Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.21□□□□□ -2.44
Ddx28Q9CWT6 Gm42844-201ENSMUST00000200355 112 ntBASIC-0.21□□□□□ -2.44
Ddx28Q9CWT6 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.21□□□□□ -2.44
Ddx28Q9CWT6 AC132833.2-201ENSMUST00000228699 157 ntBASIC-0.22□□□□□ -2.44
Ddx28Q9CWT6 mt-Tf-201ENSMUST00000082387 68 ntBASIC-0.22□□□□□ -2.44
Ddx28Q9CWT6 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Mir327-201ENSMUST00000199328 69 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 mt-Tv-201ENSMUST00000082389 69 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm24705-201ENSMUST00000082808 107 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm25089-201ENSMUST00000102015 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25840-201ENSMUST00000177821 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24952-201ENSMUST00000177909 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23682-201ENSMUST00000178146 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24652-201ENSMUST00000178223 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22629-201ENSMUST00000178272 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24021-201ENSMUST00000178435 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22274-201ENSMUST00000178441 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22050-201ENSMUST00000178442 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23688-201ENSMUST00000178502 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23944-201ENSMUST00000178607 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm26283-201ENSMUST00000178625 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25452-201ENSMUST00000178776 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23286-201ENSMUST00000178963 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22640-201ENSMUST00000179035 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25984-201ENSMUST00000179129 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25585-201ENSMUST00000179469 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm26374-201ENSMUST00000179737 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24040-201ENSMUST00000179786 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25017-201ENSMUST00000179805 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23618-201ENSMUST00000179912 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm26284-201ENSMUST00000180107 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24570-201ENSMUST00000180314 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24654-201ENSMUST00000180315 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm22672-201ENSMUST00000104414 134 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Gm22140-201ENSMUST00000158745 120 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Mir191-201ENSMUST00000196210 74 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm25622-201ENSMUST00000157217 104 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm24605-201ENSMUST00000104772 96 ntBASIC-0.29□□□□□ -2.46
Ddx28Q9CWT6 Mir5619-201ENSMUST00000176065 61 ntBASIC-0.29□□□□□ -2.46
Ddx28Q9CWT6 Mir214-201ENSMUST00000083582 110 ntBASIC-0.29□□□□□ -2.46
Ddx28Q9CWT6 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.3□□□□□ -2.46
Ddx28Q9CWT6 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.3□□□□□ -2.46
Ddx28Q9CWT6 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.31□□□□□ -2.46
Ddx28Q9CWT6 Gm23653-201ENSMUST00000116751 97 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Mir141-201ENSMUST00000083540 72 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.33□□□□□ -2.46
Ddx28Q9CWT6 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.33□□□□□ -2.46
Ddx28Q9CWT6 Gm24384-201ENSMUST00000122693 75 ntBASIC-0.34□□□□□ -2.46
Ddx28Q9CWT6 Gm20108-201ENSMUST00000219977 153 ntBASIC-0.34□□□□□ -2.46
Ddx28Q9CWT6 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.34□□□□□ -2.46
Ddx28Q9CWT6 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Snora26-201ENSMUST00000175614 121 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm27686-201ENSMUST00000185123 91 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm24492-201ENSMUST00000083798 107 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
Ddx28Q9CWT6 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.36□□□□□ -2.47
Ddx28Q9CWT6 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm23261-201ENSMUST00000158316 136 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm24099-201ENSMUST00000083384 107 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm22004-201ENSMUST00000101884 107 ntBASIC-0.38□□□□□ -2.47
Ddx28Q9CWT6 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Ddx28Q9CWT6 Gm22770-201ENSMUST00000158368 67 ntBASIC-0.38□□□□□ -2.47
Ddx28Q9CWT6 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.39□□□□□ -2.47
Ddx28Q9CWT6 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.39□□□□□ -2.47
Ddx28Q9CWT6 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Ddx28Q9CWT6 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.4□□□□□ -2.47
Ddx28Q9CWT6 Gm22381-201ENSMUST00000158186 107 ntBASIC-0.41□□□□□ -2.48
Ddx28Q9CWT6 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.41□□□□□ -2.48
Ddx28Q9CWT6 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.41□□□□□ -2.48
Ddx28Q9CWT6 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm25449-201ENSMUST00000179389 79 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 299.7 ms