□□□□□ -2.46
Cbx4O55187 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.29□□□□□ -2.46
Cbx4O55187 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.29□□□□□ -2.46
Cbx4O55187 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.29□□□□□ -2.46
Cbx4O55187 Mir214-201ENSMUST00000083582 110 ntBASIC-0.29□□□□□ -2.46
Cbx4O55187 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.3□□□□□ -2.46
Cbx4O55187 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.31□□□□□ -2.46
Cbx4O55187 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.31□□□□□ -2.46
Cbx4O55187 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.31□□□□□ -2.46
Cbx4O55187 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.31□□□□□ -2.46
Cbx4O55187 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.32□□□□□ -2.46
Cbx4O55187 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.32□□□□□ -2.46
Cbx4O55187 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
Cbx4O55187 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.33□□□□□ -2.46
Cbx4O55187 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.34□□□□□ -2.46
Cbx4O55187 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.35□□□□□ -2.47
Cbx4O55187 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.35□□□□□ -2.47
Cbx4O55187 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.35□□□□□ -2.47
Cbx4O55187 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.35□□□□□ -2.47
Cbx4O55187 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.36□□□□□ -2.47
Cbx4O55187 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.36□□□□□ -2.47
Cbx4O55187 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Cbx4O55187 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
Cbx4O55187 Mir141-201ENSMUST00000083540 72 ntBASIC-0.37□□□□□ -2.47
Cbx4O55187 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.38□□□□□ -2.47
Cbx4O55187 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.38□□□□□ -2.47
Cbx4O55187 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.39□□□□□ -2.47
Cbx4O55187 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.39□□□□□ -2.47
Cbx4O55187 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.39□□□□□ -2.47
Cbx4O55187 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Cbx4O55187 Mir876-201ENSMUST00000104659 81 ntBASIC-0.41□□□□□ -2.48
Cbx4O55187 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.41□□□□□ -2.48
Cbx4O55187 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.42□□□□□ -2.48
Cbx4O55187 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.42□□□□□ -2.48
Cbx4O55187 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.42□□□□□ -2.48
Cbx4O55187 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.42□□□□□ -2.48
Cbx4O55187 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.43□□□□□ -2.48
Cbx4O55187 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Cbx4O55187 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.43□□□□□ -2.48
Cbx4O55187 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.43□□□□□ -2.48
Cbx4O55187 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.43□□□□□ -2.48
Cbx4O55187 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Cbx4O55187 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.44□□□□□ -2.48
Cbx4O55187 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.44□□□□□ -2.48
Cbx4O55187 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.44□□□□□ -2.48
Cbx4O55187 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.45□□□□□ -2.48
Cbx4O55187 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.46□□□□□ -2.48
Cbx4O55187 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.46□□□□□ -2.48
Cbx4O55187 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.46□□□□□ -2.48
Cbx4O55187 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.47□□□□□ -2.48
Cbx4O55187 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.47□□□□□ -2.48
Cbx4O55187 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.47□□□□□ -2.48
Cbx4O55187 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.47□□□□□ -2.48
Cbx4O55187 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.47□□□□□ -2.48
Cbx4O55187 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.48□□□□□ -2.49
Cbx4O55187 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.48□□□□□ -2.49
Cbx4O55187 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.48□□□□□ -2.49
Cbx4O55187 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.48□□□□□ -2.49
Cbx4O55187 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.49□□□□□ -2.49
Cbx4O55187 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.49□□□□□ -2.49
Cbx4O55187 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.49□□□□□ -2.49
Cbx4O55187 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
Cbx4O55187 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.51□□□□□ -2.49
Cbx4O55187 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.51□□□□□ -2.49
Cbx4O55187 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.51□□□□□ -2.49
Cbx4O55187 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.52□□□□□ -2.49
Cbx4O55187 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.52□□□□□ -2.49
Cbx4O55187 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.52□□□□□ -2.49
Cbx4O55187 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.53□□□□□ -2.49
Cbx4O55187 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.53□□□□□ -2.49
Cbx4O55187 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.54□□□□□ -2.5
Cbx4O55187 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.54□□□□□ -2.5
Cbx4O55187 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.54□□□□□ -2.5
Cbx4O55187 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.54□□□□□ -2.5
Cbx4O55187 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.55□□□□□ -2.5
Cbx4O55187 Mir183-201ENSMUST00000083685 70 ntBASIC-0.55□□□□□ -2.5
Cbx4O55187 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.56□□□□□ -2.5
Cbx4O55187 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.56□□□□□ -2.5
Cbx4O55187 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.56□□□□□ -2.5
Cbx4O55187 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms