Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm26227-201ENSMUST00000082510 101 ntBASIC1.38□□□□□ -2.19
Col6a2Q02788 Gm23494-201ENSMUST00000116830 126 ntBASIC1.37□□□□□ -2.19
Col6a2Q02788 Gm23989-201ENSMUST00000117030 66 ntBASIC1.37□□□□□ -2.19
Col6a2Q02788 Gm24808-201ENSMUST00000157993 118 ntBASIC1.37□□□□□ -2.19
Col6a2Q02788 Gm22520-201ENSMUST00000158269 129 ntBASIC1.37□□□□□ -2.19
Col6a2Q02788 Mir125b-1-201ENSMUST00000175613 77 ntBASIC1.37□□□□□ -2.19
Col6a2Q02788 Gm22542-201ENSMUST00000158166 95 ntBASIC1.36□□□□□ -2.19
Col6a2Q02788 Gm26224-201ENSMUST00000082506 80 ntBASIC1.36□□□□□ -2.19
Col6a2Q02788 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Col6a2Q02788 Gm24500-201ENSMUST00000158447 124 ntBASIC1.35□□□□□ -2.19
Col6a2Q02788 Gm27587-201ENSMUST00000185116 163 ntBASIC1.35□□□□□ -2.19
Col6a2Q02788 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.35□□□□□ -2.19
Col6a2Q02788 Gm25296-201ENSMUST00000082566 67 ntBASIC1.35□□□□□ -2.19
Col6a2Q02788 Gm23221-201ENSMUST00000158118 93 ntBASIC1.34□□□□□ -2.19
Col6a2Q02788 Gm24942-201ENSMUST00000158328 114 ntBASIC1.34□□□□□ -2.19
Col6a2Q02788 Gm44483-201ENSMUST00000197203 97 ntBASIC1.34□□□□□ -2.19
Col6a2Q02788 Gm42845-201ENSMUST00000197766 105 ntBASIC1.34□□□□□ -2.19
Col6a2Q02788 Gm23020-201ENSMUST00000158766 253 ntBASIC1.33□□□□□ -2.2
Col6a2Q02788 Mir7665-201ENSMUST00000184907 63 ntBASIC1.33□□□□□ -2.2
Col6a2Q02788 Gm24271-201ENSMUST00000102327 111 ntBASIC1.32□□□□□ -2.2
Col6a2Q02788 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col6a2Q02788 Gm24194-201ENSMUST00000116805 90 ntBASIC1.32□□□□□ -2.2
Col6a2Q02788 Mir6240-201ENSMUST00000184281 117 ntBASIC1.32□□□□□ -2.2
Col6a2Q02788 Mir6962-201ENSMUST00000199512 63 ntBASIC1.32□□□□□ -2.2
Col6a2Q02788 Gm43911-201ENSMUST00000203097 76 ntBASIC1.32□□□□□ -2.2
Col6a2Q02788 Gm22056-201ENSMUST00000083386 81 ntBASIC1.32□□□□□ -2.2
Col6a2Q02788 Gm26082-201ENSMUST00000104070 127 ntBASIC1.31□□□□□ -2.2
Col6a2Q02788 Gm23853-201ENSMUST00000158375 104 ntBASIC1.31□□□□□ -2.2
Col6a2Q02788 Gm27711-201ENSMUST00000183802 118 ntBASIC1.31□□□□□ -2.2
Col6a2Q02788 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.31□□□□□ -2.2
Col6a2Q02788 Snora62-201ENSMUST00000082991 149 ntBASIC1.31□□□□□ -2.2
Col6a2Q02788 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col6a2Q02788 Gm24372-201ENSMUST00000104400 110 ntBASIC1.3□□□□□ -2.2
Col6a2Q02788 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Col6a2Q02788 mt-Tw-201ENSMUST00000082397 67 ntBASIC1.3□□□□□ -2.2
Col6a2Q02788 Gm25128-201ENSMUST00000083339 76 ntBASIC1.3□□□□□ -2.2
Col6a2Q02788 Gm22559-201ENSMUST00000157329 134 ntBASIC1.29□□□□□ -2.2
Col6a2Q02788 Mir343-201ENSMUST00000102360 75 ntBASIC1.28□□□□□ -2.2
Col6a2Q02788 Gm24379-201ENSMUST00000122695 86 ntBASIC1.28□□□□□ -2.2
Col6a2Q02788 Mir7010-201ENSMUST00000183464 63 ntBASIC1.28□□□□□ -2.2
Col6a2Q02788 Gm25275-201ENSMUST00000104297 129 ntBASIC1.27□□□□□ -2.21
Col6a2Q02788 Gm25495-201ENSMUST00000104431 131 ntBASIC1.27□□□□□ -2.21
Col6a2Q02788 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Col6a2Q02788 Gm24920-201ENSMUST00000083018 85 ntBASIC1.27□□□□□ -2.21
Col6a2Q02788 Mir211-201ENSMUST00000083651 106 ntBASIC1.27□□□□□ -2.21
Col6a2Q02788 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col6a2Q02788 Gm23173-201ENSMUST00000157161 160 ntBASIC1.26□□□□□ -2.21
Col6a2Q02788 Mir3079-201ENSMUST00000175428 90 ntBASIC1.26□□□□□ -2.21
Col6a2Q02788 Mir7063-201ENSMUST00000184158 91 ntBASIC1.26□□□□□ -2.21
Col6a2Q02788 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a2Q02788 Gm24278-201ENSMUST00000104239 127 ntBASIC1.25□□□□□ -2.21
Col6a2Q02788 Gm22233-201ENSMUST00000157464 114 ntBASIC1.25□□□□□ -2.21
Col6a2Q02788 Gm25868-201ENSMUST00000158253 114 ntBASIC1.25□□□□□ -2.21
Col6a2Q02788 Gm22074-201ENSMUST00000158595 113 ntBASIC1.25□□□□□ -2.21
Col6a2Q02788 Gm23416-201ENSMUST00000175520 95 ntBASIC1.25□□□□□ -2.21
Col6a2Q02788 Gm44327-201ENSMUST00000200068 117 ntBASIC1.25□□□□□ -2.21
Col6a2Q02788 Mir466f-1-201ENSMUST00000104779 94 ntBASIC1.24□□□□□ -2.21
Col6a2Q02788 Gm24321-201ENSMUST00000175348 80 ntBASIC1.24□□□□□ -2.21
Col6a2Q02788 AC161271.1-201ENSMUST00000226914 150 ntBASIC1.24□□□□□ -2.21
Col6a2Q02788 Gm22780-201ENSMUST00000104084 132 ntBASIC1.23□□□□□ -2.21
Col6a2Q02788 Gm23245-201ENSMUST00000083370 135 ntBASIC1.23□□□□□ -2.21
Col6a2Q02788 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col6a2Q02788 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.22□□□□□ -2.21
Col6a2Q02788 Gm23329-201ENSMUST00000157415 108 ntBASIC1.22□□□□□ -2.21
Col6a2Q02788 Mir3968-201ENSMUST00000175355 100 ntBASIC1.22□□□□□ -2.21
Col6a2Q02788 Gm27894-201ENSMUST00000184177 92 ntBASIC1.22□□□□□ -2.21
Col6a2Q02788 Gm22455-201ENSMUST00000082580 71 ntBASIC1.22□□□□□ -2.21
Col6a2Q02788 Gm25894-201ENSMUST00000083458 75 ntBASIC1.22□□□□□ -2.21
Col6a2Q02788 Gm23060-201ENSMUST00000102345 109 ntBASIC1.21□□□□□ -2.22
Col6a2Q02788 Gm23636-201ENSMUST00000175070 95 ntBASIC1.21□□□□□ -2.22
Col6a2Q02788 Mir8119-201ENSMUST00000183371 129 ntBASIC1.21□□□□□ -2.22
Col6a2Q02788 Mir7059-201ENSMUST00000184825 59 ntBASIC1.2□□□□□ -2.22
Col6a2Q02788 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
Col6a2Q02788 Gm24865-201ENSMUST00000103246 96 ntBASIC1.19□□□□□ -2.22
Col6a2Q02788 Gm22673-201ENSMUST00000104415 131 ntBASIC1.19□□□□□ -2.22
Col6a2Q02788 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.19□□□□□ -2.22
Col6a2Q02788 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.19□□□□□ -2.22
Col6a2Q02788 Gm27943-201ENSMUST00000184844 116 ntBASIC1.19□□□□□ -2.22
Col6a2Q02788 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.18□□□□□ -2.22
Col6a2Q02788 Gm25138-201ENSMUST00000083248 136 ntBASIC1.18□□□□□ -2.22
Col6a2Q02788 Gm23992-201ENSMUST00000174981 67 ntBASIC1.17□□□□□ -2.22
Col6a2Q02788 Gm23410-201ENSMUST00000179967 107 ntBASIC1.17□□□□□ -2.22
Col6a2Q02788 Gm22505-201ENSMUST00000082956 108 ntBASIC1.17□□□□□ -2.22
Col6a2Q02788 Gm22363-201ENSMUST00000083100 108 ntBASIC1.17□□□□□ -2.22
Col6a2Q02788 Gm23814-201ENSMUST00000083230 102 ntBASIC1.17□□□□□ -2.22
Col6a2Q02788 Gm42533-201ENSMUST00000196247 157 ntBASIC1.16□□□□□ -2.22
Col6a2Q02788 Gm25791-201ENSMUST00000083292 137 ntBASIC1.16□□□□□ -2.22
Col6a2Q02788 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col6a2Q02788 Gm23125-201ENSMUST00000157651 106 ntBASIC1.15□□□□□ -2.23
Col6a2Q02788 Mir7052-201ENSMUST00000184821 65 ntBASIC1.15□□□□□ -2.23
Col6a2Q02788 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.15□□□□□ -2.23
Col6a2Q02788 Gm24252-201ENSMUST00000083700 132 ntBASIC1.15□□□□□ -2.23
Col6a2Q02788 Snord67-201ENSMUST00000104033 111 ntBASIC1.14□□□□□ -2.23
Col6a2Q02788 Gm23328-201ENSMUST00000157418 132 ntBASIC1.14□□□□□ -2.23
Col6a2Q02788 Mir669m-2-201ENSMUST00000158355 98 ntBASIC1.14□□□□□ -2.23
Col6a2Q02788 Gm22925-201ENSMUST00000174956 102 ntBASIC1.14□□□□□ -2.23
Col6a2Q02788 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col6a2Q02788 Mir6896-201ENSMUST00000198033 73 ntBASIC1.14□□□□□ -2.23
Col6a2Q02788 Mir448-201ENSMUST00000083516 112 ntBASIC1.14□□□□□ -2.23
Col6a2Q02788 Gm12432-201ENSMUST00000119540 186 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 149.7 ms