Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43038-201ENSMUST00000202359 88 ntBASIC-1.97□□□□□ -2.72
Trub1Q8C0D0 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.97□□□□□ -2.72
Trub1Q8C0D0 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.97□□□□□ -2.72
Trub1Q8C0D0 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.98□□□□□ -2.73
Trub1Q8C0D0 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.98□□□□□ -2.73
Trub1Q8C0D0 Mir7-1-201ENSMUST00000083500 108 ntBASIC-1.98□□□□□ -2.73
Trub1Q8C0D0 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.99□□□□□ -2.73
Trub1Q8C0D0 Gm25684-201ENSMUST00000083941 107 ntBASIC-1.99□□□□□ -2.73
Trub1Q8C0D0 Gm25619-201ENSMUST00000122621 104 ntBASIC-2□□□□□ -2.73
Trub1Q8C0D0 Gm26104-201ENSMUST00000157250 108 ntBASIC-2□□□□□ -2.73
Trub1Q8C0D0 Gm24263-201ENSMUST00000104059 107 ntBASIC-2.01□□□□□ -2.73
Trub1Q8C0D0 Gm38298-201ENSMUST00000193578 118 ntBASIC-2.01□□□□□ -2.73
Trub1Q8C0D0 Gm20108-201ENSMUST00000219977 153 ntBASIC-2.01□□□□□ -2.73
Trub1Q8C0D0 Gm22672-201ENSMUST00000104414 134 ntBASIC-2.02□□□□□ -2.73
Trub1Q8C0D0 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.02□□□□□ -2.73
Trub1Q8C0D0 Gm27686-201ENSMUST00000185123 91 ntBASIC-2.02□□□□□ -2.73
Trub1Q8C0D0 Mir741-201ENSMUST00000103931 71 ntBASIC-2.04□□□□□ -2.74
Trub1Q8C0D0 Gm24183-201ENSMUST00000122572 93 ntBASIC-2.04□□□□□ -2.74
Trub1Q8C0D0 Gm23173-201ENSMUST00000157161 160 ntBASIC-2.04□□□□□ -2.74
Trub1Q8C0D0 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.04□□□□□ -2.74
Trub1Q8C0D0 Gm37746-201ENSMUST00000193249 198 ntBASIC-2.04□□□□□ -2.74
Trub1Q8C0D0 AC166341.8-201ENSMUST00000221267 108 ntBASIC-2.04□□□□□ -2.74
Trub1Q8C0D0 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-2.05□□□□□ -2.74
Trub1Q8C0D0 Gm14837-201ENSMUST00000119688 206 ntBASIC-2.05□□□□□ -2.74
Trub1Q8C0D0 Gm25440-201ENSMUST00000158279 154 ntBASIC-2.05□□□□□ -2.74
Trub1Q8C0D0 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.05□□□□□ -2.74
Trub1Q8C0D0 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm22258-201ENSMUST00000177645 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm26032-201ENSMUST00000178535 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm25210-201ENSMUST00000178813 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm25157-201ENSMUST00000178914 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm22046-201ENSMUST00000179027 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm22941-201ENSMUST00000179630 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Gm25471-201ENSMUST00000180126 94 ntBASIC-2.06□□□□□ -2.74
Trub1Q8C0D0 Mir5117-201ENSMUST00000083226 84 ntBASIC-2.07□□□□□ -2.74
Trub1Q8C0D0 Gm24750-201ENSMUST00000157843 104 ntBASIC-2.08□□□□□ -2.74
Trub1Q8C0D0 mt-Tt-201ENSMUST00000082422 67 ntBASIC-2.08□□□□□ -2.74
Trub1Q8C0D0 Gm22973-201ENSMUST00000083298 191 ntBASIC-2.08□□□□□ -2.74
Trub1Q8C0D0 Gm25229-201ENSMUST00000178587 79 ntBASIC-2.09□□□□□ -2.74
Trub1Q8C0D0 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.1□□□□□ -2.75
Trub1Q8C0D0 Gm25641-201ENSMUST00000175135 108 ntBASIC-2.1□□□□□ -2.75
Trub1Q8C0D0 Gm23240-201ENSMUST00000083009 121 ntBASIC-2.1□□□□□ -2.75
Trub1Q8C0D0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-2.11□□□□□ -2.75
Trub1Q8C0D0 Gm42844-201ENSMUST00000200355 112 ntBASIC-2.11□□□□□ -2.75
Trub1Q8C0D0 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2.11□□□□□ -2.75
Trub1Q8C0D0 Gm23970-201ENSMUST00000083319 107 ntBASIC-2.11□□□□□ -2.75
Trub1Q8C0D0 Gm23864-201ENSMUST00000177607 107 ntBASIC-2.12□□□□□ -2.75
Trub1Q8C0D0 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.13□□□□□ -2.75
Trub1Q8C0D0 Gm23909-201ENSMUST00000104598 131 ntBASIC-2.13□□□□□ -2.75
Trub1Q8C0D0 Gm22205-201ENSMUST00000122655 71 ntBASIC-2.13□□□□□ -2.75
