Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm24342-201ENSMUST00000103907 104 ntBASIC1.47□□□□□ -2.17
Nubp1Q9R060 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.47□□□□□ -2.17
Nubp1Q9R060 Mir3098-201ENSMUST00000175416 87 ntBASIC1.47□□□□□ -2.17
Nubp1Q9R060 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.47□□□□□ -2.17
Nubp1Q9R060 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.46□□□□□ -2.17
Nubp1Q9R060 Gm26301-201ENSMUST00000104813 95 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm23329-201ENSMUST00000157415 108 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm22386-201ENSMUST00000158192 129 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm25715-201ENSMUST00000158627 125 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm24226-201ENSMUST00000158826 97 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm25831-201ENSMUST00000158924 163 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm23245-201ENSMUST00000083370 135 ntBASIC1.46□□□□□ -2.18
Nubp1Q9R060 Gm27980-201ENSMUST00000184094 169 ntBASIC1.45□□□□□ -2.18
Nubp1Q9R060 Mir7673-201ENSMUST00000184567 64 ntBASIC1.45□□□□□ -2.18
Nubp1Q9R060 Gm27943-201ENSMUST00000184844 116 ntBASIC1.45□□□□□ -2.18
Nubp1Q9R060 DQ267101-201ENSMUST00000082562 73 ntBASIC1.44□□□□□ -2.18
Nubp1Q9R060 Gm27450-201ENSMUST00000104632 90 ntBASIC1.43□□□□□ -2.18
Nubp1Q9R060 Gm24321-201ENSMUST00000175348 80 ntBASIC1.43□□□□□ -2.18
Nubp1Q9R060 Gm23649-201ENSMUST00000179007 107 ntBASIC1.43□□□□□ -2.18
Nubp1Q9R060 Gm12432-201ENSMUST00000119540 186 ntBASIC1.42□□□□□ -2.18
Nubp1Q9R060 Gm25279-201ENSMUST00000122608 133 ntBASIC1.42□□□□□ -2.18
Nubp1Q9R060 Gm25055-201ENSMUST00000157369 76 ntBASIC1.42□□□□□ -2.18
Nubp1Q9R060 Mir6394-201ENSMUST00000184738 99 ntBASIC1.42□□□□□ -2.18
Nubp1Q9R060 Mir7059-201ENSMUST00000184825 59 ntBASIC1.42□□□□□ -2.18
Nubp1Q9R060 Mir448-201ENSMUST00000083516 112 ntBASIC1.42□□□□□ -2.18
Nubp1Q9R060 Gm26338-201ENSMUST00000102372 110 ntBASIC1.41□□□□□ -2.18
Nubp1Q9R060 Gm24288-201ENSMUST00000157630 144 ntBASIC1.41□□□□□ -2.18
Nubp1Q9R060 Gm25705-201ENSMUST00000083119 104 ntBASIC1.41□□□□□ -2.18
Nubp1Q9R060 Mir33-201ENSMUST00000083531 69 ntBASIC1.41□□□□□ -2.18
Nubp1Q9R060 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Nubp1Q9R060 Mir343-201ENSMUST00000102360 75 ntBASIC1.4□□□□□ -2.19
Nubp1Q9R060 Gm22078-201ENSMUST00000157593 103 ntBASIC1.4□□□□□ -2.19
Nubp1Q9R060 Gm28383-201ENSMUST00000187563 139 ntBASIC1.4□□□□□ -2.19
Nubp1Q9R060 Snord13-201ENSMUST00000157627 104 ntBASIC1.39□□□□□ -2.19
Nubp1Q9R060 Gm25183-201ENSMUST00000157752 106 ntBASIC1.39□□□□□ -2.19
Nubp1Q9R060 Gm22459-201ENSMUST00000082577 108 ntBASIC1.39□□□□□ -2.19
Nubp1Q9R060 Gm25894-201ENSMUST00000083458 75 ntBASIC1.39□□□□□ -2.19
Nubp1Q9R060 Mir320-201ENSMUST00000083594 82 ntBASIC1.39□□□□□ -2.19
Nubp1Q9R060 Mir344-201ENSMUST00000083634 95 ntBASIC1.39□□□□□ -2.19
Nubp1Q9R060 Gm23347-201ENSMUST00000083823 82 ntBASIC1.38□□□□□ -2.19
Nubp1Q9R060 Gm27974-201ENSMUST00000183415 105 ntBASIC1.37□□□□□ -2.19
Nubp1Q9R060 Gm27711-201ENSMUST00000183802 118 ntBASIC1.37□□□□□ -2.19
Nubp1Q9R060 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Nubp1Q9R060 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.37□□□□□ -2.19
Nubp1Q9R060 Gm44483-201ENSMUST00000197203 97 ntBASIC1.37□□□□□ -2.19
Nubp1Q9R060 Mir200a-201ENSMUST00000083466 90 ntBASIC1.37□□□□□ -2.19
