Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir7665-201ENSMUST00000184907 63 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Mir3071-201ENSMUST00000093621 80 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.72□□□□□ -2.13
Trim47Q8C0E3 Gm24723-201ENSMUST00000158233 132 ntBASIC1.72□□□□□ -2.13
Trim47Q8C0E3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Gm24288-201ENSMUST00000157630 144 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Mir3968-201ENSMUST00000175355 100 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Gm27894-201ENSMUST00000184177 92 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm25656-201ENSMUST00000158466 66 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm27420-201ENSMUST00000183823 79 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm44490-201ENSMUST00000198566 127 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm25802-201ENSMUST00000082639 77 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm22673-201ENSMUST00000104415 131 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Gm6272-201ENSMUST00000121256 171 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Gm24508-201ENSMUST00000180104 107 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim47Q8C0E3 Gm24233-201ENSMUST00000104317 122 ntBASIC1.68□□□□□ -2.14
Trim47Q8C0E3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.68□□□□□ -2.14
Trim47Q8C0E3 Gm26259-201ENSMUST00000104778 97 ntBASIC1.67□□□□□ -2.14
Trim47Q8C0E3 Gm23036-201ENSMUST00000157885 99 ntBASIC1.67□□□□□ -2.14
Trim47Q8C0E3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm25087-201ENSMUST00000101992 78 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm25274-201ENSMUST00000104296 135 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm25968-201ENSMUST00000157167 100 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm26007-201ENSMUST00000158798 120 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Mir500-201ENSMUST00000093600 92 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm26467-201ENSMUST00000097257 78 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm23961-201ENSMUST00000104685 97 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm25309-201ENSMUST00000116728 126 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm25055-201ENSMUST00000157369 76 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm24218-201ENSMUST00000180163 105 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm12432-201ENSMUST00000119540 186 ntBASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Gm24531-201ENSMUST00000157945 100 ntBASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Gm38323-201ENSMUST00000192450 210 ntBASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trim47Q8C0E3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.62□□□□□ -2.15
Trim47Q8C0E3 Gm22016-201ENSMUST00000158793 114 ntBASIC1.62□□□□□ -2.15
Trim47Q8C0E3 Gm45125-201ENSMUST00000206908 151 ntBASIC1.62□□□□□ -2.15
Trim47Q8C0E3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm25715-201ENSMUST00000158627 125 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm24710-201ENSMUST00000175235 101 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm24135-201ENSMUST00000179085 101 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Mir6962-201ENSMUST00000199512 63 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm23989-201ENSMUST00000117030 66 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 Gm22165-201ENSMUST00000158414 103 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 Gm25170-201ENSMUST00000104191 129 ntBASIC1.59□□□□□ -2.15
Trim47Q8C0E3 Gm23180-201ENSMUST00000158686 125 ntBASIC1.59□□□□□ -2.15
Trim47Q8C0E3 Gm24271-201ENSMUST00000102327 111 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Gm22520-201ENSMUST00000158269 129 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Gm24500-201ENSMUST00000158447 124 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Mir3079-201ENSMUST00000175428 90 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Mir7052-201ENSMUST00000184821 65 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Mir717-201ENSMUST00000102259 109 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm24377-201ENSMUST00000104398 131 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm23853-201ENSMUST00000158375 104 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm38274-201ENSMUST00000195689 148 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm26338-201ENSMUST00000102372 110 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Traj60-201ENSMUST00000167781 54 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm23410-201ENSMUST00000179967 107 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm27980-201ENSMUST00000184094 169 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Mir7059-201ENSMUST00000184825 59 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm22505-201ENSMUST00000082956 108 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm22363-201ENSMUST00000083100 108 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm23814-201ENSMUST00000083230 102 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.55□□□□□ -2.16
Trim47Q8C0E3 Gm22746-201ENSMUST00000082494 107 ntBASIC1.55□□□□□ -2.16
Trim47Q8C0E3 Gm25326-201ENSMUST00000101903 107 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm26301-201ENSMUST00000104813 95 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm23416-201ENSMUST00000175520 95 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Mir448-201ENSMUST00000083516 112 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm24942-201ENSMUST00000158328 114 ntBASIC1.53□□□□□ -2.16
Trim47Q8C0E3 Mir343-201ENSMUST00000102360 75 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Gm22720-201ENSMUST00000122710 87 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Gm25993-201ENSMUST00000175391 80 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Snord57-201ENSMUST00000083338 72 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm23955-201ENSMUST00000157214 100 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm23329-201ENSMUST00000157415 108 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm24808-201ENSMUST00000157993 118 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms