Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm11333-201ENSMUST00000119479 148 ntBASIC0.67□□□□□ -2.3
Ubp1Q811S7 Gm22943-201ENSMUST00000158564 76 ntBASIC0.67□□□□□ -2.3
Ubp1Q811S7 Gm27937-201ENSMUST00000183605 88 ntBASIC0.67□□□□□ -2.3
Ubp1Q811S7 Mir3065-201ENSMUST00000198674 87 ntBASIC0.67□□□□□ -2.3
Ubp1Q811S7 Gm25641-201ENSMUST00000175135 108 ntBASIC0.66□□□□□ -2.3
Ubp1Q811S7 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Ubp1Q811S7 Gm23321-201ENSMUST00000104465 126 ntBASIC0.65□□□□□ -2.31
Ubp1Q811S7 Gm27554-201ENSMUST00000185074 98 ntBASIC0.65□□□□□ -2.31
Ubp1Q811S7 Gm23293-201ENSMUST00000082552 104 ntBASIC0.65□□□□□ -2.31
Ubp1Q811S7 Gm23376-201ENSMUST00000082938 160 ntBASIC0.65□□□□□ -2.31
Ubp1Q811S7 Gm25296-201ENSMUST00000082566 67 ntBASIC0.64□□□□□ -2.31
Ubp1Q811S7 Gm23347-201ENSMUST00000083823 82 ntBASIC0.64□□□□□ -2.31
Ubp1Q811S7 Mir219b-201ENSMUST00000198317 65 ntBASIC0.63□□□□□ -2.31
Ubp1Q811S7 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.63□□□□□ -2.31
Ubp1Q811S7 Mir18-201ENSMUST00000083469 96 ntBASIC0.63□□□□□ -2.31
Ubp1Q811S7 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Ubp1Q811S7 Mir7673-201ENSMUST00000184567 64 ntBASIC0.61□□□□□ -2.31
Ubp1Q811S7 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Ubp1Q811S7 Gm22720-201ENSMUST00000122710 87 ntBASIC0.6□□□□□ -2.31
Ubp1Q811S7 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Ubp1Q811S7 Gm22983-201ENSMUST00000158308 104 ntBASIC0.6□□□□□ -2.31
Ubp1Q811S7 Gm25010-201ENSMUST00000158403 65 ntBASIC0.6□□□□□ -2.31
Ubp1Q811S7 Gm22981-201ENSMUST00000082611 75 ntBASIC0.6□□□□□ -2.31
Ubp1Q811S7 Gm23008-201ENSMUST00000158946 80 ntBASIC0.59□□□□□ -2.31
Ubp1Q811S7 Gm26236-201ENSMUST00000175536 137 ntBASIC0.59□□□□□ -2.31
Ubp1Q811S7 Gm24258-201ENSMUST00000083739 133 ntBASIC0.59□□□□□ -2.31
Ubp1Q811S7 Gm24323-201ENSMUST00000175342 77 ntBASIC0.58□□□□□ -2.32
Ubp1Q811S7 Gm27977-201ENSMUST00000185159 111 ntBASIC0.58□□□□□ -2.32
Ubp1Q811S7 Gm22459-201ENSMUST00000082577 108 ntBASIC0.57□□□□□ -2.32
Ubp1Q811S7 Snord67-201ENSMUST00000104033 111 ntBASIC0.56□□□□□ -2.32
Ubp1Q811S7 Gm23036-201ENSMUST00000157885 99 ntBASIC0.56□□□□□ -2.32
Ubp1Q811S7 Gm22431-201ENSMUST00000158545 107 ntBASIC0.56□□□□□ -2.32
Ubp1Q811S7 Gm23477-201ENSMUST00000158882 128 ntBASIC0.56□□□□□ -2.32
Ubp1Q811S7 Gm23605-201ENSMUST00000157255 127 ntBASIC0.55□□□□□ -2.32
Ubp1Q811S7 Gm24070-201ENSMUST00000104519 130 ntBASIC0.54□□□□□ -2.32
Ubp1Q811S7 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.54□□□□□ -2.32
Ubp1Q811S7 Mir3064-201ENSMUST00000175532 67 ntBASIC0.53□□□□□ -2.32
Ubp1Q811S7 Gm23726-201ENSMUST00000178937 67 ntBASIC0.53□□□□□ -2.32
Ubp1Q811S7 Mir3071-201ENSMUST00000093621 80 ntBASIC0.53□□□□□ -2.32
Ubp1Q811S7 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Ubp1Q811S7 Gm24378-201ENSMUST00000122699 106 ntBASIC0.52□□□□□ -2.33
Ubp1Q811S7 Gm23783-201ENSMUST00000157941 102 ntBASIC0.52□□□□□ -2.33
Ubp1Q811S7 Scarna8-201ENSMUST00000158333 131 ntBASIC0.52□□□□□ -2.33
Ubp1Q811S7 Mir7079-201ENSMUST00000184697 69 ntBASIC0.52□□□□□ -2.33
Ubp1Q811S7 Gm22540-201ENSMUST00000158168 117 ntBASIC0.51□□□□□ -2.33
Ubp1Q811S7 Gm25161-201ENSMUST00000158913 132 ntBASIC0.51□□□□□ -2.33
Ubp1Q811S7 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Ubp1Q811S7 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.51□□□□□ -2.33
Ubp1Q811S7 Gm23126-201ENSMUST00000104260 134 ntBASIC0.5□□□□□ -2.33
Ubp1Q811S7 Gm25787-201ENSMUST00000104709 92 ntBASIC0.5□□□□□ -2.33
Ubp1Q811S7 Gm22095-201ENSMUST00000158984 150 ntBASIC0.5□□□□□ -2.33
Ubp1Q811S7 Gm26285-201ENSMUST00000177923 107 ntBASIC0.5□□□□□ -2.33
Ubp1Q811S7 Gm23622-201ENSMUST00000082460 107 ntBASIC0.5□□□□□ -2.33
Ubp1Q811S7 Gm25275-201ENSMUST00000104297 129 ntBASIC0.49□□□□□ -2.33
Ubp1Q811S7 Gm20305-201ENSMUST00000193226 177 ntBASIC0.49□□□□□ -2.33
Ubp1Q811S7 Gm22302-201ENSMUST00000082657 106 ntBASIC0.49□□□□□ -2.33
Ubp1Q811S7 Gm26303-201ENSMUST00000116845 119 ntBASIC0.48□□□□□ -2.33
Ubp1Q811S7 Gm25440-201ENSMUST00000158279 154 ntBASIC0.48□□□□□ -2.33
Ubp1Q811S7 Gm27475-201ENSMUST00000183420 61 ntBASIC0.48□□□□□ -2.33
Ubp1Q811S7 Gm23969-201ENSMUST00000083324 74 ntBASIC0.48□□□□□ -2.33
Ubp1Q811S7 Gm23761-201ENSMUST00000158347 104 ntBASIC0.47□□□□□ -2.33
Ubp1Q811S7 Gm43432-201ENSMUST00000196352 121 ntBASIC0.47□□□□□ -2.33
Ubp1Q811S7 Gm22455-201ENSMUST00000082580 71 ntBASIC0.47□□□□□ -2.33
Ubp1Q811S7 Gm24772-201ENSMUST00000158507 110 ntBASIC0.45□□□□□ -2.34
Ubp1Q811S7 Gm28001-201ENSMUST00000183561 117 ntBASIC0.45□□□□□ -2.34
Ubp1Q811S7 Gm25522-201ENSMUST00000158394 105 ntBASIC0.44□□□□□ -2.34
Ubp1Q811S7 Snord45b-201ENSMUST00000082797 71 ntBASIC0.44□□□□□ -2.34
Ubp1Q811S7 Gm24918-201ENSMUST00000083022 130 ntBASIC0.44□□□□□ -2.34
Ubp1Q811S7 Gm45125-201ENSMUST00000206908 151 ntBASIC0.43□□□□□ -2.34
Ubp1Q811S7 Mir224-201ENSMUST00000083608 82 ntBASIC0.43□□□□□ -2.34
Ubp1Q811S7 Mir23a-201ENSMUST00000083677 75 ntBASIC0.43□□□□□ -2.34
Ubp1Q811S7 Gm22067-201ENSMUST00000122790 107 ntBASIC0.42□□□□□ -2.34
Ubp1Q811S7 Gm23672-201ENSMUST00000157471 107 ntBASIC0.42□□□□□ -2.34
Ubp1Q811S7 Gm24796-201ENSMUST00000104007 107 ntBASIC0.41□□□□□ -2.34
Ubp1Q811S7 Gm26485-201ENSMUST00000158019 64 ntBASIC0.41□□□□□ -2.34
Ubp1Q811S7 Gm37750-201ENSMUST00000193563 129 ntBASIC0.41□□□□□ -2.34
Ubp1Q811S7 Gm44328-201ENSMUST00000199331 75 ntBASIC0.41□□□□□ -2.34
Ubp1Q811S7 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Gm24555-201ENSMUST00000104548 124 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Gm25309-201ENSMUST00000116728 126 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Gm25247-201ENSMUST00000175475 90 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Mir8107-201ENSMUST00000184024 117 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.4□□□□□ -2.35
Ubp1Q811S7 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Mir15b-201ENSMUST00000083646 64 ntBASIC0.4□□□□□ -2.35
Ubp1Q811S7 Gm22087-201ENSMUST00000158339 88 ntBASIC0.39□□□□□ -2.35
Ubp1Q811S7 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Ubp1Q811S7 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.39□□□□□ -2.35
Ubp1Q811S7 Gm11966-201ENSMUST00000119907 87 ntBASIC0.38□□□□□ -2.35
Ubp1Q811S7 Gm45617-201ENSMUST00000211132 209 ntBASIC0.38□□□□□ -2.35
Ubp1Q811S7 Mir363-201ENSMUST00000093598 75 ntBASIC0.38□□□□□ -2.35
Ubp1Q811S7 Gm23590-201ENSMUST00000157661 104 ntBASIC0.37□□□□□ -2.35
Ubp1Q811S7 Snora62-201ENSMUST00000082991 149 ntBASIC0.37□□□□□ -2.35
Ubp1Q811S7 Gm24833-201ENSMUST00000116775 120 ntBASIC0.36□□□□□ -2.35
Ubp1Q811S7 Gm23494-201ENSMUST00000116830 126 ntBASIC0.36□□□□□ -2.35
Ubp1Q811S7 Gm22340-201ENSMUST00000157717 114 ntBASIC0.36□□□□□ -2.35
Ubp1Q811S7 Mir6896-201ENSMUST00000198033 73 ntBASIC0.35□□□□□ -2.35
Ubp1Q811S7 Gm44828-201ENSMUST00000203745 106 ntBASIC0.35□□□□□ -2.35
Ubp1Q811S7 Gm22759-201ENSMUST00000102276 96 ntBASIC0.34□□□□□ -2.36
Ubp1Q811S7 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 261.4 ms