Nubp1Q9R060 Gm26181-201ENSMUST00000157687 106 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Gm25440-201ENSMUST00000158279 154 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Gm22087-201ENSMUST00000158339 88 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Gm22074-201ENSMUST00000158595 113 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Mir6985-201ENSMUST00000184641 61 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Gm27656-201ENSMUST00000185055 80 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Gm24927-201ENSMUST00000083397 107 ntBASIC1.36□□□□□ -2.19
Nubp1Q9R060 Gm15115-201ENSMUST00000121145 264 ntBASIC1.35□□□□□ -2.19
Nubp1Q9R060 Mir6351-201ENSMUST00000183826 99 ntBASIC1.35□□□□□ -2.19
Nubp1Q9R060 Gm24624-201ENSMUST00000082617 164 ntBASIC1.35□□□□□ -2.19
Nubp1Q9R060 Snord71-201ENSMUST00000104361 85 ntBASIC1.34□□□□□ -2.19
Nubp1Q9R060 Gm23328-201ENSMUST00000157418 132 ntBASIC1.34□□□□□ -2.19
Nubp1Q9R060 Gm27587-201ENSMUST00000185116 163 ntBASIC1.34□□□□□ -2.19
Nubp1Q9R060 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.34□□□□□ -2.19
Nubp1Q9R060 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.34□□□□□ -2.19
Nubp1Q9R060 Gm25648-201ENSMUST00000177844 79 ntBASIC1.33□□□□□ -2.2
Nubp1Q9R060 Gm44458-201ENSMUST00000196594 143 ntBASIC1.33□□□□□ -2.2
Nubp1Q9R060 Gm44327-201ENSMUST00000200068 117 ntBASIC1.33□□□□□ -2.2
Nubp1Q9R060 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.33□□□□□ -2.2
Nubp1Q9R060 Gm24070-201ENSMUST00000104519 130 ntBASIC1.32□□□□□ -2.2
Nubp1Q9R060 Gm22542-201ENSMUST00000158166 95 ntBASIC1.32□□□□□ -2.2
Nubp1Q9R060 Gm23340-201ENSMUST00000158955 123 ntBASIC1.32□□□□□ -2.2
Nubp1Q9R060 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.32□□□□□ -2.2
Nubp1Q9R060 Mir7052-201ENSMUST00000184821 65 ntBASIC1.32□□□□□ -2.2
Nubp1Q9R060 Gm24252-201ENSMUST00000083700 132 ntBASIC1.32□□□□□ -2.2
Nubp1Q9R060 Gm23036-201ENSMUST00000157885 99 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Gm25010-201ENSMUST00000158403 65 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Gm25307-201ENSMUST00000158885 106 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Gm25993-201ENSMUST00000175391 80 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Gm27248-201ENSMUST00000184004 166 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.31□□□□□ -2.2
Nubp1Q9R060 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Nubp1Q9R060 Snord32a-201ENSMUST00000083285 83 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Mir3071-201ENSMUST00000093621 80 ntBASIC1.31□□□□□ -2.2
Nubp1Q9R060 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Nubp1Q9R060 Gm22559-201ENSMUST00000157329 134 ntBASIC1.3□□□□□ -2.2
Nubp1Q9R060 Gm23072-201ENSMUST00000158243 123 ntBASIC1.3□□□□□ -2.2
Nubp1Q9R060 Gm26139-201ENSMUST00000180098 107 ntBASIC1.3□□□□□ -2.2
Nubp1Q9R060 Gm44455-201ENSMUST00000200061 82 ntBASIC1.3□□□□□ -2.2
Nubp1Q9R060 Gm42506-201ENSMUST00000202009 150 ntBASIC1.3□□□□□ -2.2
Nubp1Q9R060 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.3□□□□□ -2.2
Nubp1Q9R060 Gm23122-201ENSMUST00000157645 103 ntBASIC1.29□□□□□ -2.2
Nubp1Q9R060 Gm22565-201ENSMUST00000175540 69 ntBASIC1.29□□□□□ -2.2
Nubp1Q9R060 Gm22780-201ENSMUST00000104084 132 ntBASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm22039-201ENSMUST00000157278 132 ntBASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm23590-201ENSMUST00000157661 104 ntBASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm23020-201ENSMUST00000158766 253 ntBASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm44962-201ENSMUST00000206460 279 ntBASIC1.28□□□□□ -2.2
Nubp1Q9R060 Gm22717-201ENSMUST00000122703 171 ntBASIC1.27□□□□□ -2.21
Nubp1Q9R060 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.27□□□□□ -2.21
Nubp1Q9R060 Gm29344-201ENSMUST00000068143 210 ntBASIC1.27□□□□□ -2.21
Nubp1Q9R060 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 174.3 ms