Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.91□□□□□ -2.26
Ccdc9bA3KGF9 Gm27977-201ENSMUST00000185159 111 ntBASIC0.9□□□□□ -2.27
Ccdc9bA3KGF9 Gm25993-201ENSMUST00000175391 80 ntBASIC0.89□□□□□ -2.27
Ccdc9bA3KGF9 Mir7673-201ENSMUST00000184567 64 ntBASIC0.89□□□□□ -2.27
Ccdc9bA3KGF9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.89□□□□□ -2.27
Ccdc9bA3KGF9 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc9bA3KGF9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Ccdc9bA3KGF9 Mir22-201ENSMUST00000083595 95 ntBASIC0.89□□□□□ -2.27
Ccdc9bA3KGF9 Mir3105-201ENSMUST00000175480 85 ntBASIC0.88□□□□□ -2.27
Ccdc9bA3KGF9 Gm25354-201ENSMUST00000179110 105 ntBASIC0.88□□□□□ -2.27
Ccdc9bA3KGF9 Mir7229-201ENSMUST00000197062 53 ntBASIC0.88□□□□□ -2.27
Ccdc9bA3KGF9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.88□□□□□ -2.27
Ccdc9bA3KGF9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.88□□□□□ -2.27
Ccdc9bA3KGF9 Snord45b-201ENSMUST00000082797 71 ntBASIC0.88□□□□□ -2.27
Ccdc9bA3KGF9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.87□□□□□ -2.27
Ccdc9bA3KGF9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.87□□□□□ -2.27
Ccdc9bA3KGF9 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.87□□□□□ -2.27
Ccdc9bA3KGF9 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.86□□□□□ -2.27
Ccdc9bA3KGF9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Ccdc9bA3KGF9 Gm22459-201ENSMUST00000082577 108 ntBASIC0.86□□□□□ -2.27
Ccdc9bA3KGF9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.86□□□□□ -2.27
Ccdc9bA3KGF9 Gm25950-201ENSMUST00000175331 100 ntBASIC0.85□□□□□ -2.27
Ccdc9bA3KGF9 Gm25247-201ENSMUST00000175475 90 ntBASIC0.85□□□□□ -2.27
Ccdc9bA3KGF9 Mir219b-201ENSMUST00000198317 65 ntBASIC0.85□□□□□ -2.27
Ccdc9bA3KGF9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.84□□□□□ -2.27
Ccdc9bA3KGF9 Gm13577-201ENSMUST00000121365 205 ntBASIC0.84□□□□□ -2.27
Ccdc9bA3KGF9 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Ccdc9bA3KGF9 Mir3071-201ENSMUST00000093621 80 ntBASIC0.83□□□□□ -2.28
Ccdc9bA3KGF9 Gm22720-201ENSMUST00000122710 87 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Gm24772-201ENSMUST00000158507 110 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Gm26007-201ENSMUST00000158798 120 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.82□□□□□ -2.28
Ccdc9bA3KGF9 Gm23020-201ENSMUST00000158766 253 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Gm24331-201ENSMUST00000175099 67 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Gm23801-201ENSMUST00000175561 67 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Gm24485-201ENSMUST00000178283 67 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Mir6380-201ENSMUST00000184334 81 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Mir15b-201ENSMUST00000083646 64 ntBASIC0.81□□□□□ -2.28
Ccdc9bA3KGF9 Gm23856-201ENSMUST00000158380 99 ntBASIC0.8□□□□□ -2.28
Ccdc9bA3KGF9 Mir494-201ENSMUST00000093632 85 ntBASIC0.8□□□□□ -2.28
Ccdc9bA3KGF9 Mir670-201ENSMUST00000102380 100 ntBASIC0.79□□□□□ -2.28
Ccdc9bA3KGF9 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Ccdc9bA3KGF9 Gm24070-201ENSMUST00000104519 130 ntBASIC0.79□□□□□ -2.28
Ccdc9bA3KGF9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.79□□□□□ -2.28
Ccdc9bA3KGF9 Gm25296-201ENSMUST00000082566 67 ntBASIC0.79□□□□□ -2.28