Trub1Q8C0D0 Gm44470-201ENSMUST00000203913 142 ntBASIC-2.13□□□□□ -2.75
Trub1Q8C0D0 Gm25565-201ENSMUST00000104605 105 ntBASIC-2.14□□□□□ -2.75
Trub1Q8C0D0 Gm23651-201ENSMUST00000116755 120 ntBASIC-2.14□□□□□ -2.75
Trub1Q8C0D0 Mir5619-201ENSMUST00000176065 61 ntBASIC-2.15□□□□□ -2.75
Trub1Q8C0D0 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.15□□□□□ -2.75
Trub1Q8C0D0 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.15□□□□□ -2.75
Trub1Q8C0D0 Gm25696-201ENSMUST00000082900 105 ntBASIC-2.17□□□□□ -2.76
Trub1Q8C0D0 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.18□□□□□ -2.76
Trub1Q8C0D0 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm25609-201ENSMUST00000104019 104 ntBASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm25964-201ENSMUST00000157171 97 ntBASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm25158-201ENSMUST00000177681 121 ntBASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm26229-201ENSMUST00000179699 121 ntBASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm27554-201ENSMUST00000185074 98 ntBASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.19□□□□□ -2.76
Trub1Q8C0D0 Gm24400-201ENSMUST00000157865 107 ntBASIC-2.2□□□□□ -2.76
Trub1Q8C0D0 Gm26337-201ENSMUST00000178000 79 ntBASIC-2.2□□□□□ -2.76
Trub1Q8C0D0 Mir494-201ENSMUST00000093632 85 ntBASIC-2.2□□□□□ -2.76
Trub1Q8C0D0 Gm24775-201ENSMUST00000157377 99 ntBASIC-2.21□□□□□ -2.76
Trub1Q8C0D0 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.21□□□□□ -2.76
Trub1Q8C0D0 Gm22413-201ENSMUST00000175465 85 ntBASIC-2.22□□□□□ -2.76
Trub1Q8C0D0 Gm23434-201ENSMUST00000157179 100 ntBASIC-2.23□□□□□ -2.77
Trub1Q8C0D0 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.23□□□□□ -2.77
Trub1Q8C0D0 Gm22828-201ENSMUST00000083768 107 ntBASIC-2.23□□□□□ -2.77
Trub1Q8C0D0 Gm10351-201ENSMUST00000087694 125 ntBASIC-2.24□□□□□ -2.77
Trub1Q8C0D0 Gm23922-201ENSMUST00000178792 79 ntBASIC-2.25□□□□□ -2.77
Trub1Q8C0D0 Gm24657-201ENSMUST00000180085 79 ntBASIC-2.25□□□□□ -2.77
Trub1Q8C0D0 Gm22996-201ENSMUST00000180236 79 ntBASIC-2.25□□□□□ -2.77
Trub1Q8C0D0 Gm26225-201ENSMUST00000082508 135 ntBASIC-2.25□□□□□ -2.77
Trub1Q8C0D0 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.25□□□□□ -2.77
Trub1Q8C0D0 Gm25322-201ENSMUST00000122556 104 ntBASIC-2.26□□□□□ -2.77
Trub1Q8C0D0 Gm25678-201ENSMUST00000174984 73 ntBASIC-2.26□□□□□ -2.77
Trub1Q8C0D0 Gm22621-201ENSMUST00000179678 74 ntBASIC-2.26□□□□□ -2.77
Trub1Q8C0D0 Gm25316-201ENSMUST00000116826 118 ntBASIC-2.27□□□□□ -2.77
Trub1Q8C0D0 Gm22677-201ENSMUST00000116977 108 ntBASIC-2.27□□□□□ -2.77
Trub1Q8C0D0 Gm28724-201ENSMUST00000186149 625 ntBASIC-2.27□□□□□ -2.77
Trub1Q8C0D0 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.27□□□□□ -2.77
Trub1Q8C0D0 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.28□□□□□ -2.77
Trub1Q8C0D0 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.28□□□□□ -2.77
Trub1Q8C0D0 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.28□□□□□ -2.77
Trub1Q8C0D0 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.28□□□□□ -2.77
Trub1Q8C0D0 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-2.31□□□□□ -2.78
Trub1Q8C0D0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-2.31□□□□□ -2.78
Trub1Q8C0D0 Gm22770-201ENSMUST00000158368 67 ntBASIC-2.31□□□□□ -2.78
Trub1Q8C0D0 Mir122-201ENSMUST00000083468 66 ntBASIC-2.31□□□□□ -2.78
Trub1Q8C0D0 Gm25915-201ENSMUST00000104265 126 ntBASIC-2.32□□□□□ -2.78
Trub1Q8C0D0 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.32□□□□□ -2.78
Trub1Q8C0D0 Gm25449-201ENSMUST00000179389 79 ntBASIC-2.32□□□□□ -2.78
Trub1Q8C0D0 Gm27928-201ENSMUST00000183747 256 ntBASIC-2.32□□□□□ -2.78
Trub1Q8C0D0 Gm24916-201ENSMUST00000157287 79 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms