Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm25496-201ENSMUST00000104430 120 ntBASIC0.37□□□□□ -2.35
Pcdha3Q91Y16 Gm26116-201ENSMUST00000175600 77 ntBASIC0.37□□□□□ -2.35
Pcdha3Q91Y16 AC122335.1-201ENSMUST00000217587 175 ntBASIC0.37□□□□□ -2.35
Pcdha3Q91Y16 Mir219b-201ENSMUST00000198317 65 ntBASIC0.36□□□□□ -2.35
Pcdha3Q91Y16 Gm25296-201ENSMUST00000082566 67 ntBASIC0.36□□□□□ -2.35
Pcdha3Q91Y16 Mir3065-201ENSMUST00000198674 87 ntBASIC0.35□□□□□ -2.35
Pcdha3Q91Y16 Gm27475-201ENSMUST00000183420 61 ntBASIC0.34□□□□□ -2.36
Pcdha3Q91Y16 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.34□□□□□ -2.36
Pcdha3Q91Y16 Gm23570-201ENSMUST00000083029 104 ntBASIC0.34□□□□□ -2.36
Pcdha3Q91Y16 Gm23969-201ENSMUST00000083324 74 ntBASIC0.34□□□□□ -2.36
Pcdha3Q91Y16 Gm23306-201ENSMUST00000179058 105 ntBASIC0.33□□□□□ -2.36
Pcdha3Q91Y16 Mir7673-201ENSMUST00000184567 64 ntBASIC0.33□□□□□ -2.36
Pcdha3Q91Y16 Scarna8-201ENSMUST00000158333 131 ntBASIC0.32□□□□□ -2.36
Pcdha3Q91Y16 Gm22431-201ENSMUST00000158545 107 ntBASIC0.32□□□□□ -2.36
Pcdha3Q91Y16 Gm25161-201ENSMUST00000158913 132 ntBASIC0.32□□□□□ -2.36
Pcdha3Q91Y16 Gm27937-201ENSMUST00000183605 88 ntBASIC0.32□□□□□ -2.36
Pcdha3Q91Y16 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.32□□□□□ -2.36
Pcdha3Q91Y16 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.31□□□□□ -2.36
Pcdha3Q91Y16 Snord67-201ENSMUST00000104033 111 ntBASIC0.31□□□□□ -2.36
Pcdha3Q91Y16 Mir466l-201ENSMUST00000104866 121 ntBASIC0.31□□□□□ -2.36
Pcdha3Q91Y16 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Pcdha3Q91Y16 Gm6293-201ENSMUST00000050339 195 ntBASIC0.31□□□□□ -2.36
Pcdha3Q91Y16 Gm11333-201ENSMUST00000119479 148 ntBASIC0.3□□□□□ -2.36
Pcdha3Q91Y16 Gm28001-201ENSMUST00000183561 117 ntBASIC0.3□□□□□ -2.36
Pcdha3Q91Y16 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC0.3□□□□□ -2.36
Pcdha3Q91Y16 Gm22459-201ENSMUST00000082577 108 ntBASIC0.29□□□□□ -2.36
Pcdha3Q91Y16 Mir363-201ENSMUST00000093598 75 ntBASIC0.29□□□□□ -2.36
Pcdha3Q91Y16 Mir3071-201ENSMUST00000093621 80 ntBASIC0.29□□□□□ -2.36
Pcdha3Q91Y16 Gm24495-201ENSMUST00000178575 79 ntBASIC0.28□□□□□ -2.36
Pcdha3Q91Y16 Gm22253-201ENSMUST00000179870 79 ntBASIC0.28□□□□□ -2.36
Pcdha3Q91Y16 Gm22455-201ENSMUST00000082580 71 ntBASIC0.27□□□□□ -2.37
Pcdha3Q91Y16 Mir7079-201ENSMUST00000184697 69 ntBASIC0.26□□□□□ -2.37
Pcdha3Q91Y16 Mir710-201ENSMUST00000102088 110 ntBASIC0.25□□□□□ -2.37
Pcdha3Q91Y16 Gm23821-201ENSMUST00000158738 106 ntBASIC0.25□□□□□ -2.37
Pcdha3Q91Y16 Gm44490-201ENSMUST00000198566 127 ntBASIC0.25□□□□□ -2.37
Pcdha3Q91Y16 Mir224-201ENSMUST00000083608 82 ntBASIC0.25□□□□□ -2.37
Pcdha3Q91Y16 Gm25275-201ENSMUST00000104297 129 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Gm24833-201ENSMUST00000116775 120 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Mir1197-201ENSMUST00000117037 120 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Gm23783-201ENSMUST00000157941 102 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Gm25641-201ENSMUST00000175135 108 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Gm27554-201ENSMUST00000185074 98 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Gm23376-201ENSMUST00000082938 160 ntBASIC0.24□□□□□ -2.37
Pcdha3Q91Y16 Gm27415-201ENSMUST00000183720 95 ntBASIC0.23□□□□□ -2.37
Pcdha3Q91Y16 Gm27977-201ENSMUST00000185159 111 ntBASIC0.23□□□□□ -2.37
Pcdha3Q91Y16 Gm45617-201ENSMUST00000211132 209 ntBASIC0.23□□□□□ -2.37
Pcdha3Q91Y16 Gm25787-201ENSMUST00000104709 92 ntBASIC0.22□□□□□ -2.37
Pcdha3Q91Y16 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Pcdha3Q91Y16 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Pcdha3Q91Y16 Mir8107-201ENSMUST00000184024 117 ntBASIC0.22□□□□□ -2.37
Pcdha3Q91Y16 Gm37750-201ENSMUST00000193563 129 ntBASIC0.22□□□□□ -2.37
Pcdha3Q91Y16 Gm25791-201ENSMUST00000083292 137 ntBASIC0.22□□□□□ -2.37
Pcdha3Q91Y16 Gm24070-201ENSMUST00000104519 130 ntBASIC0.21□□□□□ -2.38
Pcdha3Q91Y16 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.21□□□□□ -2.38
Pcdha3Q91Y16 Gm25010-201ENSMUST00000158403 65 ntBASIC0.21□□□□□ -2.38
Pcdha3Q91Y16 Mir7077-201ENSMUST00000183991 57 ntBASIC0.21□□□□□ -2.38
Pcdha3Q91Y16 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Pcdha3Q91Y16 Gm24555-201ENSMUST00000104548 124 ntBASIC0.2□□□□□ -2.38
Pcdha3Q91Y16 Gm23293-201ENSMUST00000082552 104 ntBASIC0.2□□□□□ -2.38
Pcdha3Q91Y16 Gm24796-201ENSMUST00000104007 107 ntBASIC0.19□□□□□ -2.38
Pcdha3Q91Y16 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Pcdha3Q91Y16 Gm22071-201ENSMUST00000116857 83 ntBASIC0.18□□□□□ -2.38
Pcdha3Q91Y16 Gm24772-201ENSMUST00000158507 110 ntBASIC0.18□□□□□ -2.38
Pcdha3Q91Y16 Gm44328-201ENSMUST00000199331 75 ntBASIC0.18□□□□□ -2.38
Pcdha3Q91Y16 Gm23056-201ENSMUST00000082803 111 ntBASIC0.18□□□□□ -2.38
Pcdha3Q91Y16 Mir23a-201ENSMUST00000083677 75 ntBASIC0.18□□□□□ -2.38
Pcdha3Q91Y16 Gm23347-201ENSMUST00000083823 82 ntBASIC0.18□□□□□ -2.38
Pcdha3Q91Y16 Mir876-201ENSMUST00000104659 81 ntBASIC0.17□□□□□ -2.38
Pcdha3Q91Y16 Gm25045-201ENSMUST00000122670 99 ntBASIC0.17□□□□□ -2.38
Pcdha3Q91Y16 Mir3064-201ENSMUST00000175532 67 ntBASIC0.17□□□□□ -2.38
Pcdha3Q91Y16 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.17□□□□□ -2.38
Pcdha3Q91Y16 Gm25186-201ENSMUST00000083909 108 ntBASIC0.17□□□□□ -2.38
Pcdha3Q91Y16 Gm25309-201ENSMUST00000116728 126 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm23036-201ENSMUST00000157885 99 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm24946-201ENSMUST00000158332 106 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm22087-201ENSMUST00000158339 88 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm25522-201ENSMUST00000158394 105 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm22838-201ENSMUST00000158437 99 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm25952-201ENSMUST00000175329 74 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Gm45125-201ENSMUST00000206908 151 ntBASIC0.16□□□□□ -2.38
Pcdha3Q91Y16 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Pcdha3Q91Y16 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
Pcdha3Q91Y16 Gm25440-201ENSMUST00000158279 154 ntBASIC0.15□□□□□ -2.39
Pcdha3Q91Y16 Mir3967-201ENSMUST00000198710 68 ntBASIC0.14□□□□□ -2.39
Pcdha3Q91Y16 Snora62-201ENSMUST00000082991 149 ntBASIC0.14□□□□□ -2.39
Pcdha3Q91Y16 Gm24918-201ENSMUST00000083022 130 ntBASIC0.14□□□□□ -2.39
Pcdha3Q91Y16 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.14□□□□□ -2.39
Pcdha3Q91Y16 Gm23494-201ENSMUST00000116830 126 ntBASIC0.13□□□□□ -2.39
Pcdha3Q91Y16 Gm22165-201ENSMUST00000158414 103 ntBASIC0.13□□□□□ -2.39
Pcdha3Q91Y16 Gm23477-201ENSMUST00000158882 128 ntBASIC0.13□□□□□ -2.39
Pcdha3Q91Y16 Gm23159-201ENSMUST00000175088 77 ntBASIC0.13□□□□□ -2.39
Pcdha3Q91Y16 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Pcdha3Q91Y16 Mir34c-201ENSMUST00000083653 77 ntBASIC0.13□□□□□ -2.39
Pcdha3Q91Y16 Gm23726-201ENSMUST00000178937 67 ntBASIC0.12□□□□□ -2.39
Pcdha3Q91Y16 Mir6896-201ENSMUST00000198033 73 ntBASIC0.12□□□□□ -2.39
Pcdha3Q91Y16 Mir717-201ENSMUST00000102259 109 ntBASIC0.11□□□□□ -2.39
Pcdha3Q91Y16 Gm20305-201ENSMUST00000193226 177 ntBASIC0.11□□□□□ -2.39
Pcdha3Q91Y16 Gm24201-201ENSMUST00000082946 125 ntBASIC0.1□□□□□ -2.39
Pcdha3Q91Y16 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.4
Pcdha3Q91Y16 Gm22095-201ENSMUST00000158984 150 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 234.8 ms