Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.01□□□□□ -2.41
Ptchd4B9EKX1 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Ptchd4B9EKX1 Mir717-201ENSMUST00000102259 109 ntBASIC-0.02□□□□□ -2.41
Ptchd4B9EKX1 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.02□□□□□ -2.41
Ptchd4B9EKX1 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.02□□□□□ -2.41
Ptchd4B9EKX1 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Ptchd4B9EKX1 Mir466l-201ENSMUST00000104866 121 ntBASIC-0.03□□□□□ -2.41
Ptchd4B9EKX1 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.03□□□□□ -2.41
Ptchd4B9EKX1 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.03□□□□□ -2.41
Ptchd4B9EKX1 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.03□□□□□ -2.41
Ptchd4B9EKX1 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.03□□□□□ -2.41
Ptchd4B9EKX1 Gm22033-201ENSMUST00000116947 90 ntBASIC-0.04□□□□□ -2.42
Ptchd4B9EKX1 Mir876-201ENSMUST00000104659 81 ntBASIC-0.05□□□□□ -2.42
Ptchd4B9EKX1 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.05□□□□□ -2.42
Ptchd4B9EKX1 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.05□□□□□ -2.42
Ptchd4B9EKX1 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.05□□□□□ -2.42
Ptchd4B9EKX1 Mir327-201ENSMUST00000199328 69 ntBASIC-0.05□□□□□ -2.42
Ptchd4B9EKX1 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.06□□□□□ -2.42
Ptchd4B9EKX1 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
Ptchd4B9EKX1 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.07□□□□□ -2.42
Ptchd4B9EKX1 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Ptchd4B9EKX1 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.07□□□□□ -2.42
Ptchd4B9EKX1 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.09□□□□□ -2.42
Ptchd4B9EKX1 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.09□□□□□ -2.42
Ptchd4B9EKX1 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.1□□□□□ -2.43
Ptchd4B9EKX1 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.1□□□□□ -2.43
Ptchd4B9EKX1 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.1□□□□□ -2.43
Ptchd4B9EKX1 Gm23293-201ENSMUST00000082552 104 ntBASIC-0.1□□□□□ -2.43
Ptchd4B9EKX1 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.11□□□□□ -2.43
Ptchd4B9EKX1 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.11□□□□□ -2.43
Ptchd4B9EKX1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
Ptchd4B9EKX1 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.12□□□□□ -2.43
Ptchd4B9EKX1 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.12□□□□□ -2.43
Ptchd4B9EKX1 Mir382-201ENSMUST00000083494 76 ntBASIC-0.12□□□□□ -2.43
Ptchd4B9EKX1 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.13□□□□□ -2.43
Ptchd4B9EKX1 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.13□□□□□ -2.43
Ptchd4B9EKX1 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.13□□□□□ -2.43
Ptchd4B9EKX1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Ptchd4B9EKX1 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.14□□□□□ -2.43
Ptchd4B9EKX1 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.14□□□□□ -2.43
Ptchd4B9EKX1 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.14□□□□□ -2.43
Ptchd4B9EKX1 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.14□□□□□ -2.43
Ptchd4B9EKX1 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.15□□□□□ -2.43
Ptchd4B9EKX1 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.15□□□□□ -2.43
Ptchd4B9EKX1 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.15□□□□□ -2.43
Ptchd4B9EKX1 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.16□□□□□ -2.44
Ptchd4B9EKX1 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.16□□□□□ -2.44
Ptchd4B9EKX1 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Ptchd4B9EKX1 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.17□□□□□ -2.44
Ptchd4B9EKX1 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.17□□□□□ -2.44