Ccdc9bA3KGF9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Ccdc9bA3KGF9 Gm25440-201ENSMUST00000158279 154 ntBASIC0.78□□□□□ -2.28
Ccdc9bA3KGF9 Gm25010-201ENSMUST00000158403 65 ntBASIC0.78□□□□□ -2.28
Ccdc9bA3KGF9 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.78□□□□□ -2.28
Ccdc9bA3KGF9 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.78□□□□□ -2.28
Ccdc9bA3KGF9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm22048-201ENSMUST00000104721 89 ntBASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm25552-201ENSMUST00000158081 91 ntBASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm22087-201ENSMUST00000158339 88 ntBASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.77□□□□□ -2.29
Ccdc9bA3KGF9 Gm24884-201ENSMUST00000158784 119 ntBASIC0.76□□□□□ -2.29
Ccdc9bA3KGF9 Gm27607-201ENSMUST00000185162 122 ntBASIC0.76□□□□□ -2.29
Ccdc9bA3KGF9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.75□□□□□ -2.29
Ccdc9bA3KGF9 Gm24323-201ENSMUST00000175342 77 ntBASIC0.75□□□□□ -2.29
Ccdc9bA3KGF9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.75□□□□□ -2.29
Ccdc9bA3KGF9 Gm26257-201ENSMUST00000122500 107 ntBASIC0.73□□□□□ -2.29
Ccdc9bA3KGF9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.73□□□□□ -2.29
Ccdc9bA3KGF9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.73□□□□□ -2.29
Ccdc9bA3KGF9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.73□□□□□ -2.29
Ccdc9bA3KGF9 Gm24963-201ENSMUST00000157916 144 ntBASIC0.72□□□□□ -2.29
Ccdc9bA3KGF9 Gm44803-201ENSMUST00000204384 156 ntBASIC0.71□□□□□ -2.3
Ccdc9bA3KGF9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.7□□□□□ -2.3
Ccdc9bA3KGF9 Gm25309-201ENSMUST00000116728 126 ntBASIC0.69□□□□□ -2.3
Ccdc9bA3KGF9 Gm25375-201ENSMUST00000158157 135 ntBASIC0.69□□□□□ -2.3
Ccdc9bA3KGF9 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.69□□□□□ -2.3
Ccdc9bA3KGF9 Gm25497-201ENSMUST00000104425 132 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 Gm23590-201ENSMUST00000157661 104 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 Gm23649-201ENSMUST00000179007 107 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 Gm45125-201ENSMUST00000206908 151 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.68□□□□□ -2.3
Ccdc9bA3KGF9 Snord67-201ENSMUST00000104033 111 ntBASIC0.67□□□□□ -2.3
Ccdc9bA3KGF9 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Ccdc9bA3KGF9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.67□□□□□ -2.3
Ccdc9bA3KGF9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.67□□□□□ -2.3
Ccdc9bA3KGF9 Mir3065-201ENSMUST00000198674 87 ntBASIC0.67□□□□□ -2.3
Ccdc9bA3KGF9 Gm25275-201ENSMUST00000104297 129 ntBASIC0.66□□□□□ -2.3
Ccdc9bA3KGF9 Gm24400-201ENSMUST00000157865 107 ntBASIC0.66□□□□□ -2.3
Ccdc9bA3KGF9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.66□□□□□ -2.3
Ccdc9bA3KGF9 Gm24796-201ENSMUST00000104007 107 ntBASIC0.65□□□□□ -2.31
Ccdc9bA3KGF9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.65□□□□□ -2.31
Ccdc9bA3KGF9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.31
Ccdc9bA3KGF9 Gm22981-201ENSMUST00000082611 75 ntBASIC0.65□□□□□ -2.31
Ccdc9bA3KGF9 Gm24396-201ENSMUST00000116905 93 ntBASIC0.64□□□□□ -2.31
Ccdc9bA3KGF9 Gm22455-201ENSMUST00000082580 71 ntBASIC0.64□□□□□ -2.31
Ccdc9bA3KGF9 Mir18-201ENSMUST00000083469 96 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms