Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Mir344-201ENSMUST00000083634 95 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Mir7010-201ENSMUST00000183464 63 ntBASIC1.2□□□□□ -2.22
Rnf43Q5NCP0 Gm25309-201ENSMUST00000116728 126 ntBASIC1.19□□□□□ -2.22
Rnf43Q5NCP0 Gm25138-201ENSMUST00000083248 136 ntBASIC1.19□□□□□ -2.22
Rnf43Q5NCP0 Gm25506-201ENSMUST00000104339 70 ntBASIC1.18□□□□□ -2.22
Rnf43Q5NCP0 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.18□□□□□ -2.22
Rnf43Q5NCP0 Gm22165-201ENSMUST00000158414 103 ntBASIC1.18□□□□□ -2.22
Rnf43Q5NCP0 Gm22074-201ENSMUST00000158595 113 ntBASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 Gm26363-201ENSMUST00000158866 83 ntBASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 Gm22474-201ENSMUST00000179407 107 ntBASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 DQ267101-201ENSMUST00000082562 73 ntBASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 Gm25894-201ENSMUST00000083458 75 ntBASIC1.17□□□□□ -2.22
Rnf43Q5NCP0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm25087-201ENSMUST00000101992 78 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm22485-201ENSMUST00000157990 109 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm23893-201ENSMUST00000158106 134 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm24996-201ENSMUST00000158390 99 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm27980-201ENSMUST00000184094 169 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm45125-201ENSMUST00000206908 151 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Mir10b-201ENSMUST00000083566 68 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm26467-201ENSMUST00000097257 78 ntBASIC1.16□□□□□ -2.22
Rnf43Q5NCP0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Rnf43Q5NCP0 Gm23590-201ENSMUST00000157661 104 ntBASIC1.15□□□□□ -2.23
Rnf43Q5NCP0 Gm24321-201ENSMUST00000175348 80 ntBASIC1.15□□□□□ -2.23
Rnf43Q5NCP0 Gm38274-201ENSMUST00000195689 148 ntBASIC1.15□□□□□ -2.23
Rnf43Q5NCP0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.15□□□□□ -2.23
Rnf43Q5NCP0 Mir1904-201ENSMUST00000122702 80 ntBASIC1.14□□□□□ -2.23
Rnf43Q5NCP0 Gm25993-201ENSMUST00000175391 80 ntBASIC1.14□□□□□ -2.23
Rnf43Q5NCP0 Gm26491-201ENSMUST00000179268 121 ntBASIC1.14□□□□□ -2.23
Rnf43Q5NCP0 Gm24259-201ENSMUST00000083740 107 ntBASIC1.14□□□□□ -2.23
Rnf43Q5NCP0 Mir717-201ENSMUST00000102259 109 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm23036-201ENSMUST00000157885 99 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm22965-201ENSMUST00000157958 101 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm24723-201ENSMUST00000158233 132 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm24797-201ENSMUST00000178103 107 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm27974-201ENSMUST00000183415 105 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.13□□□□□ -2.23
Rnf43Q5NCP0 Gm25307-201ENSMUST00000158885 106 ntBASIC1.12□□□□□ -2.23
Rnf43Q5NCP0 Gm25296-201ENSMUST00000082566 67 ntBASIC1.11□□□□□ -2.23
Rnf43Q5NCP0 Gm23347-201ENSMUST00000083823 82 ntBASIC1.11□□□□□ -2.23
Rnf43Q5NCP0 Gm44327-201ENSMUST00000200068 117 ntBASIC1.1□□□□□ -2.23
Rnf43Q5NCP0 Gm25802-201ENSMUST00000082639 77 ntBASIC1.1□□□□□ -2.23
Rnf43Q5NCP0 Snord32a-201ENSMUST00000083285 83 ntBASIC1.1□□□□□ -2.23
Rnf43Q5NCP0 Mir6381-201ENSMUST00000183426 87 ntBASIC1.09□□□□□ -2.23
Rnf43Q5NCP0 Gm27943-201ENSMUST00000184844 116 ntBASIC1.09□□□□□ -2.23
