Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.08□□□□□ -2.42
Atg4aQ8C9S8 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.08□□□□□ -2.42
Atg4aQ8C9S8 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.08□□□□□ -2.42
Atg4aQ8C9S8 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.08□□□□□ -2.42
Atg4aQ8C9S8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
Atg4aQ8C9S8 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.09□□□□□ -2.42
Atg4aQ8C9S8 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.1□□□□□ -2.43
Atg4aQ8C9S8 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.11□□□□□ -2.43
Atg4aQ8C9S8 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.11□□□□□ -2.43
Atg4aQ8C9S8 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.11□□□□□ -2.43
Atg4aQ8C9S8 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.12□□□□□ -2.43
Atg4aQ8C9S8 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.12□□□□□ -2.43
Atg4aQ8C9S8 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.12□□□□□ -2.43
Atg4aQ8C9S8 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.12□□□□□ -2.43
Atg4aQ8C9S8 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.12□□□□□ -2.43
Atg4aQ8C9S8 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.13□□□□□ -2.43
Atg4aQ8C9S8 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.13□□□□□ -2.43
Atg4aQ8C9S8 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.13□□□□□ -2.43
Atg4aQ8C9S8 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.13□□□□□ -2.43
Atg4aQ8C9S8 Gm25322-201ENSMUST00000122556 104 ntBASIC-0.14□□□□□ -2.43
Atg4aQ8C9S8 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.14□□□□□ -2.43
Atg4aQ8C9S8 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.14□□□□□ -2.43
Atg4aQ8C9S8 Mir191-201ENSMUST00000196210 74 ntBASIC-0.14□□□□□ -2.43
Atg4aQ8C9S8 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.14□□□□□ -2.43
Atg4aQ8C9S8 Mir141-201ENSMUST00000083540 72 ntBASIC-0.14□□□□□ -2.43
Atg4aQ8C9S8 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.15□□□□□ -2.43
Atg4aQ8C9S8 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.15□□□□□ -2.43
Atg4aQ8C9S8 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.15□□□□□ -2.43
Atg4aQ8C9S8 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.15□□□□□ -2.43
Atg4aQ8C9S8 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.16□□□□□ -2.44
Atg4aQ8C9S8 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.16□□□□□ -2.44
Atg4aQ8C9S8 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.16□□□□□ -2.44
Atg4aQ8C9S8 Gm24162-201ENSMUST00000093665 102 ntBASIC-0.16□□□□□ -2.44
Atg4aQ8C9S8 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.17□□□□□ -2.44
Atg4aQ8C9S8 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.18□□□□□ -2.44
Atg4aQ8C9S8 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.18□□□□□ -2.44
Atg4aQ8C9S8 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.18□□□□□ -2.44
Atg4aQ8C9S8 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.19□□□□□ -2.44
Atg4aQ8C9S8 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.19□□□□□ -2.44
Atg4aQ8C9S8 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Snora26-201ENSMUST00000175614 121 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Mir214-201ENSMUST00000083582 110 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.2□□□□□ -2.44
Atg4aQ8C9S8 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.21□□□□□ -2.44
Atg4aQ8C9S8 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.21□□□□□ -2.44
Atg4aQ8C9S8 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.21□□□□□ -2.44
Atg4aQ8C9S8 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.22□□□□□ -2.44
Atg4aQ8C9S8 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.23□□□□□ -2.45
Atg4aQ8C9S8 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.23□□□□□ -2.45
Atg4aQ8C9S8 Gm25964-201ENSMUST00000157171 97 ntBASIC-0.24□□□□□ -2.45
Atg4aQ8C9S8 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.24□□□□□ -2.45
Atg4aQ8C9S8 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.24□□□□□ -2.45
Atg4aQ8C9S8 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.24□□□□□ -2.45
Atg4aQ8C9S8 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.24□□□□□ -2.45
Atg4aQ8C9S8 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Atg4aQ8C9S8 Mir741-201ENSMUST00000103931 71 ntBASIC-0.25□□□□□ -2.45
Atg4aQ8C9S8 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.25□□□□□ -2.45
Atg4aQ8C9S8 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.25□□□□□ -2.45
Atg4aQ8C9S8 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.25□□□□□ -2.45
Atg4aQ8C9S8 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.27□□□□□ -2.45
Atg4aQ8C9S8 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.27□□□□□ -2.45
Atg4aQ8C9S8 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.27□□□□□ -2.45
Atg4aQ8C9S8 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.27□□□□□ -2.45
Atg4aQ8C9S8 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.27□□□□□ -2.45
Atg4aQ8C9S8 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Snora62-201ENSMUST00000082991 149 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.28□□□□□ -2.45
Atg4aQ8C9S8 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.29□□□□□ -2.46
Atg4aQ8C9S8 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.29□□□□□ -2.46
Atg4aQ8C9S8 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.3□□□□□ -2.46
Atg4aQ8C9S8 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.31□□□□□ -2.46
Atg4aQ8C9S8 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.31□□□□□ -2.46
Atg4aQ8C9S8 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.31□□□□□ -2.46
Atg4aQ8C9S8 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.31□□□□□ -2.46
Atg4aQ8C9S8 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.32□□□□□ -2.46
Atg4aQ8C9S8 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 155.1 ms