Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Gm28047Q3US59 Gm25993-201ENSMUST00000175391 80 ntBASIC1.47□□□□□ -2.17
Gm28047Q3US59 Snord96a-201ENSMUST00000082791 81 ntBASIC1.47□□□□□ -2.17
Gm28047Q3US59 Mir23a-201ENSMUST00000083677 75 ntBASIC1.47□□□□□ -2.17
Gm28047Q3US59 Mir669m-2-201ENSMUST00000158355 98 ntBASIC1.46□□□□□ -2.18
Gm28047Q3US59 Traj60-201ENSMUST00000167781 54 ntBASIC1.46□□□□□ -2.18
Gm28047Q3US59 Gm23494-201ENSMUST00000116830 126 ntBASIC1.45□□□□□ -2.18
Gm28047Q3US59 Gm25715-201ENSMUST00000158627 125 ntBASIC1.45□□□□□ -2.18
Gm28047Q3US59 Gm25307-201ENSMUST00000158885 106 ntBASIC1.45□□□□□ -2.18
Gm28047Q3US59 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.45□□□□□ -2.18
Gm28047Q3US59 Gm24865-201ENSMUST00000103246 96 ntBASIC1.44□□□□□ -2.18
Gm28047Q3US59 Gm25170-201ENSMUST00000104191 129 ntBASIC1.44□□□□□ -2.18
Gm28047Q3US59 Gm25495-201ENSMUST00000104431 131 ntBASIC1.44□□□□□ -2.18
Gm28047Q3US59 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.44□□□□□ -2.18
Gm28047Q3US59 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.44□□□□□ -2.18
Gm28047Q3US59 Gm44490-201ENSMUST00000198566 127 ntBASIC1.44□□□□□ -2.18
Gm28047Q3US59 Gm25296-201ENSMUST00000082566 67 ntBASIC1.44□□□□□ -2.18
Gm28047Q3US59 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Gm28047Q3US59 Gm22785-201ENSMUST00000104087 132 ntBASIC1.43□□□□□ -2.18
Gm28047Q3US59 Gm12432-201ENSMUST00000119540 186 ntBASIC1.43□□□□□ -2.18
Gm28047Q3US59 Gm25049-201ENSMUST00000158597 73 ntBASIC1.43□□□□□ -2.18
Gm28047Q3US59 Mir343-201ENSMUST00000102360 75 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm23329-201ENSMUST00000157415 108 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm22520-201ENSMUST00000158269 129 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm23410-201ENSMUST00000179967 107 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm27980-201ENSMUST00000184094 169 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm22505-201ENSMUST00000082956 108 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm22363-201ENSMUST00000083100 108 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm23814-201ENSMUST00000083230 102 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Mir211-201ENSMUST00000083651 106 ntBASIC1.42□□□□□ -2.18
Gm28047Q3US59 Gm23130-201ENSMUST00000104252 74 ntBASIC1.41□□□□□ -2.18
Gm28047Q3US59 Mir30a-201ENSMUST00000083471 71 ntBASIC1.41□□□□□ -2.18
Gm28047Q3US59 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Gm28047Q3US59 Gm26301-201ENSMUST00000104813 95 ntBASIC1.4□□□□□ -2.19
Gm28047Q3US59 Gm23173-201ENSMUST00000157161 160 ntBASIC1.4□□□□□ -2.19
Gm28047Q3US59 Gm25968-201ENSMUST00000157167 100 ntBASIC1.4□□□□□ -2.19
Gm28047Q3US59 Gm22559-201ENSMUST00000157329 134 ntBASIC1.4□□□□□ -2.19
Gm28047Q3US59 Gm27711-201ENSMUST00000183802 118 ntBASIC1.4□□□□□ -2.19
Gm28047Q3US59 Mir7059-201ENSMUST00000184825 59 ntBASIC1.4□□□□□ -2.19
Gm28047Q3US59 Mir1954-201ENSMUST00000175595 86 ntBASIC1.39□□□□□ -2.19
Gm28047Q3US59 Gm44483-201ENSMUST00000197203 97 ntBASIC1.39□□□□□ -2.19
Gm28047Q3US59 Gm42845-201ENSMUST00000197766 105 ntBASIC1.39□□□□□ -2.19
Gm28047Q3US59 Snora62-201ENSMUST00000082991 149 ntBASIC1.39□□□□□ -2.19
Gm28047Q3US59 Gm23245-201ENSMUST00000083370 135 ntBASIC1.39□□□□□ -2.19
Gm28047Q3US59 Mir500-201ENSMUST00000093600 92 ntBASIC1.39□□□□□ -2.19
Gm28047Q3US59 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Gm28047Q3US59 Gm26274-201ENSMUST00000157103 321 ntBASIC1.38□□□□□ -2.19
Gm28047Q3US59 Gm22485-201ENSMUST00000157990 109 ntBASIC1.38□□□□□ -2.19
Gm28047Q3US59 Mir7063-201ENSMUST00000184158 91 ntBASIC1.38□□□□□ -2.19
Gm28047Q3US59 Gm25791-201ENSMUST00000083292 137 ntBASIC1.38□□□□□ -2.19
