Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Rnf220Q6PDX6 Gm24833-201ENSMUST00000116775 120 ntBASIC0.3□□□□□ -2.36
Rnf220Q6PDX6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Rnf220Q6PDX6 Gm26007-201ENSMUST00000158798 120 ntBASIC0.3□□□□□ -2.36
Rnf220Q6PDX6 Mir3108-201ENSMUST00000175500 79 ntBASIC0.3□□□□□ -2.36
Rnf220Q6PDX6 Gm24555-201ENSMUST00000104548 124 ntBASIC0.29□□□□□ -2.36
Rnf220Q6PDX6 Gm23528-201ENSMUST00000104571 132 ntBASIC0.29□□□□□ -2.36
Rnf220Q6PDX6 Gm22845-201ENSMUST00000157712 104 ntBASIC0.29□□□□□ -2.36
Rnf220Q6PDX6 Gm25633-201ENSMUST00000178565 107 ntBASIC0.29□□□□□ -2.36
Rnf220Q6PDX6 Gm22542-201ENSMUST00000158166 95 ntBASIC0.28□□□□□ -2.36
Rnf220Q6PDX6 Gm23020-201ENSMUST00000158766 253 ntBASIC0.28□□□□□ -2.36
Rnf220Q6PDX6 Gm23369-201ENSMUST00000175406 105 ntBASIC0.28□□□□□ -2.36
Rnf220Q6PDX6 Gm27639-201ENSMUST00000184937 85 ntBASIC0.28□□□□□ -2.36
Rnf220Q6PDX6 Mir3065-201ENSMUST00000198674 87 ntBASIC0.28□□□□□ -2.36
Rnf220Q6PDX6 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.28□□□□□ -2.36
Rnf220Q6PDX6 Gm25229-201ENSMUST00000178587 79 ntBASIC0.27□□□□□ -2.37
Rnf220Q6PDX6 Gm44828-201ENSMUST00000203745 106 ntBASIC0.27□□□□□ -2.37
Rnf220Q6PDX6 AC122327.1-201ENSMUST00000220778 108 ntBASIC0.27□□□□□ -2.37
Rnf220Q6PDX6 Mir5117-201ENSMUST00000083226 84 ntBASIC0.27□□□□□ -2.37
Rnf220Q6PDX6 Gm22677-201ENSMUST00000116977 108 ntBASIC0.26□□□□□ -2.37
Rnf220Q6PDX6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.26□□□□□ -2.37
Rnf220Q6PDX6 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Rnf220Q6PDX6 Gm22205-201ENSMUST00000122655 71 ntBASIC0.25□□□□□ -2.37
Rnf220Q6PDX6 Gm23821-201ENSMUST00000158738 106 ntBASIC0.25□□□□□ -2.37
Rnf220Q6PDX6 Gm25328-201ENSMUST00000175013 107 ntBASIC0.25□□□□□ -2.37
Rnf220Q6PDX6 Gm25993-201ENSMUST00000175391 80 ntBASIC0.25□□□□□ -2.37
Rnf220Q6PDX6 Gm14533-201ENSMUST00000117088 93 ntBASIC0.24□□□□□ -2.37
Rnf220Q6PDX6 Gm24650-201ENSMUST00000157105 103 ntBASIC0.24□□□□□ -2.37
Rnf220Q6PDX6 Gm25307-201ENSMUST00000158885 106 ntBASIC0.24□□□□□ -2.37
Rnf220Q6PDX6 Mir6365-201ENSMUST00000183990 101 ntBASIC0.24□□□□□ -2.37
Rnf220Q6PDX6 Mir8107-201ENSMUST00000184024 117 ntBASIC0.24□□□□□ -2.37
Rnf220Q6PDX6 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.24□□□□□ -2.37
Rnf220Q6PDX6 Gm25161-201ENSMUST00000158913 132 ntBASIC0.23□□□□□ -2.37
Rnf220Q6PDX6 Gm42677-201ENSMUST00000196363 127 ntBASIC0.23□□□□□ -2.37
Rnf220Q6PDX6 Gm25696-201ENSMUST00000082900 105 ntBASIC0.23□□□□□ -2.37
Rnf220Q6PDX6 Gm25247-201ENSMUST00000175475 90 ntBASIC0.22□□□□□ -2.37
Rnf220Q6PDX6 Gm23788-201ENSMUST00000122535 106 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Gm24183-201ENSMUST00000122572 93 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Gm22605-201ENSMUST00000158289 108 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Gm24637-201ENSMUST00000158674 85 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Gm43038-201ENSMUST00000202359 88 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Mir224-201ENSMUST00000083608 82 ntBASIC0.21□□□□□ -2.38
Rnf220Q6PDX6 Gm24580-201ENSMUST00000103965 131 ntBASIC0.2□□□□□ -2.38
Rnf220Q6PDX6 Gm24288-201ENSMUST00000157630 144 ntBASIC0.2□□□□□ -2.38
Rnf220Q6PDX6 Gm22340-201ENSMUST00000157717 114 ntBASIC0.2□□□□□ -2.38
Rnf220Q6PDX6 Mir7077-201ENSMUST00000183991 57 ntBASIC0.2□□□□□ -2.38
Rnf220Q6PDX6 Gm29432-201ENSMUST00000185397 139 ntBASIC0.2□□□□□ -2.38
Rnf220Q6PDX6 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.2□□□□□ -2.38
Rnf220Q6PDX6 Gm25991-201ENSMUST00000102439 99 ntBASIC0.19□□□□□ -2.38
Rnf220Q6PDX6 Gm26441-201ENSMUST00000082590 104 ntBASIC0.19□□□□□ -2.38
Rnf220Q6PDX6 Mir710-201ENSMUST00000102088 110 ntBASIC0.18□□□□□ -2.38
Rnf220Q6PDX6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.18□□□□□ -2.38
Rnf220Q6PDX6 Gm25870-201ENSMUST00000179845 79 ntBASIC0.18□□□□□ -2.38
Rnf220Q6PDX6 Mir6896-201ENSMUST00000198033 73 ntBASIC0.18□□□□□ -2.38
Rnf220Q6PDX6 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.18□□□□□ -2.38
Rnf220Q6PDX6 Mir1197-201ENSMUST00000117037 120 ntBASIC0.17□□□□□ -2.38
Rnf220Q6PDX6 Gm22720-201ENSMUST00000122710 87 ntBASIC0.17□□□□□ -2.38
Rnf220Q6PDX6 Gm24445-201ENSMUST00000083981 107 ntBASIC0.16□□□□□ -2.38
Rnf220Q6PDX6 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.16□□□□□ -2.38
Rnf220Q6PDX6 Gm45617-201ENSMUST00000211132 209 ntBASIC0.15□□□□□ -2.39
Rnf220Q6PDX6 Gm25296-201ENSMUST00000082566 67 ntBASIC0.15□□□□□ -2.39
Rnf220Q6PDX6 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.14□□□□□ -2.39
Rnf220Q6PDX6 Mir363-201ENSMUST00000093598 75 ntBASIC0.14□□□□□ -2.39
Rnf220Q6PDX6 Gm27975-201ENSMUST00000184400 101 ntBASIC0.13□□□□□ -2.39
Rnf220Q6PDX6 Gm44328-201ENSMUST00000199331 75 ntBASIC0.13□□□□□ -2.39
Rnf220Q6PDX6 Gm26207-201ENSMUST00000082909 104 ntBASIC0.13□□□□□ -2.39
Rnf220Q6PDX6 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.13□□□□□ -2.39
Rnf220Q6PDX6 Gm22729-201ENSMUST00000158088 129 ntBASIC0.12□□□□□ -2.39
Rnf220Q6PDX6 Gm25375-201ENSMUST00000158157 135 ntBASIC0.12□□□□□ -2.39
Rnf220Q6PDX6 Gm22354-201ENSMUST00000083919 70 ntBASIC0.12□□□□□ -2.39
Rnf220Q6PDX6 Snord67-201ENSMUST00000104033 111 ntBASIC0.11□□□□□ -2.39
Rnf220Q6PDX6 Gm23531-201ENSMUST00000104567 68 ntBASIC0.1□□□□□ -2.39
Rnf220Q6PDX6 Gm23994-201ENSMUST00000158059 88 ntBASIC0.1□□□□□ -2.39
Rnf220Q6PDX6 Gm22429-201ENSMUST00000158553 130 ntBASIC0.1□□□□□ -2.39
Rnf220Q6PDX6 Gm25791-201ENSMUST00000083292 137 ntBASIC0.1□□□□□ -2.39
Rnf220Q6PDX6 Gm24796-201ENSMUST00000104007 107 ntBASIC0.09□□□□□ -2.4
Rnf220Q6PDX6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.4
Rnf220Q6PDX6 Gm23180-201ENSMUST00000158686 125 ntBASIC0.09□□□□□ -2.4
Rnf220Q6PDX6 Gm37750-201ENSMUST00000193563 129 ntBASIC0.09□□□□□ -2.4
Rnf220Q6PDX6 Gm22251-201ENSMUST00000083216 107 ntBASIC0.08□□□□□ -2.4
Rnf220Q6PDX6 Gm27607-201ENSMUST00000185162 122 ntBASIC0.07□□□□□ -2.4
Rnf220Q6PDX6 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.07□□□□□ -2.4
Rnf220Q6PDX6 Gm22368-201ENSMUST00000102416 109 ntBASIC0.06□□□□□ -2.4
Rnf220Q6PDX6 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Rnf220Q6PDX6 Gm25322-201ENSMUST00000122556 104 ntBASIC0.06□□□□□ -2.4
Rnf220Q6PDX6 Gm22088-201ENSMUST00000158341 117 ntBASIC0.05□□□□□ -2.4
Rnf220Q6PDX6 Gm22838-201ENSMUST00000158437 99 ntBASIC0.05□□□□□ -2.4
Rnf220Q6PDX6 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.05□□□□□ -2.4
Rnf220Q6PDX6 Gm24162-201ENSMUST00000093665 102 ntBASIC0.05□□□□□ -2.4
Rnf220Q6PDX6 Gm23468-201ENSMUST00000157125 108 ntBASIC0.04□□□□□ -2.4
Rnf220Q6PDX6 Mir3089-201ENSMUST00000175350 84 ntBASIC0.04□□□□□ -2.4
Rnf220Q6PDX6 Snord85-201ENSMUST00000083262 73 ntBASIC0.04□□□□□ -2.4
Rnf220Q6PDX6 Gm25619-201ENSMUST00000122621 104 ntBASIC0.03□□□□□ -2.4
Rnf220Q6PDX6 Gm23278-201ENSMUST00000157911 143 ntBASIC0.03□□□□□ -2.4
Rnf220Q6PDX6 Gm26359-201ENSMUST00000158873 101 ntBASIC0.03□□□□□ -2.4
Rnf220Q6PDX6 Mir3967-201ENSMUST00000198710 68 ntBASIC0.03□□□□□ -2.4
Rnf220Q6PDX6 Gm22455-201ENSMUST00000082580 71 ntBASIC0.03□□□□□ -2.4
Rnf220Q6PDX6 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Rnf220Q6PDX6 Mir669f-201ENSMUST00000103850 121 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 212.8 ms