Rnf43Q5NCP0 Gm22298-201ENSMUST00000082662 133 ntBASIC1.09□□□□□ -2.23
Rnf43Q5NCP0 Snord35a-201ENSMUST00000083884 90 ntBASIC1.09□□□□□ -2.23
Rnf43Q5NCP0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Rnf43Q5NCP0 Gm27587-201ENSMUST00000185116 163 ntBASIC1.08□□□□□ -2.24
Rnf43Q5NCP0 Gm22016-201ENSMUST00000158793 114 ntBASIC1.07□□□□□ -2.24
Rnf43Q5NCP0 Gm26007-201ENSMUST00000158798 120 ntBASIC1.07□□□□□ -2.24
Rnf43Q5NCP0 Gm22542-201ENSMUST00000158166 95 ntBASIC1.06□□□□□ -2.24
Rnf43Q5NCP0 Gm27263-201ENSMUST00000184760 76 ntBASIC1.06□□□□□ -2.24
Rnf43Q5NCP0 Gm42845-201ENSMUST00000197766 105 ntBASIC1.06□□□□□ -2.24
Rnf43Q5NCP0 Gm44455-201ENSMUST00000200061 82 ntBASIC1.06□□□□□ -2.24
Rnf43Q5NCP0 Mir22-201ENSMUST00000083595 95 ntBASIC1.06□□□□□ -2.24
Rnf43Q5NCP0 Gm22469-201ENSMUST00000104118 133 ntBASIC1.05□□□□□ -2.24
Rnf43Q5NCP0 Gm24777-201ENSMUST00000157644 107 ntBASIC1.05□□□□□ -2.24
Rnf43Q5NCP0 Mir7091-201ENSMUST00000184075 79 ntBASIC1.05□□□□□ -2.24
Rnf43Q5NCP0 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.05□□□□□ -2.24
Rnf43Q5NCP0 Mir27b-201ENSMUST00000083541 73 ntBASIC1.05□□□□□ -2.24
Rnf43Q5NCP0 Gm24796-201ENSMUST00000104007 107 ntBASIC1.04□□□□□ -2.24
Rnf43Q5NCP0 Gm24920-201ENSMUST00000083018 85 ntBASIC1.04□□□□□ -2.24
Rnf43Q5NCP0 Gm24678-201ENSMUST00000158756 104 ntBASIC1.03□□□□□ -2.24
Rnf43Q5NCP0 Gm24508-201ENSMUST00000180104 107 ntBASIC1.03□□□□□ -2.24
Rnf43Q5NCP0 Mir200a-201ENSMUST00000083466 90 ntBASIC1.03□□□□□ -2.24
Rnf43Q5NCP0 Gm23961-201ENSMUST00000104685 97 ntBASIC1.02□□□□□ -2.25
Rnf43Q5NCP0 Gm23180-201ENSMUST00000158686 125 ntBASIC1.02□□□□□ -2.25
Rnf43Q5NCP0 Gm23008-201ENSMUST00000158946 80 ntBASIC1.02□□□□□ -2.25
Rnf43Q5NCP0 Mir6364-201ENSMUST00000183396 86 ntBASIC1.02□□□□□ -2.25
Rnf43Q5NCP0 Mir23a-201ENSMUST00000083677 75 ntBASIC1.02□□□□□ -2.25
Rnf43Q5NCP0 Gm25326-201ENSMUST00000101903 107 ntBASIC1.01□□□□□ -2.25
Rnf43Q5NCP0 Gm23020-201ENSMUST00000158766 253 ntBASIC1.01□□□□□ -2.25
Rnf43Q5NCP0 Mir695-201ENSMUST00000102261 109 ntBASIC1□□□□□ -2.25
Rnf43Q5NCP0 Snord57-201ENSMUST00000083338 72 ntBASIC1□□□□□ -2.25
Rnf43Q5NCP0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1□□□□□ -2.25
Rnf43Q5NCP0 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Rnf43Q5NCP0 Gm23494-201ENSMUST00000116830 126 ntBASIC0.99□□□□□ -2.25
Rnf43Q5NCP0 Gm23017-201ENSMUST00000177583 72 ntBASIC0.99□□□□□ -2.25
Rnf43Q5NCP0 Gm22746-201ENSMUST00000082494 107 ntBASIC0.99□□□□□ -2.25
Rnf43Q5NCP0 Gm22303-201ENSMUST00000082686 122 ntBASIC0.99□□□□□ -2.25
Rnf43Q5NCP0 Gm26052-201ENSMUST00000104646 84 ntBASIC0.98□□□□□ -2.25
Rnf43Q5NCP0 Gm23955-201ENSMUST00000157214 100 ntBASIC0.98□□□□□ -2.25
Rnf43Q5NCP0 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.98□□□□□ -2.25
Rnf43Q5NCP0 Mir362-201ENSMUST00000093592 65 ntBASIC0.98□□□□□ -2.25
Rnf43Q5NCP0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Rnf43Q5NCP0 Gm24377-201ENSMUST00000104398 131 ntBASIC0.97□□□□□ -2.25
Rnf43Q5NCP0 Gm23573-201ENSMUST00000104408 107 ntBASIC0.97□□□□□ -2.25
Rnf43Q5NCP0 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.97□□□□□ -2.25
Rnf43Q5NCP0 Snora62-201ENSMUST00000082991 149 ntBASIC0.97□□□□□ -2.25
Rnf43Q5NCP0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.96□□□□□ -2.26
Rnf43Q5NCP0 Mir6380-201ENSMUST00000184334 81 ntBASIC0.96□□□□□ -2.26
Rnf43Q5NCP0 Gm22455-201ENSMUST00000082580 71 ntBASIC0.96□□□□□ -2.26
Rnf43Q5NCP0 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms