Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trim28Q62318 Mir876-201ENSMUST00000104659 81 ntBASIC1.03□□□□□ -2.24
Trim28Q62318 Mir3109-201ENSMUST00000175301 88 ntBASIC1.03□□□□□ -2.24
Trim28Q62318 Gm23416-201ENSMUST00000175520 95 ntBASIC1.03□□□□□ -2.24
Trim28Q62318 Gm27717-201ENSMUST00000183933 151 ntBASIC1.03□□□□□ -2.24
Trim28Q62318 Gm22652-201ENSMUST00000083207 131 ntBASIC1.03□□□□□ -2.24
Trim28Q62318 Gm25138-201ENSMUST00000083248 136 ntBASIC1.03□□□□□ -2.24
Trim28Q62318 Gm24431-201ENSMUST00000104073 66 ntBASIC1.02□□□□□ -2.25
Trim28Q62318 Gm25787-201ENSMUST00000104709 92 ntBASIC1.02□□□□□ -2.25
Trim28Q62318 Gm23853-201ENSMUST00000158375 104 ntBASIC1.02□□□□□ -2.25
Trim28Q62318 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.02□□□□□ -2.25
Trim28Q62318 Gm42533-201ENSMUST00000196247 157 ntBASIC1.02□□□□□ -2.25
Trim28Q62318 Gm25186-201ENSMUST00000083909 108 ntBASIC1.02□□□□□ -2.25
Trim28Q62318 Gm14533-201ENSMUST00000117088 93 ntBASIC1.01□□□□□ -2.25
Trim28Q62318 Gm22165-201ENSMUST00000158414 103 ntBASIC1.01□□□□□ -2.25
Trim28Q62318 Gm23008-201ENSMUST00000158946 80 ntBASIC1.01□□□□□ -2.25
Trim28Q62318 Gm23735-201ENSMUST00000082551 134 ntBASIC1.01□□□□□ -2.25
Trim28Q62318 Gm25087-201ENSMUST00000101992 78 ntBASIC1□□□□□ -2.25
Trim28Q62318 Gm26338-201ENSMUST00000102372 110 ntBASIC1□□□□□ -2.25
Trim28Q62318 Gm22469-201ENSMUST00000104118 133 ntBASIC1□□□□□ -2.25
Trim28Q62318 Gm38274-201ENSMUST00000195689 148 ntBASIC1□□□□□ -2.25
Trim28Q62318 Gm26467-201ENSMUST00000097257 78 ntBASIC1□□□□□ -2.25
Trim28Q62318 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.99□□□□□ -2.25
Trim28Q62318 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.99□□□□□ -2.25
Trim28Q62318 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Trim28Q62318 Gm26375-201ENSMUST00000101829 106 ntBASIC0.98□□□□□ -2.25
Trim28Q62318 Gm25309-201ENSMUST00000116728 126 ntBASIC0.98□□□□□ -2.25
Trim28Q62318 Gm25465-201ENSMUST00000157716 105 ntBASIC0.97□□□□□ -2.25
Trim28Q62318 Mir7231-201ENSMUST00000196252 61 ntBASIC0.97□□□□□ -2.25
Trim28Q62318 Gm42677-201ENSMUST00000196363 127 ntBASIC0.97□□□□□ -2.25
Trim28Q62318 Gm22595-201ENSMUST00000104250 130 ntBASIC0.96□□□□□ -2.26
Trim28Q62318 Gm25656-201ENSMUST00000158466 66 ntBASIC0.96□□□□□ -2.26
Trim28Q62318 Gm26007-201ENSMUST00000158798 120 ntBASIC0.96□□□□□ -2.26
Trim28Q62318 Gm22689-201ENSMUST00000102452 110 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Gm22717-201ENSMUST00000122703 171 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Gm25161-201ENSMUST00000158913 132 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Gm24321-201ENSMUST00000175348 80 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Gm44301-201ENSMUST00000200362 143 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 DQ267101-201ENSMUST00000082562 73 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Gm22298-201ENSMUST00000082662 133 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Mir33-201ENSMUST00000083531 69 ntBASIC0.95□□□□□ -2.26
Trim28Q62318 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.94□□□□□ -2.26
Trim28Q62318 Gm24070-201ENSMUST00000104519 130 ntBASIC0.94□□□□□ -2.26
Trim28Q62318 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Trim28Q62318 Gm25993-201ENSMUST00000175391 80 ntBASIC0.94□□□□□ -2.26
Trim28Q62318 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.94□□□□□ -2.26
Trim28Q62318 Gm29344-201ENSMUST00000068143 210 ntBASIC0.94□□□□□ -2.26
Trim28Q62318 Gm25683-201ENSMUST00000083940 131 ntBASIC0.94□□□□□ -2.26
Trim28Q62318 Mir717-201ENSMUST00000102259 109 ntBASIC0.93□□□□□ -2.26
Trim28Q62318 Gm22401-201ENSMUST00000174927 117 ntBASIC0.93□□□□□ -2.26
Trim28Q62318 Mir15a-201ENSMUST00000175266 84 ntBASIC0.93□□□□□ -2.26
Trim28Q62318 Mir7079-201ENSMUST00000184697 69 ntBASIC0.93□□□□□ -2.26
Trim28Q62318 Gm42845-201ENSMUST00000197766 105 ntBASIC0.93□□□□□ -2.26
Trim28Q62318 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.93□□□□□ -2.26
Trim28Q62318 Gm25296-201ENSMUST00000082566 67 ntBASIC0.93□□□□□ -2.26
Trim28Q62318 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Gm24400-201ENSMUST00000157865 107 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Gm24723-201ENSMUST00000158233 132 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Gm25307-201ENSMUST00000158885 106 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Mir7010-201ENSMUST00000183464 63 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Gm44455-201ENSMUST00000200061 82 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Gm45125-201ENSMUST00000206908 151 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Mir101a-201ENSMUST00000083517 83 ntBASIC0.92□□□□□ -2.26
Trim28Q62318 Gm13577-201ENSMUST00000121365 205 ntBASIC0.91□□□□□ -2.26
Trim28Q62318 Gm23630-201ENSMUST00000175292 104 ntBASIC0.91□□□□□ -2.26
Trim28Q62318 Gm24323-201ENSMUST00000175342 77 ntBASIC0.91□□□□□ -2.26
Trim28Q62318 Gm27980-201ENSMUST00000184094 169 ntBASIC0.91□□□□□ -2.26
Trim28Q62318 Gm44327-201ENSMUST00000200068 117 ntBASIC0.91□□□□□ -2.26
Trim28Q62318 Snord32a-201ENSMUST00000083285 83 ntBASIC0.91□□□□□ -2.26
Trim28Q62318 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.9□□□□□ -2.27
Trim28Q62318 Gm24445-201ENSMUST00000083981 107 ntBASIC0.9□□□□□ -2.27
Trim28Q62318 Gm26052-201ENSMUST00000104646 84 ntBASIC0.89□□□□□ -2.27
Trim28Q62318 Gm24920-201ENSMUST00000083018 85 ntBASIC0.89□□□□□ -2.27
Trim28Q62318 Gm26491-201ENSMUST00000179268 121 ntBASIC0.88□□□□□ -2.27
Trim28Q62318 Mir6364-201ENSMUST00000183396 86 ntBASIC0.88□□□□□ -2.27
Trim28Q62318 Gm27263-201ENSMUST00000184760 76 ntBASIC0.88□□□□□ -2.27
Trim28Q62318 Gm24796-201ENSMUST00000104007 107 ntBASIC0.87□□□□□ -2.27
Trim28Q62318 Gm23961-201ENSMUST00000104685 97 ntBASIC0.87□□□□□ -2.27
Trim28Q62318 Gm20386-201ENSMUST00000174010 132 ntBASIC0.87□□□□□ -2.27
Trim28Q62318 Gm24797-201ENSMUST00000178103 107 ntBASIC0.87□□□□□ -2.27
Trim28Q62318 Gm22474-201ENSMUST00000179407 107 ntBASIC0.87□□□□□ -2.27
Trim28Q62318 Mir362-201ENSMUST00000093592 65 ntBASIC0.87□□□□□ -2.27
Trim28Q62318 Gm25524-201ENSMUST00000101821 107 ntBASIC0.86□□□□□ -2.27
Trim28Q62318 Mir695-201ENSMUST00000102261 109 ntBASIC0.85□□□□□ -2.27
Trim28Q62318 Gm23783-201ENSMUST00000157941 102 ntBASIC0.85□□□□□ -2.27
Trim28Q62318 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.85□□□□□ -2.27
Trim28Q62318 Gm24259-201ENSMUST00000083740 107 ntBASIC0.85□□□□□ -2.27
Trim28Q62318 Gm22340-201ENSMUST00000157717 114 ntBASIC0.84□□□□□ -2.27
Trim28Q62318 Gm22016-201ENSMUST00000158793 114 ntBASIC0.84□□□□□ -2.27
Trim28Q62318 Gm23017-201ENSMUST00000177583 72 ntBASIC0.84□□□□□ -2.27
Trim28Q62318 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trim28Q62318 Gm24996-201ENSMUST00000158390 99 ntBASIC0.83□□□□□ -2.28
Trim28Q62318 Gm22455-201ENSMUST00000082580 71 ntBASIC0.83□□□□□ -2.28
Trim28Q62318 Mir23a-201ENSMUST00000083677 75 ntBASIC0.83□□□□□ -2.28
Trim28Q62318 Gm23573-201ENSMUST00000104408 107 ntBASIC0.82□□□□□ -2.28
Trim28Q62318 Gm23955-201ENSMUST00000157214 100 ntBASIC0.82□□□□□ -2.28
Trim28Q62318 Gm23036-201ENSMUST00000157885 99 ntBASIC0.82□□□□□ -2.28
Trim28Q62318 Mir363-201ENSMUST00000093598 75 ntBASIC0.82□□□□□ -2.28
Trim28Q62318 Gm24377-201ENSMUST00000104398 131 ntBASIC0.81□□□□□ -2.28
Trim28Q62318 Gm23590-201ENSMUST00000157661 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 151.7 ms