Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm23020-201ENSMUST00000158766 253 ntBASIC0.55□□□□□ -2.32
Pcdha1Q91Y21 Gm23306-201ENSMUST00000179058 105 ntBASIC0.55□□□□□ -2.32
Pcdha1Q91Y21 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.55□□□□□ -2.32
Pcdha1Q91Y21 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Pcdha1Q91Y21 Gm22431-201ENSMUST00000158545 107 ntBASIC0.53□□□□□ -2.32
Pcdha1Q91Y21 Gm22981-201ENSMUST00000082611 75 ntBASIC0.53□□□□□ -2.32
Pcdha1Q91Y21 Gm22302-201ENSMUST00000082657 106 ntBASIC0.53□□□□□ -2.32
Pcdha1Q91Y21 Gm11333-201ENSMUST00000119479 148 ntBASIC0.52□□□□□ -2.33
Pcdha1Q91Y21 Mir7065-201ENSMUST00000185110 61 ntBASIC0.52□□□□□ -2.33
Pcdha1Q91Y21 Gm6293-201ENSMUST00000050339 195 ntBASIC0.52□□□□□ -2.33
Pcdha1Q91Y21 Gm22983-201ENSMUST00000158308 104 ntBASIC0.51□□□□□ -2.33
Pcdha1Q91Y21 Gm24495-201ENSMUST00000178575 79 ntBASIC0.51□□□□□ -2.33
Pcdha1Q91Y21 Gm22253-201ENSMUST00000179870 79 ntBASIC0.51□□□□□ -2.33
Pcdha1Q91Y21 Gm25296-201ENSMUST00000082566 67 ntBASIC0.51□□□□□ -2.33
Pcdha1Q91Y21 Mir18-201ENSMUST00000083469 96 ntBASIC0.51□□□□□ -2.33
Pcdha1Q91Y21 Gm27937-201ENSMUST00000183605 88 ntBASIC0.5□□□□□ -2.33
Pcdha1Q91Y21 Mir7673-201ENSMUST00000184567 64 ntBASIC0.5□□□□□ -2.33
Pcdha1Q91Y21 Gm24555-201ENSMUST00000104548 124 ntBASIC0.49□□□□□ -2.33
Pcdha1Q91Y21 Gm26303-201ENSMUST00000116845 119 ntBASIC0.49□□□□□ -2.33
Pcdha1Q91Y21 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Pcdha1Q91Y21 Gm25045-201ENSMUST00000122670 99 ntBASIC0.48□□□□□ -2.33
Pcdha1Q91Y21 Gm25161-201ENSMUST00000158913 132 ntBASIC0.48□□□□□ -2.33
Pcdha1Q91Y21 Gm27415-201ENSMUST00000183720 95 ntBASIC0.48□□□□□ -2.33
Pcdha1Q91Y21 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.48□□□□□ -2.33
Pcdha1Q91Y21 Gm22071-201ENSMUST00000116857 83 ntBASIC0.47□□□□□ -2.33
Pcdha1Q91Y21 Mir3065-201ENSMUST00000198674 87 ntBASIC0.47□□□□□ -2.33
Pcdha1Q91Y21 Gm22459-201ENSMUST00000082577 108 ntBASIC0.47□□□□□ -2.33
Pcdha1Q91Y21 Mir3071-201ENSMUST00000093621 80 ntBASIC0.47□□□□□ -2.33
Pcdha1Q91Y21 Gm43432-201ENSMUST00000196352 121 ntBASIC0.46□□□□□ -2.34
Pcdha1Q91Y21 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.46□□□□□ -2.34
Pcdha1Q91Y21 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.46□□□□□ -2.34
Pcdha1Q91Y21 Gm23376-201ENSMUST00000082938 160 ntBASIC0.46□□□□□ -2.34
Pcdha1Q91Y21 Gm44828-201ENSMUST00000203745 106 ntBASIC0.45□□□□□ -2.34
Pcdha1Q91Y21 Snord67-201ENSMUST00000104033 111 ntBASIC0.44□□□□□ -2.34
Pcdha1Q91Y21 Gm22340-201ENSMUST00000157717 114 ntBASIC0.44□□□□□ -2.34
Pcdha1Q91Y21 Gm27475-201ENSMUST00000183420 61 ntBASIC0.44□□□□□ -2.34
Pcdha1Q91Y21 Gm23293-201ENSMUST00000082552 104 ntBASIC0.44□□□□□ -2.34
Pcdha1Q91Y21 Gm23969-201ENSMUST00000083324 74 ntBASIC0.44□□□□□ -2.34
Pcdha1Q91Y21 Gm24946-201ENSMUST00000158332 106 ntBASIC0.43□□□□□ -2.34
Pcdha1Q91Y21 Gm22759-201ENSMUST00000102276 96 ntBASIC0.42□□□□□ -2.34
Pcdha1Q91Y21 Mir1197-201ENSMUST00000117037 120 ntBASIC0.42□□□□□ -2.34
Pcdha1Q91Y21 Gm23056-201ENSMUST00000082803 111 ntBASIC0.42□□□□□ -2.34
Pcdha1Q91Y21 Mir363-201ENSMUST00000093598 75 ntBASIC0.42□□□□□ -2.34
Pcdha1Q91Y21 Scarna8-201ENSMUST00000158333 131 ntBASIC0.41□□□□□ -2.34
Pcdha1Q91Y21 Gm24772-201ENSMUST00000158507 110 ntBASIC0.41□□□□□ -2.34
Pcdha1Q91Y21 Gm27554-201ENSMUST00000185074 98 ntBASIC0.41□□□□□ -2.34
Pcdha1Q91Y21 Gm25641-201ENSMUST00000175135 108 ntBASIC0.4□□□□□ -2.35
Pcdha1Q91Y21 Gm22455-201ENSMUST00000082580 71 ntBASIC0.4□□□□□ -2.35
Pcdha1Q91Y21 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Pcdha1Q91Y21 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Pcdha1Q91Y21 Gm25247-201ENSMUST00000175475 90 ntBASIC0.39□□□□□ -2.35
