Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.21□□□□□ -2.44
Ddx28Q9CWT6 Gm42844-201ENSMUST00000200355 112 ntBASIC-0.21□□□□□ -2.44
Ddx28Q9CWT6 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.21□□□□□ -2.44
Ddx28Q9CWT6 AC132833.2-201ENSMUST00000228699 157 ntBASIC-0.22□□□□□ -2.44
Ddx28Q9CWT6 mt-Tf-201ENSMUST00000082387 68 ntBASIC-0.22□□□□□ -2.44
Ddx28Q9CWT6 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.23□□□□□ -2.45
Ddx28Q9CWT6 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Mir327-201ENSMUST00000199328 69 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 mt-Tv-201ENSMUST00000082389 69 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm24705-201ENSMUST00000082808 107 ntBASIC-0.24□□□□□ -2.45
Ddx28Q9CWT6 Gm25089-201ENSMUST00000102015 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25840-201ENSMUST00000177821 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24952-201ENSMUST00000177909 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23682-201ENSMUST00000178146 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24652-201ENSMUST00000178223 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22629-201ENSMUST00000178272 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24021-201ENSMUST00000178435 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22274-201ENSMUST00000178441 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22050-201ENSMUST00000178442 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23688-201ENSMUST00000178502 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23944-201ENSMUST00000178607 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm26283-201ENSMUST00000178625 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25452-201ENSMUST00000178776 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23286-201ENSMUST00000178963 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22640-201ENSMUST00000179035 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25984-201ENSMUST00000179129 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25585-201ENSMUST00000179469 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm26374-201ENSMUST00000179737 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24040-201ENSMUST00000179786 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm25017-201ENSMUST00000179805 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm23618-201ENSMUST00000179912 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm26284-201ENSMUST00000180107 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24570-201ENSMUST00000180314 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm24654-201ENSMUST00000180315 79 ntBASIC-0.25□□□□□ -2.45
Ddx28Q9CWT6 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm22672-201ENSMUST00000104414 134 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.26□□□□□ -2.45
Ddx28Q9CWT6 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Gm22140-201ENSMUST00000158745 120 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Mir191-201ENSMUST00000196210 74 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.27□□□□□ -2.45
Ddx28Q9CWT6 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm25622-201ENSMUST00000157217 104 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.28□□□□□ -2.45
Ddx28Q9CWT6 Gm24605-201ENSMUST00000104772 96 ntBASIC-0.29□□□□□ -2.46
Ddx28Q9CWT6 Mir5619-201ENSMUST00000176065 61 ntBASIC-0.29□□□□□ -2.46
Ddx28Q9CWT6 Mir214-201ENSMUST00000083582 110 ntBASIC-0.29□□□□□ -2.46
Ddx28Q9CWT6 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.3□□□□□ -2.46
Ddx28Q9CWT6 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.3□□□□□ -2.46
Ddx28Q9CWT6 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.31□□□□□ -2.46
Ddx28Q9CWT6 Gm23653-201ENSMUST00000116751 97 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Mir141-201ENSMUST00000083540 72 ntBASIC-0.32□□□□□ -2.46
Ddx28Q9CWT6 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.33□□□□□ -2.46
Ddx28Q9CWT6 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.33□□□□□ -2.46
Ddx28Q9CWT6 Gm24384-201ENSMUST00000122693 75 ntBASIC-0.34□□□□□ -2.46
Ddx28Q9CWT6 Gm20108-201ENSMUST00000219977 153 ntBASIC-0.34□□□□□ -2.46
Ddx28Q9CWT6 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.34□□□□□ -2.46
Ddx28Q9CWT6 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Snora26-201ENSMUST00000175614 121 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm27686-201ENSMUST00000185123 91 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm24492-201ENSMUST00000083798 107 ntBASIC-0.35□□□□□ -2.47
Ddx28Q9CWT6 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
Ddx28Q9CWT6 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.36□□□□□ -2.47
Ddx28Q9CWT6 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm23261-201ENSMUST00000158316 136 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm24099-201ENSMUST00000083384 107 ntBASIC-0.37□□□□□ -2.47
Ddx28Q9CWT6 Gm22004-201ENSMUST00000101884 107 ntBASIC-0.38□□□□□ -2.47
Ddx28Q9CWT6 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Ddx28Q9CWT6 Gm22770-201ENSMUST00000158368 67 ntBASIC-0.38□□□□□ -2.47
Ddx28Q9CWT6 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.39□□□□□ -2.47
Ddx28Q9CWT6 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.39□□□□□ -2.47
Ddx28Q9CWT6 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Ddx28Q9CWT6 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.4□□□□□ -2.47
Ddx28Q9CWT6 Gm22381-201ENSMUST00000158186 107 ntBASIC-0.41□□□□□ -2.48
Ddx28Q9CWT6 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.41□□□□□ -2.48
Ddx28Q9CWT6 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.41□□□□□ -2.48
Ddx28Q9CWT6 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm25449-201ENSMUST00000179389 79 ntBASIC-0.43□□□□□ -2.48
Ddx28Q9CWT6 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms