Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm22595-201ENSMUST00000104250 130 ntBASIC-1.21□□□□□ -2.6
Scn3aA2ASI5 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.22□□□□□ -2.6
Scn3aA2ASI5 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.22□□□□□ -2.6
Scn3aA2ASI5 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.23□□□□□ -2.61
Scn3aA2ASI5 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.23□□□□□ -2.61
Scn3aA2ASI5 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.24□□□□□ -2.61
Scn3aA2ASI5 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.24□□□□□ -2.61
Scn3aA2ASI5 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.25□□□□□ -2.61
Scn3aA2ASI5 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.25□□□□□ -2.61
Scn3aA2ASI5 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.25□□□□□ -2.61
Scn3aA2ASI5 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.25□□□□□ -2.61
Scn3aA2ASI5 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.25□□□□□ -2.61
Scn3aA2ASI5 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.26□□□□□ -2.61
Scn3aA2ASI5 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.27□□□□□ -2.61
Scn3aA2ASI5 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.27□□□□□ -2.61
Scn3aA2ASI5 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.27□□□□□ -2.61
Scn3aA2ASI5 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.28□□□□□ -2.61
Scn3aA2ASI5 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.28□□□□□ -2.61
Scn3aA2ASI5 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.28□□□□□ -2.62
Scn3aA2ASI5 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.28□□□□□ -2.62
Scn3aA2ASI5 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.29□□□□□ -2.62
Scn3aA2ASI5 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.29□□□□□ -2.62
Scn3aA2ASI5 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.29□□□□□ -2.62
Scn3aA2ASI5 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.29□□□□□ -2.62
Scn3aA2ASI5 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.29□□□□□ -2.62
Scn3aA2ASI5 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.3□□□□□ -2.62
Scn3aA2ASI5 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.3□□□□□ -2.62
Scn3aA2ASI5 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.31□□□□□ -2.62
Scn3aA2ASI5 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.31□□□□□ -2.62
Scn3aA2ASI5 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.32□□□□□ -2.62
Scn3aA2ASI5 Mir876-201ENSMUST00000104659 81 ntBASIC-1.32□□□□□ -2.62
Scn3aA2ASI5 Gm24683-201ENSMUST00000104840 88 ntBASIC-1.32□□□□□ -2.62
Scn3aA2ASI5 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.32□□□□□ -2.62
Scn3aA2ASI5 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.32□□□□□ -2.62
Scn3aA2ASI5 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.33□□□□□ -2.62
Scn3aA2ASI5 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.33□□□□□ -2.62
Scn3aA2ASI5 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.33□□□□□ -2.62
Scn3aA2ASI5 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.34□□□□□ -2.62
Scn3aA2ASI5 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.34□□□□□ -2.62
Scn3aA2ASI5 Gm22165-201ENSMUST00000158414 103 ntBASIC-1.34□□□□□ -2.62
Scn3aA2ASI5 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.34□□□□□ -2.62
Scn3aA2ASI5 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.34□□□□□ -2.62
Scn3aA2ASI5 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.34□□□□□ -2.62
Scn3aA2ASI5 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.35□□□□□ -2.63
Scn3aA2ASI5 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.35□□□□□ -2.63
Scn3aA2ASI5 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm27263-201ENSMUST00000184760 76 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.36□□□□□ -2.63
Scn3aA2ASI5 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
Scn3aA2ASI5 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
Scn3aA2ASI5 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.37□□□□□ -2.63
Scn3aA2ASI5 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.38□□□□□ -2.63
Scn3aA2ASI5 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.38□□□□□ -2.63
Scn3aA2ASI5 Mir702-201ENSMUST00000102285 109 ntBASIC-1.38□□□□□ -2.63
Scn3aA2ASI5 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.38□□□□□ -2.63
Scn3aA2ASI5 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.39□□□□□ -2.63
Scn3aA2ASI5 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.39□□□□□ -2.63
Scn3aA2ASI5 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.4□□□□□ -2.63
Scn3aA2ASI5 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.41□□□□□ -2.64
Scn3aA2ASI5 Snord57-201ENSMUST00000083338 72 ntBASIC-1.41□□□□□ -2.64
Scn3aA2ASI5 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.43□□□□□ -2.64
Scn3aA2ASI5 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.43□□□□□ -2.64
Scn3aA2ASI5 Snora2b-201ENSMUST00000084005 137 ntBASIC-1.43□□□□□ -2.64
Scn3aA2ASI5 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.44□□□□□ -2.64
Scn3aA2ASI5 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.44□□□□□ -2.64
Scn3aA2ASI5 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 258.9 ms