Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm23653-201ENSMUST00000116751 97 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Gm22381-201ENSMUST00000158186 107 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.63□□□□□ -2.51
Trim40Q3UWA4 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.63□□□□□ -2.51
Trim40Q3UWA4 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.63□□□□□ -2.51
Trim40Q3UWA4 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.64□□□□□ -2.51
Trim40Q3UWA4 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.64□□□□□ -2.51
Trim40Q3UWA4 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.65□□□□□ -2.51
Trim40Q3UWA4 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.65□□□□□ -2.51
Trim40Q3UWA4 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Mir741-201ENSMUST00000103931 71 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm25322-201ENSMUST00000122556 104 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Mir96-201ENSMUST00000083652 106 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24162-201ENSMUST00000093665 102 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Mir717-201ENSMUST00000102259 109 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm25964-201ENSMUST00000157171 97 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm26456-201ENSMUST00000082831 111 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.73□□□□□ -2.53
Trim40Q3UWA4 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.74□□□□□ -2.53
Trim40Q3UWA4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.77□□□□□ -2.53
Trim40Q3UWA4 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.77□□□□□ -2.53
Trim40Q3UWA4 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.78□□□□□ -2.53
Trim40Q3UWA4 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.79□□□□□ -2.54
Trim40Q3UWA4 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.79□□□□□ -2.54
Trim40Q3UWA4 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms