Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24983-201ENSMUST00000104457 69 ntBASIC1.11□□□□□ -2.23
Ccdc9Q8VC31 Gm25328-201ENSMUST00000175013 107 ntBASIC1.11□□□□□ -2.23
Ccdc9Q8VC31 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc9Q8VC31 Gm43944-201ENSMUST00000205220 120 ntBASIC1.11□□□□□ -2.23
Ccdc9Q8VC31 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.11□□□□□ -2.23
Ccdc9Q8VC31 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.1□□□□□ -2.23
Ccdc9Q8VC31 Snord45b-201ENSMUST00000082797 71 ntBASIC1.1□□□□□ -2.23
Ccdc9Q8VC31 Mir196b-201ENSMUST00000083509 85 ntBASIC1.1□□□□□ -2.23
Ccdc9Q8VC31 Gm22100-201ENSMUST00000157926 63 ntBASIC1.09□□□□□ -2.23
Ccdc9Q8VC31 Gm23114-201ENSMUST00000158478 117 ntBASIC1.09□□□□□ -2.23
Ccdc9Q8VC31 Snora75-201ENSMUST00000082903 133 ntBASIC1.09□□□□□ -2.23
Ccdc9Q8VC31 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.09□□□□□ -2.23
Ccdc9Q8VC31 Gm22786-201ENSMUST00000104086 122 ntBASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 Gm22078-201ENSMUST00000157593 103 ntBASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 Gm22340-201ENSMUST00000157717 114 ntBASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 Gm27420-201ENSMUST00000183823 79 ntBASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 Gm38113-201ENSMUST00000193704 201 ntBASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.08□□□□□ -2.24
Ccdc9Q8VC31 Gm23301-201ENSMUST00000082713 65 ntBASIC1.07□□□□□ -2.24
Ccdc9Q8VC31 Gm27450-201ENSMUST00000104632 90 ntBASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Gm26257-201ENSMUST00000122500 107 ntBASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Snord2-201ENSMUST00000157899 69 ntBASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Gm24942-201ENSMUST00000158328 114 ntBASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Mir1933-201ENSMUST00000158930 88 ntBASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Mir22-201ENSMUST00000083595 95 ntBASIC1.06□□□□□ -2.24
Ccdc9Q8VC31 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Gm23130-201ENSMUST00000104252 74 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Gm23991-201ENSMUST00000117033 93 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Gm23500-201ENSMUST00000157735 98 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Mir3108-201ENSMUST00000175500 79 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Mir324-201ENSMUST00000083600 89 ntBASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ccdc9Q8VC31 Gm22039-201ENSMUST00000157278 132 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm25183-201ENSMUST00000157752 106 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm23783-201ENSMUST00000157941 102 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm22541-201ENSMUST00000158165 127 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm20386-201ENSMUST00000174010 132 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm22466-201ENSMUST00000175278 69 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Mir6342-201ENSMUST00000183870 125 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm25652-201ENSMUST00000083780 103 ntBASIC1.04□□□□□ -2.24
Ccdc9Q8VC31 Gm23708-201ENSMUST00000104367 123 ntBASIC1.03□□□□□ -2.24
Ccdc9Q8VC31 Mir876-201ENSMUST00000104659 81 ntBASIC1.03□□□□□ -2.24
Ccdc9Q8VC31 Gm25715-201ENSMUST00000158627 125 ntBASIC1.03□□□□□ -2.24
Ccdc9Q8VC31 Gm24549-201ENSMUST00000158647 139 ntBASIC1.03□□□□□ -2.24
Ccdc9Q8VC31 Mir7663-201ENSMUST00000183950 61 ntBASIC1.03□□□□□ -2.24
Ccdc9Q8VC31 Gm29432-201ENSMUST00000185397 139 ntBASIC1.03□□□□□ -2.24
Ccdc9Q8VC31 Gm24580-201ENSMUST00000103965 131 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Gm23072-201ENSMUST00000158243 123 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Mir100-201ENSMUST00000175270 80 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Gm27974-201ENSMUST00000183415 105 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Gm27554-201ENSMUST00000185074 98 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Gm45655-201ENSMUST00000211625 160 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Mir27b-201ENSMUST00000083541 73 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Mir10b-201ENSMUST00000083566 68 ntBASIC1.02□□□□□ -2.25
Ccdc9Q8VC31 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Gm25416-201ENSMUST00000104221 107 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Gm23649-201ENSMUST00000179007 107 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Mir376b-201ENSMUST00000195930 82 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Gm24201-201ENSMUST00000082946 125 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Mir377-201ENSMUST00000083504 68 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Mir15b-201ENSMUST00000083646 64 ntBASIC1.01□□□□□ -2.25
Ccdc9Q8VC31 Gm25040-201ENSMUST00000103877 66 ntBASIC1□□□□□ -2.25
Ccdc9Q8VC31 Gm26139-201ENSMUST00000180098 107 ntBASIC1□□□□□ -2.25
Ccdc9Q8VC31 Gm24927-201ENSMUST00000083397 107 ntBASIC1□□□□□ -2.25
Ccdc9Q8VC31 Mir30a-201ENSMUST00000083471 71 ntBASIC1□□□□□ -2.25
Ccdc9Q8VC31 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Ccdc9Q8VC31 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Ccdc9Q8VC31 Snord69-201ENSMUST00000104024 80 ntBASIC0.99□□□□□ -2.25
Ccdc9Q8VC31 Gm24725-201ENSMUST00000158229 125 ntBASIC0.99□□□□□ -2.25
Ccdc9Q8VC31 Mir7673-201ENSMUST00000184567 64 ntBASIC0.99□□□□□ -2.25
Ccdc9Q8VC31 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.99□□□□□ -2.25
Ccdc9Q8VC31 Mir487b-201ENSMUST00000102265 82 ntBASIC0.98□□□□□ -2.25
Ccdc9Q8VC31 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Ccdc9Q8VC31 Gm23012-201ENSMUST00000104149 83 ntBASIC0.98□□□□□ -2.25
Ccdc9Q8VC31 Gm23672-201ENSMUST00000157471 107 ntBASIC0.98□□□□□ -2.25
Ccdc9Q8VC31 Gm22087-201ENSMUST00000158339 88 ntBASIC0.98□□□□□ -2.25
Ccdc9Q8VC31 AC160976.1-201ENSMUST00000215092 148 ntBASIC0.98□□□□□ -2.25
Ccdc9Q8VC31 Gm25506-201ENSMUST00000104339 70 ntBASIC0.97□□□□□ -2.25
Ccdc9Q8VC31 Gm26274-201ENSMUST00000157103 321 ntBASIC0.97□□□□□ -2.25
Ccdc9Q8VC31 Gm25968-201ENSMUST00000157167 100 ntBASIC0.97□□□□□ -2.25
Ccdc9Q8VC31 Gm24500-201ENSMUST00000158447 124 ntBASIC0.97□□□□□ -2.25
Ccdc9Q8VC31 Gm27977-201ENSMUST00000185159 111 ntBASIC0.97□□□□□ -2.25
Ccdc9Q8VC31 Snord95-201ENSMUST00000082846 68 ntBASIC0.97□□□□□ -2.25
Ccdc9Q8VC31 Gm24271-201ENSMUST00000102327 111 ntBASIC0.96□□□□□ -2.26
Ccdc9Q8VC31 Gm25166-201ENSMUST00000158909 111 ntBASIC0.96□□□□□ -2.26
Ccdc9Q8VC31 Gm42533-201ENSMUST00000196247 157 ntBASIC0.96□□□□□ -2.26
Ccdc9Q8VC31 Mir669h-201ENSMUST00000116944 125 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Gm6272-201ENSMUST00000121256 171 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Gm25641-201ENSMUST00000175135 108 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Mir1949-202ENSMUST00000199259 70 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Gm26438-201ENSMUST00000082593 107 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Gm24612-201ENSMUST00000083267 107 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Mir500-201ENSMUST00000093600 92 ntBASIC0.95□□□□□ -2.26
Ccdc9Q8VC31 Gm26338-201ENSMUST00000102372 110 ntBASIC0.94□□□□□ -2.26
Ccdc9Q8VC31 Gm13065-201ENSMUST00000119178 141 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms