Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm24920-201ENSMUST00000083018 85 ntBASIC2.26□□□□□ -2.05
Trim35Q8C006 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.25□□□□□ -2.05
Trim35Q8C006 Mir7009-201ENSMUST00000184519 64 ntBASIC2.25□□□□□ -2.05
Trim35Q8C006 Mir378a-201ENSMUST00000198300 66 ntBASIC2.25□□□□□ -2.05
Trim35Q8C006 Gm26015-201ENSMUST00000104402 125 ntBASIC2.23□□□□□ -2.05
Trim35Q8C006 Gm23853-201ENSMUST00000158375 104 ntBASIC2.23□□□□□ -2.05
Trim35Q8C006 Mir3069-201ENSMUST00000198802 65 ntBASIC2.23□□□□□ -2.05
Trim35Q8C006 Mir30d-201ENSMUST00000083503 82 ntBASIC2.23□□□□□ -2.05
Trim35Q8C006 Gm24271-201ENSMUST00000102327 111 ntBASIC2.22□□□□□ -2.05
Trim35Q8C006 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.22□□□□□ -2.05
Trim35Q8C006 Gm22074-201ENSMUST00000158595 113 ntBASIC2.22□□□□□ -2.05
Trim35Q8C006 Gm37778-201ENSMUST00000191732 190 ntBASIC2.22□□□□□ -2.05
Trim35Q8C006 Gm44384-201ENSMUST00000200208 114 ntBASIC2.22□□□□□ -2.05
Trim35Q8C006 Gm24661-201ENSMUST00000083205 104 ntBASIC2.22□□□□□ -2.05
Trim35Q8C006 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim35Q8C006 Mir297b-201ENSMUST00000102268 109 ntBASIC2.21□□□□□ -2.06
Trim35Q8C006 Mir7010-201ENSMUST00000183464 63 ntBASIC2.21□□□□□ -2.06
Trim35Q8C006 Gm27399-201ENSMUST00000184250 78 ntBASIC2.21□□□□□ -2.06
Trim35Q8C006 Gm22455-201ENSMUST00000082580 71 ntBASIC2.21□□□□□ -2.06
Trim35Q8C006 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trim35Q8C006 Gm25642-201ENSMUST00000175137 66 ntBASIC2.2□□□□□ -2.06
Trim35Q8C006 Gm44477-201ENSMUST00000199661 110 ntBASIC2.2□□□□□ -2.06
Trim35Q8C006 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Trim35Q8C006 Gm25094-201ENSMUST00000103992 131 ntBASIC2.19□□□□□ -2.06
Trim35Q8C006 Gm25903-201ENSMUST00000158492 103 ntBASIC2.19□□□□□ -2.06
Trim35Q8C006 Gm27959-201ENSMUST00000185172 111 ntBASIC2.19□□□□□ -2.06
Trim35Q8C006 Gm44327-201ENSMUST00000200068 117 ntBASIC2.19□□□□□ -2.06
Trim35Q8C006 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trim35Q8C006 Gm37557-201ENSMUST00000191640 139 ntBASIC2.18□□□□□ -2.06
Trim35Q8C006 Mir344e-201ENSMUST00000104677 66 ntBASIC2.17□□□□□ -2.06
Trim35Q8C006 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trim35Q8C006 Gm24321-201ENSMUST00000175348 80 ntBASIC2.16□□□□□ -2.06
Trim35Q8C006 AC154832.1-201ENSMUST00000228928 141 ntBASIC2.16□□□□□ -2.06
Trim35Q8C006 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trim35Q8C006 Gm25068-201ENSMUST00000103895 110 ntBASIC2.15□□□□□ -2.07
Trim35Q8C006 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim35Q8C006 Gm25820-201ENSMUST00000198589 127 ntBASIC2.15□□□□□ -2.07
Trim35Q8C006 Mir7217-201ENSMUST00000200304 62 ntBASIC2.15□□□□□ -2.07
Trim35Q8C006 Mir497-201ENSMUST00000200557 84 ntBASIC2.15□□□□□ -2.07
Trim35Q8C006 Snord96a-201ENSMUST00000082791 81 ntBASIC2.15□□□□□ -2.07
Trim35Q8C006 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim35Q8C006 Gm22149-201ENSMUST00000104442 136 ntBASIC2.14□□□□□ -2.07
Trim35Q8C006 Gm22551-201ENSMUST00000157795 103 ntBASIC2.14□□□□□ -2.07
Trim35Q8C006 Gm23416-201ENSMUST00000175520 95 ntBASIC2.14□□□□□ -2.07
Trim35Q8C006 Gm23240-201ENSMUST00000083009 121 ntBASIC2.14□□□□□ -2.07
Trim35Q8C006 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trim35Q8C006 Mir3079-201ENSMUST00000175428 90 ntBASIC2.13□□□□□ -2.07
Trim35Q8C006 Gm27798-201ENSMUST00000184989 71 ntBASIC2.13□□□□□ -2.07
Trim35Q8C006 Gm44303-201ENSMUST00000196348 83 ntBASIC2.12□□□□□ -2.07
Trim35Q8C006 Gm25894-201ENSMUST00000083458 75 ntBASIC2.12□□□□□ -2.07
Trim35Q8C006 Gm26224-201ENSMUST00000082506 80 ntBASIC2.11□□□□□ -2.07
Trim35Q8C006 Gm15536-201ENSMUST00000121411 114 ntBASIC2.1□□□□□ -2.07
Trim35Q8C006 Gm22093-201ENSMUST00000158980 111 ntBASIC2.1□□□□□ -2.07
Trim35Q8C006 Gm27443-201ENSMUST00000184660 98 ntBASIC2.1□□□□□ -2.07
Trim35Q8C006 Mir295-201ENSMUST00000104694 69 ntBASIC2.09□□□□□ -2.07
Trim35Q8C006 Mir3473d-201ENSMUST00000175346 81 ntBASIC2.09□□□□□ -2.07
Trim35Q8C006 Mir92-2-201ENSMUST00000083679 91 ntBASIC2.09□□□□□ -2.07
Trim35Q8C006 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Trim35Q8C006 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trim35Q8C006 Gm25158-201ENSMUST00000177681 121 ntBASIC2.08□□□□□ -2.08
Trim35Q8C006 Gm24097-201ENSMUST00000178720 107 ntBASIC2.08□□□□□ -2.08
Trim35Q8C006 Gm26229-201ENSMUST00000179699 121 ntBASIC2.08□□□□□ -2.08
Trim35Q8C006 Gm24098-201ENSMUST00000102075 109 ntBASIC2.07□□□□□ -2.08
Trim35Q8C006 Gm25381-201ENSMUST00000102078 109 ntBASIC2.07□□□□□ -2.08
Trim35Q8C006 Snord67-201ENSMUST00000104033 111 ntBASIC2.07□□□□□ -2.08
Trim35Q8C006 Gm45617-201ENSMUST00000211132 209 ntBASIC2.07□□□□□ -2.08
Trim35Q8C006 Mir142b-201ENSMUST00000083486 115 ntBASIC2.07□□□□□ -2.08
Trim35Q8C006 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Trim35Q8C006 U6.1-201ENSMUST00000157443 101 ntBASIC2.06□□□□□ -2.08
Trim35Q8C006 Gm27943-201ENSMUST00000184844 116 ntBASIC2.06□□□□□ -2.08
Trim35Q8C006 Mir7226-201ENSMUST00000184953 60 ntBASIC2.06□□□□□ -2.08
Trim35Q8C006 Gm23766-201ENSMUST00000103894 80 ntBASIC2.05□□□□□ -2.08
Trim35Q8C006 Gm23469-201ENSMUST00000157131 104 ntBASIC2.05□□□□□ -2.08
Trim35Q8C006 Gm37646-201ENSMUST00000191756 111 ntBASIC2.05□□□□□ -2.08
Trim35Q8C006 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC2.05□□□□□ -2.08
Trim35Q8C006 Gm23245-201ENSMUST00000083370 135 ntBASIC2.05□□□□□ -2.08
Trim35Q8C006 n-R5s6-201ENSMUST00000122663 88 ntBASIC2.04□□□□□ -2.08
Trim35Q8C006 Mir3569-201ENSMUST00000185080 58 ntBASIC2.04□□□□□ -2.08
Trim35Q8C006 Mir3070a-201ENSMUST00000175468 89 ntBASIC2.03□□□□□ -2.08
Trim35Q8C006 Mir322-201ENSMUST00000083484 95 ntBASIC2.03□□□□□ -2.08
Trim35Q8C006 Mir8116-201ENSMUST00000184134 97 ntBASIC2.02□□□□□ -2.09
Trim35Q8C006 Gm24044-201ENSMUST00000083107 156 ntBASIC2.02□□□□□ -2.09
Trim35Q8C006 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim35Q8C006 Gm22603-201ENSMUST00000157603 96 ntBASIC2.01□□□□□ -2.09
Trim35Q8C006 Gm24808-201ENSMUST00000157993 118 ntBASIC2.01□□□□□ -2.09
Trim35Q8C006 Gm23813-201ENSMUST00000175153 77 ntBASIC2.01□□□□□ -2.09
Trim35Q8C006 Gm22264-201ENSMUST00000178200 107 ntBASIC2.01□□□□□ -2.09
Trim35Q8C006 Gm25138-201ENSMUST00000083248 136 ntBASIC2.01□□□□□ -2.09
Trim35Q8C006 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim35Q8C006 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Trim35Q8C006 Gm25460-201ENSMUST00000157954 127 ntBASIC2□□□□□ -2.09
Trim35Q8C006 Mir6901-201ENSMUST00000185062 62 ntBASIC2□□□□□ -2.09
Trim35Q8C006 Mir222-201ENSMUST00000083537 79 ntBASIC2□□□□□ -2.09
Trim35Q8C006 Gm22494-201ENSMUST00000104495 128 ntBASIC1.99□□□□□ -2.09
Trim35Q8C006 Gm24177-201ENSMUST00000158927 131 ntBASIC1.98□□□□□ -2.09
Trim35Q8C006 Mir7016-201ENSMUST00000184308 72 ntBASIC1.98□□□□□ -2.09
Trim35Q8C006 Snord58b-201ENSMUST00000082937 66 ntBASIC1.98□□□□□ -2.09
Trim35Q8C006 Gm25431-201ENSMUST00000101978 107 ntBASIC1.97□□□□□ -2.09
Trim35Q8C006 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.97□□□□□ -2.09
Trim35Q8C006 Mir1948-201ENSMUST00000157325 85 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 208.8 ms