Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm23261-201ENSMUST00000158316 136 ntBASIC0.14□□□□□ -2.39
Atg4aQ8C9S8 Gm22140-201ENSMUST00000158745 120 ntBASIC0.14□□□□□ -2.39
Atg4aQ8C9S8 Gm25247-201ENSMUST00000175475 90 ntBASIC0.14□□□□□ -2.39
Atg4aQ8C9S8 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.14□□□□□ -2.39
Atg4aQ8C9S8 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.14□□□□□ -2.39
Atg4aQ8C9S8 Gm24445-201ENSMUST00000083981 107 ntBASIC0.14□□□□□ -2.39
Atg4aQ8C9S8 Gm24410-201ENSMUST00000083433 107 ntBASIC0.13□□□□□ -2.39
Atg4aQ8C9S8 Gm23500-201ENSMUST00000157735 98 ntBASIC0.12□□□□□ -2.39
Atg4aQ8C9S8 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.12□□□□□ -2.39
Atg4aQ8C9S8 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Atg4aQ8C9S8 Gm23788-201ENSMUST00000122535 106 ntBASIC0.11□□□□□ -2.39
Atg4aQ8C9S8 Gm24288-201ENSMUST00000157630 144 ntBASIC0.11□□□□□ -2.39
Atg4aQ8C9S8 Gm22542-201ENSMUST00000158166 95 ntBASIC0.11□□□□□ -2.39
Atg4aQ8C9S8 Gm27686-201ENSMUST00000185123 91 ntBASIC0.11□□□□□ -2.39
Atg4aQ8C9S8 Gm26253-201ENSMUST00000122493 103 ntBASIC0.1□□□□□ -2.39
Atg4aQ8C9S8 Gm25307-201ENSMUST00000158885 106 ntBASIC0.1□□□□□ -2.39
Atg4aQ8C9S8 Mir669h-201ENSMUST00000116944 125 ntBASIC0.09□□□□□ -2.4
Atg4aQ8C9S8 Gm24482-201ENSMUST00000117005 93 ntBASIC0.09□□□□□ -2.4
Atg4aQ8C9S8 Gm22720-201ENSMUST00000122710 87 ntBASIC0.09□□□□□ -2.4
Atg4aQ8C9S8 Gm25993-201ENSMUST00000175391 80 ntBASIC0.09□□□□□ -2.4
Atg4aQ8C9S8 Gm44328-201ENSMUST00000199331 75 ntBASIC0.09□□□□□ -2.4
Atg4aQ8C9S8 Gm45617-201ENSMUST00000211132 209 ntBASIC0.09□□□□□ -2.4
Atg4aQ8C9S8 Gm24384-201ENSMUST00000122693 75 ntBASIC0.08□□□□□ -2.4
Atg4aQ8C9S8 Gm27607-201ENSMUST00000185162 122 ntBASIC0.08□□□□□ -2.4
Atg4aQ8C9S8 Mir6896-201ENSMUST00000198033 73 ntBASIC0.08□□□□□ -2.4
Atg4aQ8C9S8 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.08□□□□□ -2.4
Atg4aQ8C9S8 Gm25791-201ENSMUST00000083292 137 ntBASIC0.08□□□□□ -2.4
Atg4aQ8C9S8 Gm25309-201ENSMUST00000116728 126 ntBASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm14533-201ENSMUST00000117088 93 ntBASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm25622-201ENSMUST00000157217 104 ntBASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm22088-201ENSMUST00000158341 117 ntBASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm23761-201ENSMUST00000158347 104 ntBASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm23244-201ENSMUST00000083375 92 ntBASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.07□□□□□ -2.4
Atg4aQ8C9S8 Gm23528-201ENSMUST00000104571 132 ntBASIC0.06□□□□□ -2.4
Atg4aQ8C9S8 Gm25328-201ENSMUST00000175013 107 ntBASIC0.06□□□□□ -2.4
Atg4aQ8C9S8 Gm25449-201ENSMUST00000179389 79 ntBASIC0.06□□□□□ -2.4
Atg4aQ8C9S8 Gm20108-201ENSMUST00000219977 153 ntBASIC0.06□□□□□ -2.4
Atg4aQ8C9S8 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.06□□□□□ -2.4
Atg4aQ8C9S8 Gm23994-201ENSMUST00000158059 88 ntBASIC0.05□□□□□ -2.4
Atg4aQ8C9S8 Gm22732-201ENSMUST00000158093 121 ntBASIC0.05□□□□□ -2.4
Atg4aQ8C9S8 Gm23180-201ENSMUST00000158686 125 ntBASIC0.05□□□□□ -2.4
Atg4aQ8C9S8 Gm26466-201ENSMUST00000179615 79 ntBASIC0.05□□□□□ -2.4
Atg4aQ8C9S8 Gm23790-201ENSMUST00000083013 107 ntBASIC0.05□□□□□ -2.4
Atg4aQ8C9S8 Gm22368-201ENSMUST00000102416 109 ntBASIC0.04□□□□□ -2.4
Atg4aQ8C9S8 Mir669f-201ENSMUST00000103850 121 ntBASIC0.04□□□□□ -2.4
Atg4aQ8C9S8 Gm24580-201ENSMUST00000103965 131 ntBASIC0.04□□□□□ -2.4
Atg4aQ8C9S8 Gm24796-201ENSMUST00000104007 107 ntBASIC0.04□□□□□ -2.4
Atg4aQ8C9S8 Mir3089-201ENSMUST00000175350 84 ntBASIC0.04□□□□□ -2.4
Atg4aQ8C9S8 Snord67-201ENSMUST00000104033 111 ntBASIC0.03□□□□□ -2.4
Atg4aQ8C9S8 Mir3083-201ENSMUST00000175377 64 ntBASIC0.03□□□□□ -2.4
Atg4aQ8C9S8 Gm42677-201ENSMUST00000196363 127 ntBASIC0.03□□□□□ -2.4
Atg4aQ8C9S8 Mir5117-201ENSMUST00000083226 84 ntBASIC0.03□□□□□ -2.4
Atg4aQ8C9S8 Gm26425-201ENSMUST00000122529 82 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm23036-201ENSMUST00000157885 99 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 Snord85-201ENSMUST00000083262 73 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 Mir382-201ENSMUST00000083494 76 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 Snora2b-201ENSMUST00000084005 137 ntBASIC0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm22205-201ENSMUST00000122655 71 ntBASIC0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm23278-201ENSMUST00000157911 143 ntBASIC0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm37750-201ENSMUST00000193563 129 ntBASIC0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm25229-201ENSMUST00000178587 79 ntBASIC0□□□□□ -2.41
Atg4aQ8C9S8 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.01□□□□□ -2.41
Atg4aQ8C9S8 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.02□□□□□ -2.41
Atg4aQ8C9S8 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.03□□□□□ -2.41
Atg4aQ8C9S8 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.03□□□□□ -2.41
Atg4aQ8C9S8 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.03□□□□□ -2.41
Atg4aQ8C9S8 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.03□□□□□ -2.41
Atg4aQ8C9S8 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.04□□□□□ -2.42
Atg4aQ8C9S8 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.04□□□□□ -2.42
Atg4aQ8C9S8 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.04□□□□□ -2.42
Atg4aQ8C9S8 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.04□□□□□ -2.42
Atg4aQ8C9S8 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.05□□□□□ -2.42
Atg4aQ8C9S8 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.05□□□□□ -2.42
Atg4aQ8C9S8 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.05□□□□□ -2.42
Atg4aQ8C9S8 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.06□□□□□ -2.42
Atg4aQ8C9S8 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.06□□□□□ -2.42
Atg4aQ8C9S8 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.06□□□□□ -2.42
Atg4aQ8C9S8 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.06□□□□□ -2.42
Atg4aQ8C9S8 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.06□□□□□ -2.42
Atg4aQ8C9S8 Mir327-201ENSMUST00000199328 69 ntBASIC-0.06□□□□□ -2.42
Atg4aQ8C9S8 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.07□□□□□ -2.42
Atg4aQ8C9S8 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.08□□□□□ -2.42
Atg4aQ8C9S8 Mir672-201ENSMUST00000102331 100 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 736 ms