Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.3□□□□□ -2.46
H2afb1S4R1E0 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.3□□□□□ -2.46
H2afb1S4R1E0 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.3□□□□□ -2.46
H2afb1S4R1E0 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.31□□□□□ -2.46
H2afb1S4R1E0 Gm25322-201ENSMUST00000122556 104 ntBASIC-0.31□□□□□ -2.46
H2afb1S4R1E0 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.31□□□□□ -2.46
H2afb1S4R1E0 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.31□□□□□ -2.46
H2afb1S4R1E0 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.31□□□□□ -2.46
H2afb1S4R1E0 Gm22149-201ENSMUST00000104442 136 ntBASIC-0.33□□□□□ -2.46
H2afb1S4R1E0 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.33□□□□□ -2.46
H2afb1S4R1E0 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.33□□□□□ -2.46
H2afb1S4R1E0 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.33□□□□□ -2.46
H2afb1S4R1E0 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.34□□□□□ -2.46
H2afb1S4R1E0 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.34□□□□□ -2.46
H2afb1S4R1E0 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.34□□□□□ -2.46
H2afb1S4R1E0 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.35□□□□□ -2.47
H2afb1S4R1E0 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.35□□□□□ -2.47
H2afb1S4R1E0 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.35□□□□□ -2.47
H2afb1S4R1E0 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.35□□□□□ -2.47
H2afb1S4R1E0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.35□□□□□ -2.47
H2afb1S4R1E0 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.36□□□□□ -2.47
H2afb1S4R1E0 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.36□□□□□ -2.47
H2afb1S4R1E0 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.36□□□□□ -2.47
H2afb1S4R1E0 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.36□□□□□ -2.47
H2afb1S4R1E0 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.36□□□□□ -2.47
H2afb1S4R1E0 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.36□□□□□ -2.47
H2afb1S4R1E0 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.37□□□□□ -2.47
H2afb1S4R1E0 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.38□□□□□ -2.47
H2afb1S4R1E0 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.38□□□□□ -2.47
H2afb1S4R1E0 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.38□□□□□ -2.47
H2afb1S4R1E0 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.38□□□□□ -2.47
H2afb1S4R1E0 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.38□□□□□ -2.47
H2afb1S4R1E0 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.38□□□□□ -2.47
H2afb1S4R1E0 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.39□□□□□ -2.47
H2afb1S4R1E0 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.39□□□□□ -2.47
H2afb1S4R1E0 Mir672-201ENSMUST00000102331 100 ntBASIC-0.4□□□□□ -2.47
H2afb1S4R1E0 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.4□□□□□ -2.47
H2afb1S4R1E0 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.4□□□□□ -2.47
H2afb1S4R1E0 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.4□□□□□ -2.47
H2afb1S4R1E0 Mir717-201ENSMUST00000102259 109 ntBASIC-0.41□□□□□ -2.48
H2afb1S4R1E0 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.41□□□□□ -2.48
H2afb1S4R1E0 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.42□□□□□ -2.48
H2afb1S4R1E0 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.42□□□□□ -2.48
H2afb1S4R1E0 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.42□□□□□ -2.48
H2afb1S4R1E0 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.42□□□□□ -2.48
H2afb1S4R1E0 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.43□□□□□ -2.48
H2afb1S4R1E0 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.43□□□□□ -2.48
H2afb1S4R1E0 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.43□□□□□ -2.48
H2afb1S4R1E0 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.44□□□□□ -2.48
H2afb1S4R1E0 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.44□□□□□ -2.48
H2afb1S4R1E0 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.45□□□□□ -2.48
H2afb1S4R1E0 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.45□□□□□ -2.48
H2afb1S4R1E0 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.45□□□□□ -2.48
H2afb1S4R1E0 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.45□□□□□ -2.48
H2afb1S4R1E0 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.45□□□□□ -2.48
H2afb1S4R1E0 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.46□□□□□ -2.48
H2afb1S4R1E0 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.47□□□□□ -2.48
H2afb1S4R1E0 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.48□□□□□ -2.49
H2afb1S4R1E0 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.48□□□□□ -2.49
H2afb1S4R1E0 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.48□□□□□ -2.49
H2afb1S4R1E0 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.48□□□□□ -2.49
H2afb1S4R1E0 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.48□□□□□ -2.49
H2afb1S4R1E0 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.49□□□□□ -2.49
H2afb1S4R1E0 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.49□□□□□ -2.49
H2afb1S4R1E0 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.5□□□□□ -2.49
H2afb1S4R1E0 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.5□□□□□ -2.49
H2afb1S4R1E0 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.5□□□□□ -2.49
H2afb1S4R1E0 Mir214-201ENSMUST00000083582 110 ntBASIC-0.5□□□□□ -2.49
H2afb1S4R1E0 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.51□□□□□ -2.49
H2afb1S4R1E0 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.51□□□□□ -2.49
H2afb1S4R1E0 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.51□□□□□ -2.49
H2afb1S4R1E0 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.51□□□□□ -2.49
H2afb1S4R1E0 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.52□□□□□ -2.49
H2afb1S4R1E0 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.52□□□□□ -2.49
H2afb1S4R1E0 Mir191-201ENSMUST00000196210 74 ntBASIC-0.52□□□□□ -2.49
H2afb1S4R1E0 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.52□□□□□ -2.49
H2afb1S4R1E0 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.52□□□□□ -2.49
H2afb1S4R1E0 Mir96-201ENSMUST00000083652 106 ntBASIC-0.52□□□□□ -2.49
H2afb1S4R1E0 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.53□□□□□ -2.49
H2afb1S4R1E0 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.53□□□□□ -2.49
H2afb1S4R1E0 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.53□□□□□ -2.49
H2afb1S4R1E0 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.53□□□□□ -2.49
H2afb1S4R1E0 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.53□□□□□ -2.49
H2afb1S4R1E0 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms