Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.53□□□□□ -2.65
Lima1Q9ERG0 mt-Tt-201ENSMUST00000082422 67 ntBASIC-1.53□□□□□ -2.65
Lima1Q9ERG0 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.54□□□□□ -2.66
Lima1Q9ERG0 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.54□□□□□ -2.66
Lima1Q9ERG0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-1.54□□□□□ -2.66
Lima1Q9ERG0 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.54□□□□□ -2.66
Lima1Q9ERG0 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm25915-201ENSMUST00000104265 126 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm44470-201ENSMUST00000203913 142 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm24134-201ENSMUST00000083361 71 ntBASIC-1.55□□□□□ -2.66
Lima1Q9ERG0 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.56□□□□□ -2.66
Lima1Q9ERG0 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.56□□□□□ -2.66
Lima1Q9ERG0 Gm26092-201ENSMUST00000179798 97 ntBASIC-1.56□□□□□ -2.66
Lima1Q9ERG0 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-1.56□□□□□ -2.66
Lima1Q9ERG0 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.56□□□□□ -2.66
Lima1Q9ERG0 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.57□□□□□ -2.66
Lima1Q9ERG0 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.57□□□□□ -2.66
Lima1Q9ERG0 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.57□□□□□ -2.66
Lima1Q9ERG0 Mir5117-201ENSMUST00000083226 84 ntBASIC-1.57□□□□□ -2.66
Lima1Q9ERG0 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.58□□□□□ -2.66
Lima1Q9ERG0 Gm24835-201ENSMUST00000116777 111 ntBASIC-1.58□□□□□ -2.66
Lima1Q9ERG0 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.58□□□□□ -2.66
Lima1Q9ERG0 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.58□□□□□ -2.66
Lima1Q9ERG0 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
Lima1Q9ERG0 Gm23651-201ENSMUST00000116755 120 ntBASIC-1.59□□□□□ -2.66
Lima1Q9ERG0 Gm20108-201ENSMUST00000219977 153 ntBASIC-1.59□□□□□ -2.66
Lima1Q9ERG0 Gm25410-201ENSMUST00000083758 137 ntBASIC-1.59□□□□□ -2.66
Lima1Q9ERG0 Gm22672-201ENSMUST00000104414 134 ntBASIC-1.6□□□□□ -2.67
Lima1Q9ERG0 Gm26337-201ENSMUST00000178000 79 ntBASIC-1.6□□□□□ -2.67
Lima1Q9ERG0 Mir702-201ENSMUST00000102285 109 ntBASIC-1.61□□□□□ -2.67
Lima1Q9ERG0 Mir543-201ENSMUST00000102286 76 ntBASIC-1.62□□□□□ -2.67
Lima1Q9ERG0 AC166341.8-201ENSMUST00000221267 108 ntBASIC-1.62□□□□□ -2.67
Lima1Q9ERG0 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.62□□□□□ -2.67
Lima1Q9ERG0 Mir741-201ENSMUST00000103931 71 ntBASIC-1.63□□□□□ -2.67
Lima1Q9ERG0 AC161426.1-201ENSMUST00000214137 286 ntBASIC-1.63□□□□□ -2.67
Lima1Q9ERG0 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.64□□□□□ -2.67
Lima1Q9ERG0 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.64□□□□□ -2.67
Lima1Q9ERG0 Mir1898-201ENSMUST00000122643 83 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm23922-201ENSMUST00000178792 79 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm24657-201ENSMUST00000180085 79 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm22996-201ENSMUST00000180236 79 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.65□□□□□ -2.67
Lima1Q9ERG0 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.66□□□□□ -2.68
Lima1Q9ERG0 Gm25316-201ENSMUST00000116826 118 ntBASIC-1.67□□□□□ -2.68
Lima1Q9ERG0 Gm27928-201ENSMUST00000183747 256 ntBASIC-1.67□□□□□ -2.68
Lima1Q9ERG0 Gm42844-201ENSMUST00000200355 112 ntBASIC-1.67□□□□□ -2.68