Gm28047Q3US59 Mir324-201ENSMUST00000083600 89 ntBASIC1.38□□□□□ -2.19
Gm28047Q3US59 Gm6272-201ENSMUST00000121256 171 ntBASIC1.37□□□□□ -2.19
Gm28047Q3US59 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.37□□□□□ -2.19
Gm28047Q3US59 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.37□□□□□ -2.19
Gm28047Q3US59 Gm22980-201ENSMUST00000082608 70 ntBASIC1.37□□□□□ -2.19
Gm28047Q3US59 Mir200b-201ENSMUST00000083615 70 ntBASIC1.36□□□□□ -2.19
Gm28047Q3US59 Mir7052-201ENSMUST00000184821 65 ntBASIC1.35□□□□□ -2.19
Gm28047Q3US59 Gm23240-201ENSMUST00000083009 121 ntBASIC1.35□□□□□ -2.19
Gm28047Q3US59 Mir6394-201ENSMUST00000184738 99 ntBASIC1.34□□□□□ -2.19
Gm28047Q3US59 Mir448-201ENSMUST00000083516 112 ntBASIC1.34□□□□□ -2.19
Gm28047Q3US59 Mir297b-201ENSMUST00000102268 109 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm23989-201ENSMUST00000117030 66 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm22542-201ENSMUST00000158166 95 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm22925-201ENSMUST00000174956 102 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm22455-201ENSMUST00000082580 71 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm24920-201ENSMUST00000083018 85 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm25128-201ENSMUST00000083339 76 ntBASIC1.33□□□□□ -2.2
Gm28047Q3US59 Gm24342-201ENSMUST00000103907 104 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Gm25275-201ENSMUST00000104297 129 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Gm23328-201ENSMUST00000157418 132 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Gm26363-201ENSMUST00000158866 83 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Gm23992-201ENSMUST00000174981 67 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Snord58b-201ENSMUST00000082937 66 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Gm24252-201ENSMUST00000083700 132 ntBASIC1.32□□□□□ -2.2
Gm28047Q3US59 Gm22780-201ENSMUST00000104084 132 ntBASIC1.31□□□□□ -2.2
Gm28047Q3US59 Gm27656-201ENSMUST00000185055 80 ntBASIC1.31□□□□□ -2.2
Gm28047Q3US59 Gm27587-201ENSMUST00000185116 163 ntBASIC1.31□□□□□ -2.2
Gm28047Q3US59 Gm38323-201ENSMUST00000192450 210 ntBASIC1.31□□□□□ -2.2
Gm28047Q3US59 Gm44303-201ENSMUST00000196348 83 ntBASIC1.31□□□□□ -2.2
Gm28047Q3US59 Gm24278-201ENSMUST00000104239 127 ntBASIC1.3□□□□□ -2.2
Gm28047Q3US59 Gm24808-201ENSMUST00000157993 118 ntBASIC1.3□□□□□ -2.2
Gm28047Q3US59 Gm23340-201ENSMUST00000158955 123 ntBASIC1.29□□□□□ -2.2
Gm28047Q3US59 Gm25158-201ENSMUST00000177681 121 ntBASIC1.29□□□□□ -2.2
Gm28047Q3US59 Gm26229-201ENSMUST00000179699 121 ntBASIC1.29□□□□□ -2.2
Gm28047Q3US59 Gm27798-201ENSMUST00000184989 71 ntBASIC1.29□□□□□ -2.2
Gm28047Q3US59 Gm25894-201ENSMUST00000083458 75 ntBASIC1.29□□□□□ -2.2
Gm28047Q3US59 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
Gm28047Q3US59 Gm23020-201ENSMUST00000158766 253 ntBASIC1.28□□□□□ -2.2
Gm28047Q3US59 Gm27420-201ENSMUST00000183823 79 ntBASIC1.28□□□□□ -2.2
Gm28047Q3US59 Gm44327-201ENSMUST00000200068 117 ntBASIC1.28□□□□□ -2.2
Gm28047Q3US59 mt-Tw-201ENSMUST00000082397 67 ntBASIC1.28□□□□□ -2.2
Gm28047Q3US59 Gm26224-201ENSMUST00000082506 80 ntBASIC1.28□□□□□ -2.2
Gm28047Q3US59 Snord71-201ENSMUST00000104361 85 ntBASIC1.27□□□□□ -2.21
Gm28047Q3US59 Gm23636-201ENSMUST00000175070 95 ntBASIC1.27□□□□□ -2.21
Gm28047Q3US59 Mir6985-201ENSMUST00000184641 61 ntBASIC1.27□□□□□ -2.21
Gm28047Q3US59 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Gm28047Q3US59 Gm24321-201ENSMUST00000175348 80 ntBASIC1.26□□□□□ -2.21
Gm28047Q3US59 Gm44458-201ENSMUST00000196594 143 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 212.4 ms