Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.44□□□□□ -2.48
Ddx28Q9CWT6 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.44□□□□□ -2.48
Ddx28Q9CWT6 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.44□□□□□ -2.48
Ddx28Q9CWT6 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.45□□□□□ -2.48
Ddx28Q9CWT6 Gm22205-201ENSMUST00000122655 71 ntBASIC-0.45□□□□□ -2.48
Ddx28Q9CWT6 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.45□□□□□ -2.48
Ddx28Q9CWT6 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.45□□□□□ -2.48
Ddx28Q9CWT6 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.45□□□□□ -2.48
Ddx28Q9CWT6 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.46□□□□□ -2.48
Ddx28Q9CWT6 Mir5117-201ENSMUST00000083226 84 ntBASIC-0.46□□□□□ -2.48
Ddx28Q9CWT6 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.47□□□□□ -2.48
Ddx28Q9CWT6 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.47□□□□□ -2.48
Ddx28Q9CWT6 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.47□□□□□ -2.48
Ddx28Q9CWT6 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.48□□□□□ -2.49
Ddx28Q9CWT6 Gm25229-201ENSMUST00000178587 79 ntBASIC-0.48□□□□□ -2.49
Ddx28Q9CWT6 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.48□□□□□ -2.49
Ddx28Q9CWT6 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.48□□□□□ -2.49
Ddx28Q9CWT6 Gm26253-201ENSMUST00000122493 103 ntBASIC-0.49□□□□□ -2.49
Ddx28Q9CWT6 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.49□□□□□ -2.49
Ddx28Q9CWT6 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.49□□□□□ -2.49
Ddx28Q9CWT6 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.49□□□□□ -2.49
Ddx28Q9CWT6 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.5□□□□□ -2.49
Ddx28Q9CWT6 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.5□□□□□ -2.49
Ddx28Q9CWT6 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.5□□□□□ -2.49
Ddx28Q9CWT6 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.5□□□□□ -2.49
Ddx28Q9CWT6 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.5□□□□□ -2.49
Ddx28Q9CWT6 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.51□□□□□ -2.49
Ddx28Q9CWT6 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.52□□□□□ -2.49
Ddx28Q9CWT6 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.53□□□□□ -2.49
Ddx28Q9CWT6 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.53□□□□□ -2.49
Ddx28Q9CWT6 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.53□□□□□ -2.49
Ddx28Q9CWT6 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.54□□□□□ -2.5
Ddx28Q9CWT6 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.54□□□□□ -2.5
Ddx28Q9CWT6 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.54□□□□□ -2.5
Ddx28Q9CWT6 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.54□□□□□ -2.5
Ddx28Q9CWT6 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.54□□□□□ -2.5
Ddx28Q9CWT6 Snora62-201ENSMUST00000082991 149 ntBASIC-0.54□□□□□ -2.5
Ddx28Q9CWT6 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.55□□□□□ -2.5
Ddx28Q9CWT6 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.55□□□□□ -2.5
Ddx28Q9CWT6 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.55□□□□□ -2.5
Ddx28Q9CWT6 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.55□□□□□ -2.5
Ddx28Q9CWT6 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.56□□□□□ -2.5
Ddx28Q9CWT6 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.57□□□□□ -2.5
Ddx28Q9CWT6 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.57□□□□□ -2.5
Ddx28Q9CWT6 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.57□□□□□ -2.5
Ddx28Q9CWT6 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.57□□□□□ -2.5
Ddx28Q9CWT6 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.57□□□□□ -2.5
Ddx28Q9CWT6 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.58□□□□□ -2.5
Ddx28Q9CWT6 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.58□□□□□ -2.5
Ddx28Q9CWT6 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.59□□□□□ -2.5
Ddx28Q9CWT6 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.59□□□□□ -2.5
Ddx28Q9CWT6 Gm25322-201ENSMUST00000122556 104 ntBASIC-0.59□□□□□ -2.5
Ddx28Q9CWT6 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.59□□□□□ -2.5
Ddx28Q9CWT6 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.59□□□□□ -2.5
Ddx28Q9CWT6 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.59□□□□□ -2.5
Ddx28Q9CWT6 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.6□□□□□ -2.51
Ddx28Q9CWT6 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.6□□□□□ -2.51
Ddx28Q9CWT6 Gm44385-201ENSMUST00000198781 81 ntBASIC-0.61□□□□□ -2.51
Ddx28Q9CWT6 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.61□□□□□ -2.51
Ddx28Q9CWT6 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.61□□□□□ -2.51
Ddx28Q9CWT6 Gm26456-201ENSMUST00000082831 111 ntBASIC-0.61□□□□□ -2.51
Ddx28Q9CWT6 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.61□□□□□ -2.51
Ddx28Q9CWT6 Mir183-201ENSMUST00000083685 70 ntBASIC-0.61□□□□□ -2.51
Ddx28Q9CWT6 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.62□□□□□ -2.51
Ddx28Q9CWT6 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.62□□□□□ -2.51
Ddx28Q9CWT6 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.62□□□□□ -2.51
Ddx28Q9CWT6 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.62□□□□□ -2.51
Ddx28Q9CWT6 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.63□□□□□ -2.51
Ddx28Q9CWT6 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.63□□□□□ -2.51
Ddx28Q9CWT6 Mir96-201ENSMUST00000083652 106 ntBASIC-0.63□□□□□ -2.51
Ddx28Q9CWT6 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.64□□□□□ -2.51
Ddx28Q9CWT6 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.64□□□□□ -2.51
Ddx28Q9CWT6 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.64□□□□□ -2.51
Ddx28Q9CWT6 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.65□□□□□ -2.51
Ddx28Q9CWT6 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.65□□□□□ -2.51
Ddx28Q9CWT6 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.65□□□□□ -2.51
Ddx28Q9CWT6 Gm24162-201ENSMUST00000093665 102 ntBASIC-0.65□□□□□ -2.51
Ddx28Q9CWT6 Mir741-201ENSMUST00000103931 71 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 187.5 ms