Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm44345-201ENSMUST00000199560 135 ntBASIC0.3□□□□□ -2.36
Usp11Q99K46 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.3□□□□□ -2.36
Usp11Q99K46 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Gm25756-201ENSMUST00000103990 136 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Scarna8-201ENSMUST00000158333 131 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Gm23197-201ENSMUST00000158809 112 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Gm26466-201ENSMUST00000179615 79 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Gm44803-201ENSMUST00000204384 156 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Gm20108-201ENSMUST00000219977 153 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Mir18-201ENSMUST00000083469 96 ntBASIC0.29□□□□□ -2.36
Usp11Q99K46 Gm25289-201ENSMUST00000122799 119 ntBASIC0.28□□□□□ -2.36
Usp11Q99K46 Gm26438-201ENSMUST00000082593 107 ntBASIC0.28□□□□□ -2.36
Usp11Q99K46 Mir710-201ENSMUST00000102088 110 ntBASIC0.27□□□□□ -2.37
Usp11Q99K46 Mir450b-201ENSMUST00000102095 82 ntBASIC0.27□□□□□ -2.37
Usp11Q99K46 Mir669f-201ENSMUST00000103850 121 ntBASIC0.27□□□□□ -2.37
Usp11Q99K46 Gm22088-201ENSMUST00000158341 117 ntBASIC0.27□□□□□ -2.37
Usp11Q99K46 Gm22981-201ENSMUST00000082611 75 ntBASIC0.27□□□□□ -2.37
Usp11Q99K46 Gm23531-201ENSMUST00000104567 68 ntBASIC0.26□□□□□ -2.37
Usp11Q99K46 Gm26425-201ENSMUST00000122529 82 ntBASIC0.26□□□□□ -2.37
Usp11Q99K46 Gm25055-201ENSMUST00000157369 76 ntBASIC0.26□□□□□ -2.37
Usp11Q99K46 Gm25656-201ENSMUST00000158466 66 ntBASIC0.26□□□□□ -2.37
Usp11Q99K46 Gm24884-201ENSMUST00000158784 119 ntBASIC0.26□□□□□ -2.37
Usp11Q99K46 Gm24833-201ENSMUST00000116775 120 ntBASIC0.25□□□□□ -2.37
Usp11Q99K46 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.25□□□□□ -2.37
Usp11Q99K46 Gm23278-201ENSMUST00000157911 143 ntBASIC0.25□□□□□ -2.37
Usp11Q99K46 Gm22732-201ENSMUST00000158093 121 ntBASIC0.25□□□□□ -2.37
Usp11Q99K46 Mir669h-201ENSMUST00000116944 125 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm25622-201ENSMUST00000157217 104 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm22845-201ENSMUST00000157712 104 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm23500-201ENSMUST00000157735 98 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm23020-201ENSMUST00000158766 253 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm26007-201ENSMUST00000158798 120 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm28001-201ENSMUST00000183561 117 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Mir5117-201ENSMUST00000083226 84 ntBASIC0.24□□□□□ -2.37
Usp11Q99K46 Gm24467-201ENSMUST00000157887 126 ntBASIC0.23□□□□□ -2.37
Usp11Q99K46 Gm23349-201ENSMUST00000158432 98 ntBASIC0.23□□□□□ -2.37
Usp11Q99K46 Mir3108-201ENSMUST00000175500 79 ntBASIC0.23□□□□□ -2.37
Usp11Q99K46 Gm25229-201ENSMUST00000178587 79 ntBASIC0.23□□□□□ -2.37
Usp11Q99K46 Gm25497-201ENSMUST00000104425 132 ntBASIC0.22□□□□□ -2.37
Usp11Q99K46 Gm23528-201ENSMUST00000104571 132 ntBASIC0.22□□□□□ -2.37
Usp11Q99K46 Gm25328-201ENSMUST00000175013 107 ntBASIC0.22□□□□□ -2.37
Usp11Q99K46 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.22□□□□□ -2.37
Usp11Q99K46 Gm24650-201ENSMUST00000157105 103 ntBASIC0.21□□□□□ -2.38
Usp11Q99K46 Gm27639-201ENSMUST00000184937 85 ntBASIC0.21□□□□□ -2.38
Usp11Q99K46 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Usp11Q99K46 AC122327.1-201ENSMUST00000220778 108 ntBASIC0.21□□□□□ -2.38
Usp11Q99K46 Gm22542-201ENSMUST00000158166 95 ntBASIC0.2□□□□□ -2.38
Usp11Q99K46 Gm23821-201ENSMUST00000158738 106 ntBASIC0.2□□□□□ -2.38
Usp11Q99K46 Gm25993-201ENSMUST00000175391 80 ntBASIC0.2□□□□□ -2.38
Usp11Q99K46 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Usp11Q99K46 Gm22677-201ENSMUST00000116977 108 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Gm22205-201ENSMUST00000122655 71 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Gm22605-201ENSMUST00000158289 108 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Gm24637-201ENSMUST00000158674 85 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Gm25307-201ENSMUST00000158885 106 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Mir3065-201ENSMUST00000198674 87 ntBASIC0.19□□□□□ -2.38
Usp11Q99K46 Gm14533-201ENSMUST00000117088 93 ntBASIC0.18□□□□□ -2.38
Usp11Q99K46 Gm24183-201ENSMUST00000122572 93 ntBASIC0.18□□□□□ -2.38
Usp11Q99K46 Gm25885-201ENSMUST00000157779 109 ntBASIC0.18□□□□□ -2.38
Usp11Q99K46 Gm23369-201ENSMUST00000175406 105 ntBASIC0.18□□□□□ -2.38
Usp11Q99K46 Gm22048-201ENSMUST00000104721 89 ntBASIC0.17□□□□□ -2.38
Usp11Q99K46 Mir8107-201ENSMUST00000184024 117 ntBASIC0.17□□□□□ -2.38
Usp11Q99K46 Gm24580-201ENSMUST00000103965 131 ntBASIC0.16□□□□□ -2.38
Usp11Q99K46 Gm22720-201ENSMUST00000122710 87 ntBASIC0.16□□□□□ -2.38
Usp11Q99K46 Gm25696-201ENSMUST00000082900 105 ntBASIC0.16□□□□□ -2.38
Usp11Q99K46 Gm25991-201ENSMUST00000102439 99 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 Gm23788-201ENSMUST00000122535 106 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 Gm25952-201ENSMUST00000175329 74 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 Gm29432-201ENSMUST00000185397 139 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 Gm26441-201ENSMUST00000082590 104 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 Mir363-201ENSMUST00000093598 75 ntBASIC0.15□□□□□ -2.39
Usp11Q99K46 Gm42677-201ENSMUST00000196363 127 ntBASIC0.14□□□□□ -2.39
Usp11Q99K46 Gm23761-201ENSMUST00000158347 104 ntBASIC0.12□□□□□ -2.39
Usp11Q99K46 Gm45617-201ENSMUST00000211132 209 ntBASIC0.12□□□□□ -2.39
Usp11Q99K46 Gm25296-201ENSMUST00000082566 67 ntBASIC0.12□□□□□ -2.39
Usp11Q99K46 Gm22729-201ENSMUST00000158088 129 ntBASIC0.11□□□□□ -2.39
Usp11Q99K46 Mir3089-201ENSMUST00000175350 84 ntBASIC0.11□□□□□ -2.39
Usp11Q99K46 Gm25870-201ENSMUST00000179845 79 ntBASIC0.11□□□□□ -2.39
Usp11Q99K46 Gm43038-201ENSMUST00000202359 88 ntBASIC0.11□□□□□ -2.39
Usp11Q99K46 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.11□□□□□ -2.39
Usp11Q99K46 Gm22354-201ENSMUST00000083919 70 ntBASIC0.11□□□□□ -2.39
Usp11Q99K46 Gm27975-201ENSMUST00000184400 101 ntBASIC0.1□□□□□ -2.39
Usp11Q99K46 Gm26207-201ENSMUST00000082909 104 ntBASIC0.1□□□□□ -2.39
Usp11Q99K46 Gm25791-201ENSMUST00000083292 137 ntBASIC0.1□□□□□ -2.39
Usp11Q99K46 Snord67-201ENSMUST00000104033 111 ntBASIC0.08□□□□□ -2.4
Usp11Q99K46 Gm22429-201ENSMUST00000158553 130 ntBASIC0.08□□□□□ -2.4
Usp11Q99K46 Gm37750-201ENSMUST00000193563 129 ntBASIC0.08□□□□□ -2.4
Usp11Q99K46 Gm44328-201ENSMUST00000199331 75 ntBASIC0.07□□□□□ -2.4
Usp11Q99K46 Gm24903-201ENSMUST00000158131 126 ntBASIC0.06□□□□□ -2.4
Usp11Q99K46 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.06□□□□□ -2.4
Usp11Q99K46 Gm22368-201ENSMUST00000102416 109 ntBASIC0.05□□□□□ -2.4
Usp11Q99K46 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Usp11Q99K46 Gm24796-201ENSMUST00000104007 107 ntBASIC0.05□□□□□ -2.4
Usp11Q99K46 Gm25322-201ENSMUST00000122556 104 ntBASIC0.05□□□□□ -2.4
Usp11Q99K46 Gm23468-201ENSMUST00000157125 108 ntBASIC0.05□□□□□ -2.4
Usp11Q99K46 Mir3967-201ENSMUST00000198710 68 ntBASIC0.05□□□□□ -2.4
Usp11Q99K46 Gm24162-201ENSMUST00000093665 102 ntBASIC0.05□□□□□ -2.4
Usp11Q99K46 Gm24793-201ENSMUST00000104289 132 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 149.4 ms