Ptchd4B9EKX1 Mir494-201ENSMUST00000093632 85 ntBASIC-0.17□□□□□ -2.44
Ptchd4B9EKX1 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.18□□□□□ -2.44
Ptchd4B9EKX1 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.18□□□□□ -2.44
Ptchd4B9EKX1 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.18□□□□□ -2.44
Ptchd4B9EKX1 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.19□□□□□ -2.44
Ptchd4B9EKX1 Gm22095-201ENSMUST00000158984 150 ntBASIC-0.19□□□□□ -2.44
Ptchd4B9EKX1 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.19□□□□□ -2.44
Ptchd4B9EKX1 Mir672-201ENSMUST00000102331 100 ntBASIC-0.2□□□□□ -2.44
Ptchd4B9EKX1 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Ptchd4B9EKX1 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.21□□□□□ -2.44
Ptchd4B9EKX1 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.21□□□□□ -2.44
Ptchd4B9EKX1 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.21□□□□□ -2.44
Ptchd4B9EKX1 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
Ptchd4B9EKX1 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.22□□□□□ -2.44
Ptchd4B9EKX1 Mir141-201ENSMUST00000083540 72 ntBASIC-0.22□□□□□ -2.44
Ptchd4B9EKX1 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.23□□□□□ -2.45
Ptchd4B9EKX1 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.23□□□□□ -2.45
Ptchd4B9EKX1 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.23□□□□□ -2.45
Ptchd4B9EKX1 Mir191-201ENSMUST00000196210 74 ntBASIC-0.23□□□□□ -2.45
Ptchd4B9EKX1 Mir34c-201ENSMUST00000083653 77 ntBASIC-0.23□□□□□ -2.45
Ptchd4B9EKX1 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.24□□□□□ -2.45
Ptchd4B9EKX1 Gm25045-201ENSMUST00000122670 99 ntBASIC-0.25□□□□□ -2.45
Ptchd4B9EKX1 Gm26485-201ENSMUST00000158019 64 ntBASIC-0.25□□□□□ -2.45
Ptchd4B9EKX1 Gm22071-201ENSMUST00000116857 83 ntBASIC-0.26□□□□□ -2.45
Ptchd4B9EKX1 Gm24331-201ENSMUST00000175099 67 ntBASIC-0.26□□□□□ -2.45
Ptchd4B9EKX1 Gm23801-201ENSMUST00000175561 67 ntBASIC-0.26□□□□□ -2.45
Ptchd4B9EKX1 Gm24485-201ENSMUST00000178283 67 ntBASIC-0.26□□□□□ -2.45
Ptchd4B9EKX1 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.26□□□□□ -2.45
Ptchd4B9EKX1 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.27□□□□□ -2.45
Ptchd4B9EKX1 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.28□□□□□ -2.45
Ptchd4B9EKX1 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.28□□□□□ -2.45
Ptchd4B9EKX1 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.28□□□□□ -2.45
Ptchd4B9EKX1 Gm11966-201ENSMUST00000119907 87 ntBASIC-0.29□□□□□ -2.46
Ptchd4B9EKX1 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.3□□□□□ -2.46
Ptchd4B9EKX1 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.31□□□□□ -2.46
Ptchd4B9EKX1 Gm23785-201ENSMUST00000116741 96 ntBASIC-0.31□□□□□ -2.46
Ptchd4B9EKX1 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.31□□□□□ -2.46
Ptchd4B9EKX1 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.31□□□□□ -2.46
Ptchd4B9EKX1 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.31□□□□□ -2.46
Ptchd4B9EKX1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-0.31□□□□□ -2.46
Ptchd4B9EKX1 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.32□□□□□ -2.46
Ptchd4B9EKX1 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.32□□□□□ -2.46
Ptchd4B9EKX1 Mir214-201ENSMUST00000083582 110 ntBASIC-0.32□□□□□ -2.46
Ptchd4B9EKX1 Gm26257-201ENSMUST00000122500 107 ntBASIC-0.33□□□□□ -2.46
Ptchd4B9EKX1 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.33□□□□□ -2.46
Ptchd4B9EKX1 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.34□□□□□ -2.46
Ptchd4B9EKX1 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.34□□□□□ -2.46
Ptchd4B9EKX1 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.34□□□□□ -2.46
Ptchd4B9EKX1 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.35□□□□□ -2.47
Ptchd4B9EKX1 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms