Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.77□□□□□ -2.29
Nkx6-1Q99MA9 Gm22067-201ENSMUST00000122790 107 ntBASIC0.76□□□□□ -2.29
Nkx6-1Q99MA9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.76□□□□□ -2.29
Nkx6-1Q99MA9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.76□□□□□ -2.29
Nkx6-1Q99MA9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.75□□□□□ -2.29
Nkx6-1Q99MA9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.75□□□□□ -2.29
Nkx6-1Q99MA9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.75□□□□□ -2.29
Nkx6-1Q99MA9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.74□□□□□ -2.29
Nkx6-1Q99MA9 Gm25375-201ENSMUST00000158157 135 ntBASIC0.74□□□□□ -2.29
Nkx6-1Q99MA9 Gm22540-201ENSMUST00000158168 117 ntBASIC0.74□□□□□ -2.29
Nkx6-1Q99MA9 Gm25993-201ENSMUST00000175391 80 ntBASIC0.74□□□□□ -2.29
Nkx6-1Q99MA9 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Nkx6-1Q99MA9 Gm22542-201ENSMUST00000158166 95 ntBASIC0.73□□□□□ -2.29
Nkx6-1Q99MA9 Gm25307-201ENSMUST00000158885 106 ntBASIC0.73□□□□□ -2.29
Nkx6-1Q99MA9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Nkx6-1Q99MA9 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.72□□□□□ -2.29
Nkx6-1Q99MA9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.71□□□□□ -2.3
Nkx6-1Q99MA9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.71□□□□□ -2.3
Nkx6-1Q99MA9 Mir7673-201ENSMUST00000184567 64 ntBASIC0.71□□□□□ -2.3
Nkx6-1Q99MA9 Gm23761-201ENSMUST00000158347 104 ntBASIC0.7□□□□□ -2.3
Nkx6-1Q99MA9 Gm23726-201ENSMUST00000178937 67 ntBASIC0.7□□□□□ -2.3
Nkx6-1Q99MA9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.7□□□□□ -2.3
Nkx6-1Q99MA9 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Nkx6-1Q99MA9 Gm22720-201ENSMUST00000122710 87 ntBASIC0.69□□□□□ -2.3
Nkx6-1Q99MA9 Mir3064-201ENSMUST00000175532 67 ntBASIC0.69□□□□□ -2.3
Nkx6-1Q99MA9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.69□□□□□ -2.3
Nkx6-1Q99MA9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.69□□□□□ -2.3
Nkx6-1Q99MA9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.69□□□□□ -2.3
Nkx6-1Q99MA9 Gm26007-201ENSMUST00000158798 120 ntBASIC0.68□□□□□ -2.3
Nkx6-1Q99MA9 Gm22095-201ENSMUST00000158984 150 ntBASIC0.68□□□□□ -2.3
Nkx6-1Q99MA9 Gm27937-201ENSMUST00000183605 88 ntBASIC0.68□□□□□ -2.3
Nkx6-1Q99MA9 Gm20305-201ENSMUST00000193226 177 ntBASIC0.68□□□□□ -2.3
Nkx6-1Q99MA9 Gm25296-201ENSMUST00000082566 67 ntBASIC0.68□□□□□ -2.3
Nkx6-1Q99MA9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.68□□□□□ -2.3
Nkx6-1Q99MA9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.67□□□□□ -2.3
Nkx6-1Q99MA9 Gm24378-201ENSMUST00000122699 106 ntBASIC0.67□□□□□ -2.3
Nkx6-1Q99MA9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.67□□□□□ -2.3
Nkx6-1Q99MA9 Gm27554-201ENSMUST00000185074 98 ntBASIC0.67□□□□□ -2.3
Nkx6-1Q99MA9 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 Gm23020-201ENSMUST00000158766 253 ntBASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 Gm25641-201ENSMUST00000175135 108 ntBASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.66□□□□□ -2.3
Nkx6-1Q99MA9 Mir876-201ENSMUST00000104659 81 ntBASIC0.65□□□□□ -2.31
Nkx6-1Q99MA9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.65□□□□□ -2.31
Nkx6-1Q99MA9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.31
Nkx6-1Q99MA9 Mir141-201ENSMUST00000083540 72 ntBASIC0.65□□□□□ -2.31
Nkx6-1Q99MA9 Mir670-201ENSMUST00000102380 100 ntBASIC0.64□□□□□ -2.31
Nkx6-1Q99MA9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.64□□□□□ -2.31
Nkx6-1Q99MA9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.64□□□□□ -2.31