Lima1Q9ERG0 Gm43038-201ENSMUST00000202359 88 ntBASIC-1.67□□□□□ -2.68
Lima1Q9ERG0 Gm10351-201ENSMUST00000087694 125 ntBASIC-1.67□□□□□ -2.68
Lima1Q9ERG0 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.68□□□□□ -2.68
Lima1Q9ERG0 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.68□□□□□ -2.68
Lima1Q9ERG0 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.69□□□□□ -2.68
Lima1Q9ERG0 Gm24183-201ENSMUST00000122572 93 ntBASIC-1.69□□□□□ -2.68
Lima1Q9ERG0 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.69□□□□□ -2.68
Lima1Q9ERG0 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.69□□□□□ -2.68
Lima1Q9ERG0 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.69□□□□□ -2.68
Lima1Q9ERG0 Gm22205-201ENSMUST00000122655 71 ntBASIC-1.7□□□□□ -2.68
Lima1Q9ERG0 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.7□□□□□ -2.68
Lima1Q9ERG0 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.7□□□□□ -2.68
Lima1Q9ERG0 Gm25440-201ENSMUST00000158279 154 ntBASIC-1.7□□□□□ -2.68
Lima1Q9ERG0 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.7□□□□□ -2.68
Lima1Q9ERG0 Gm25315-201ENSMUST00000116823 121 ntBASIC-1.71□□□□□ -2.68
Lima1Q9ERG0 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.71□□□□□ -2.68
Lima1Q9ERG0 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.71□□□□□ -2.68
Lima1Q9ERG0 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.71□□□□□ -2.68
Lima1Q9ERG0 mt-Td-201ENSMUST00000082404 70 ntBASIC-1.71□□□□□ -2.68
Lima1Q9ERG0 Gm25696-201ENSMUST00000082900 105 ntBASIC-1.72□□□□□ -2.68
Lima1Q9ERG0 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.73□□□□□ -2.69
Lima1Q9ERG0 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.73□□□□□ -2.69
Lima1Q9ERG0 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.73□□□□□ -2.69
Lima1Q9ERG0 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.74□□□□□ -2.69
Lima1Q9ERG0 Snord70-201ENSMUST00000104157 87 ntBASIC-1.75□□□□□ -2.69
Lima1Q9ERG0 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.75□□□□□ -2.69
Lima1Q9ERG0 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.76□□□□□ -2.69
Lima1Q9ERG0 Gm25678-201ENSMUST00000174984 73 ntBASIC-1.76□□□□□ -2.69
Lima1Q9ERG0 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.76□□□□□ -2.69
Lima1Q9ERG0 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.76□□□□□ -2.69
Lima1Q9ERG0 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.77□□□□□ -2.69
Lima1Q9ERG0 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.77□□□□□ -2.69
Lima1Q9ERG0 Gm25229-201ENSMUST00000178587 79 ntBASIC-1.77□□□□□ -2.69
Lima1Q9ERG0 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.78□□□□□ -2.69
Lima1Q9ERG0 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-1.78□□□□□ -2.69
Lima1Q9ERG0 AC164561.1-201ENSMUST00000220414 115 ntBASIC-1.78□□□□□ -2.69
Lima1Q9ERG0 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
Lima1Q9ERG0 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
Lima1Q9ERG0 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.79□□□□□ -2.7
Lima1Q9ERG0 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.79□□□□□ -2.7
Lima1Q9ERG0 Gm23852-201ENSMUST00000158376 77 ntBASIC-1.79□□□□□ -2.7
Lima1Q9ERG0 Gm44859-201ENSMUST00000207831 94 ntBASIC-1.79□□□□□ -2.7
Lima1Q9ERG0 Gm24916-201ENSMUST00000157287 79 ntBASIC-1.8□□□□□ -2.7
Lima1Q9ERG0 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.8□□□□□ -2.7
Lima1Q9ERG0 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 76,532 protein–RNA pairs in 205.3 ms