Pcdha1Q91Y21 Gm28001-201ENSMUST00000183561 117 ntBASIC0.39□□□□□ -2.35
Pcdha1Q91Y21 Gm27977-201ENSMUST00000185159 111 ntBASIC0.39□□□□□ -2.35
Pcdha1Q91Y21 Gm24445-201ENSMUST00000083981 107 ntBASIC0.39□□□□□ -2.35
Pcdha1Q91Y21 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Pcdha1Q91Y21 Gm25275-201ENSMUST00000104297 129 ntBASIC0.37□□□□□ -2.35
Pcdha1Q91Y21 Gm25375-201ENSMUST00000158157 135 ntBASIC0.37□□□□□ -2.35
Pcdha1Q91Y21 Gm22069-201ENSMUST00000179911 107 ntBASIC0.37□□□□□ -2.35
Pcdha1Q91Y21 Mir34c-201ENSMUST00000083653 77 ntBASIC0.37□□□□□ -2.35
Pcdha1Q91Y21 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Pcdha1Q91Y21 Gm24070-201ENSMUST00000104519 130 ntBASIC0.35□□□□□ -2.35
Pcdha1Q91Y21 Mir3064-201ENSMUST00000175532 67 ntBASIC0.35□□□□□ -2.35
Pcdha1Q91Y21 Mir224-201ENSMUST00000083608 82 ntBASIC0.35□□□□□ -2.35
Pcdha1Q91Y21 Mir7077-201ENSMUST00000183991 57 ntBASIC0.34□□□□□ -2.36
Pcdha1Q91Y21 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Pcdha1Q91Y21 Gm25010-201ENSMUST00000158403 65 ntBASIC0.33□□□□□ -2.36
Pcdha1Q91Y21 Gm23821-201ENSMUST00000158738 106 ntBASIC0.33□□□□□ -2.36
Pcdha1Q91Y21 Gm22943-201ENSMUST00000158564 76 ntBASIC0.32□□□□□ -2.36
Pcdha1Q91Y21 Gm37750-201ENSMUST00000193563 129 ntBASIC0.32□□□□□ -2.36
Pcdha1Q91Y21 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.32□□□□□ -2.36
Pcdha1Q91Y21 Gm24796-201ENSMUST00000104007 107 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Mir876-201ENSMUST00000104659 81 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm24833-201ENSMUST00000116775 120 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm22087-201ENSMUST00000158339 88 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm23477-201ENSMUST00000158882 128 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm23726-201ENSMUST00000178937 67 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm20305-201ENSMUST00000193226 177 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm45617-201ENSMUST00000211132 209 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Gm25791-201ENSMUST00000083292 137 ntBASIC0.31□□□□□ -2.36
Pcdha1Q91Y21 Mir710-201ENSMUST00000102088 110 ntBASIC0.3□□□□□ -2.36
Pcdha1Q91Y21 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Pcdha1Q91Y21 Mir8107-201ENSMUST00000184024 117 ntBASIC0.3□□□□□ -2.36
Pcdha1Q91Y21 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Pcdha1Q91Y21 Mir23a-201ENSMUST00000083677 75 ntBASIC0.3□□□□□ -2.36
Pcdha1Q91Y21 Gm25309-201ENSMUST00000116728 126 ntBASIC0.29□□□□□ -2.36
Pcdha1Q91Y21 Gm25440-201ENSMUST00000158279 154 ntBASIC0.29□□□□□ -2.36
Pcdha1Q91Y21 Gm22088-201ENSMUST00000158341 117 ntBASIC0.29□□□□□ -2.36
Pcdha1Q91Y21 Gm23036-201ENSMUST00000157885 99 ntBASIC0.28□□□□□ -2.36
Pcdha1Q91Y21 Gm22095-201ENSMUST00000158984 150 ntBASIC0.28□□□□□ -2.36
Pcdha1Q91Y21 Gm45125-201ENSMUST00000206908 151 ntBASIC0.28□□□□□ -2.36
Pcdha1Q91Y21 Mir6896-201ENSMUST00000198033 73 ntBASIC0.27□□□□□ -2.37
Pcdha1Q91Y21 Gm23531-201ENSMUST00000104567 68 ntBASIC0.26□□□□□ -2.37
Pcdha1Q91Y21 Gm24378-201ENSMUST00000122699 106 ntBASIC0.26□□□□□ -2.37
Pcdha1Q91Y21 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.25□□□□□ -2.37
Pcdha1Q91Y21 Gm25522-201ENSMUST00000158394 105 ntBASIC0.25□□□□□ -2.37
Pcdha1Q91Y21 Gm22165-201ENSMUST00000158414 103 ntBASIC0.25□□□□□ -2.37
Pcdha1Q91Y21 Gm24918-201ENSMUST00000083022 130 ntBASIC0.25□□□□□ -2.37
Pcdha1Q91Y21 Gm25186-201ENSMUST00000083909 108 ntBASIC0.25□□□□□ -2.37
Pcdha1Q91Y21 Mir6365-201ENSMUST00000183990 101 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 140.5 ms