Nkx6-1Q99MA9 Gm24918-201ENSMUST00000083022 130 ntBASIC0.64□□□□□ -2.31
Nkx6-1Q99MA9 Gm23477-201ENSMUST00000158882 128 ntBASIC0.63□□□□□ -2.31
Nkx6-1Q99MA9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.63□□□□□ -2.31
Nkx6-1Q99MA9 Gm27977-201ENSMUST00000185159 111 ntBASIC0.63□□□□□ -2.31
Nkx6-1Q99MA9 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.63□□□□□ -2.31
Nkx6-1Q99MA9 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.63□□□□□ -2.31
Nkx6-1Q99MA9 Gm22459-201ENSMUST00000082577 108 ntBASIC0.63□□□□□ -2.31
Nkx6-1Q99MA9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.62□□□□□ -2.31
Nkx6-1Q99MA9 Gm24963-201ENSMUST00000157916 144 ntBASIC0.62□□□□□ -2.31
Nkx6-1Q99MA9 Gm24884-201ENSMUST00000158784 119 ntBASIC0.62□□□□□ -2.31
Nkx6-1Q99MA9 Mir6904-201ENSMUST00000183443 67 ntBASIC0.62□□□□□ -2.31
Nkx6-1Q99MA9 Mir3071-201ENSMUST00000093621 80 ntBASIC0.62□□□□□ -2.31
Nkx6-1Q99MA9 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.61□□□□□ -2.31
Nkx6-1Q99MA9 Gm22048-201ENSMUST00000104721 89 ntBASIC0.6□□□□□ -2.31
Nkx6-1Q99MA9 Gm24381-201ENSMUST00000122697 104 ntBASIC0.6□□□□□ -2.31
Nkx6-1Q99MA9 Gm26485-201ENSMUST00000158019 64 ntBASIC0.6□□□□□ -2.31
Nkx6-1Q99MA9 Gm44803-201ENSMUST00000204384 156 ntBASIC0.6□□□□□ -2.31
Nkx6-1Q99MA9 Gm23237-201ENSMUST00000104639 92 ntBASIC0.59□□□□□ -2.31
Nkx6-1Q99MA9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.59□□□□□ -2.31
Nkx6-1Q99MA9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.58□□□□□ -2.32
Nkx6-1Q99MA9 Gm11966-201ENSMUST00000119907 87 ntBASIC0.58□□□□□ -2.32
Nkx6-1Q99MA9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.58□□□□□ -2.32
Nkx6-1Q99MA9 Gm22981-201ENSMUST00000082611 75 ntBASIC0.58□□□□□ -2.32
Nkx6-1Q99MA9 Mir18-201ENSMUST00000083469 96 ntBASIC0.58□□□□□ -2.32
Nkx6-1Q99MA9 Gm25847-201ENSMUST00000116793 96 ntBASIC0.57□□□□□ -2.32
Nkx6-1Q99MA9 Gm25010-201ENSMUST00000158403 65 ntBASIC0.57□□□□□ -2.32
Nkx6-1Q99MA9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Nkx6-1Q99MA9 Gm23785-201ENSMUST00000116741 96 ntBASIC0.56□□□□□ -2.32
Nkx6-1Q99MA9 Snord45b-201ENSMUST00000082797 71 ntBASIC0.56□□□□□ -2.32
Nkx6-1Q99MA9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.56□□□□□ -2.32
Nkx6-1Q99MA9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.55□□□□□ -2.32
Nkx6-1Q99MA9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.55□□□□□ -2.32
Nkx6-1Q99MA9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.55□□□□□ -2.32
Nkx6-1Q99MA9 Gm24070-201ENSMUST00000104519 130 ntBASIC0.54□□□□□ -2.32
Nkx6-1Q99MA9 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.54□□□□□ -2.32
Nkx6-1Q99MA9 Gm25440-201ENSMUST00000158279 154 ntBASIC0.53□□□□□ -2.32
Nkx6-1Q99MA9 Gm22087-201ENSMUST00000158339 88 ntBASIC0.53□□□□□ -2.32
Nkx6-1Q99MA9 Gm23856-201ENSMUST00000158380 99 ntBASIC0.53□□□□□ -2.32
Nkx6-1Q99MA9 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.53□□□□□ -2.32
Nkx6-1Q99MA9 Mir494-201ENSMUST00000093632 85 ntBASIC0.53□□□□□ -2.32
Nkx6-1Q99MA9 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.52□□□□□ -2.33
Nkx6-1Q99MA9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.52□□□□□ -2.33
Nkx6-1Q99MA9 Gm22455-201ENSMUST00000082580 71 ntBASIC0.52□□□□□ -2.33
Nkx6-1Q99MA9 Snord67-201ENSMUST00000104033 111 ntBASIC0.51□□□□□ -2.33
Nkx6-1Q99MA9 Gm45125-201ENSMUST00000206908 151 ntBASIC0.51□□□□□ -2.33
Nkx6-1Q99MA9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.5□□□□□ -2.33
Nkx6-1Q99MA9 Mir3065-201ENSMUST00000198674 87 ntBASIC0.5□□□□□ -2.33
Nkx6-1Q99MA9 Mir15b-201ENSMUST00000083646 64 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 557 ms