Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm24070-201ENSMUST00000104519 130 ntBASIC-2.44□□□□□ -2.8
Trav5d-4Q5R1F6 Gm22196-201ENSMUST00000116865 109 ntBASIC-2.45□□□□□ -2.8
Trav5d-4Q5R1F6 mt-Tr-201ENSMUST00000082412 68 ntBASIC-2.45□□□□□ -2.8
Trav5d-4Q5R1F6 Gm22459-201ENSMUST00000082577 108 ntBASIC-2.45□□□□□ -2.8
Trav5d-4Q5R1F6 Mir702-201ENSMUST00000102285 109 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm25887-201ENSMUST00000157777 84 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm22989-201ENSMUST00000158313 86 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm26426-201ENSMUST00000177866 123 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm26060-201ENSMUST00000180094 123 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm27415-201ENSMUST00000183720 95 ntBASIC-2.46□□□□□ -2.8
Trav5d-4Q5R1F6 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-2.47□□□□□ -2.8
Trav5d-4Q5R1F6 Gm27549-201ENSMUST00000183508 62 ntBASIC-2.47□□□□□ -2.8
Trav5d-4Q5R1F6 Gm22430-201ENSMUST00000158546 107 ntBASIC-2.48□□□□□ -2.81
Trav5d-4Q5R1F6 Gm25915-201ENSMUST00000104265 126 ntBASIC-2.49□□□□□ -2.81
Trav5d-4Q5R1F6 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.49□□□□□ -2.81
Trav5d-4Q5R1F6 Snord78-201ENSMUST00000104032 66 ntBASIC-2.5□□□□□ -2.81
Trav5d-4Q5R1F6 AC109214.2-201ENSMUST00000220089 358 ntBASIC-2.5□□□□□ -2.81
Trav5d-4Q5R1F6 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Snord123-201ENSMUST00000158692 71 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Gm22699-201ENSMUST00000175376 105 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Gm27937-201ENSMUST00000183605 88 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Mir6237-201ENSMUST00000183808 91 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Gm43977-201ENSMUST00000203970 189 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Gm23507-201ENSMUST00000083078 107 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.51□□□□□ -2.81
Trav5d-4Q5R1F6 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.52□□□□□ -2.81
Trav5d-4Q5R1F6 Gm26104-201ENSMUST00000157250 108 ntBASIC-2.52□□□□□ -2.81
Trav5d-4Q5R1F6 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.53□□□□□ -2.81
Trav5d-4Q5R1F6 Mir1948-201ENSMUST00000157325 85 ntBASIC-2.55□□□□□ -2.82
Trav5d-4Q5R1F6 Gm24947-201ENSMUST00000158334 110 ntBASIC-2.55□□□□□ -2.82
Trav5d-4Q5R1F6 Gm18502-201ENSMUST00000218679 199 ntBASIC-2.55□□□□□ -2.82
Trav5d-4Q5R1F6 Gm23607-201ENSMUST00000104550 126 ntBASIC-2.56□□□□□ -2.82
Trav5d-4Q5R1F6 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
Trav5d-4Q5R1F6 Gm25653-201ENSMUST00000158473 138 ntBASIC-2.57□□□□□ -2.82
Trav5d-4Q5R1F6 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.58□□□□□ -2.82
Trav5d-4Q5R1F6 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.58□□□□□ -2.82
Trav5d-4Q5R1F6 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.58□□□□□ -2.82
Trav5d-4Q5R1F6 Gm25684-201ENSMUST00000083941 107 ntBASIC-2.58□□□□□ -2.82
Trav5d-4Q5R1F6 Mir471-201ENSMUST00000093596 67 ntBASIC-2.59□□□□□ -2.82
Trav5d-4Q5R1F6 Gm24131-201ENSMUST00000158539 107 ntBASIC-2.6□□□□□ -2.83
Trav5d-4Q5R1F6 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-2.6□□□□□ -2.83
Trav5d-4Q5R1F6 Gm43038-201ENSMUST00000202359 88 ntBASIC-2.61□□□□□ -2.83
Trav5d-4Q5R1F6 Mir466e-201ENSMUST00000198862 84 ntBASIC-2.62□□□□□ -2.83
Trav5d-4Q5R1F6 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-2.62□□□□□ -2.83
Trav5d-4Q5R1F6 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.63□□□□□ -2.83
Trav5d-4Q5R1F6 Gm25716-201ENSMUST00000158628 104 ntBASIC-2.63□□□□□ -2.83
Trav5d-4Q5R1F6 Gm23173-201ENSMUST00000157161 160 ntBASIC-2.65□□□□□ -2.83
Trav5d-4Q5R1F6 Gm25623-201ENSMUST00000157216 108 ntBASIC-2.65□□□□□ -2.83
Trav5d-4Q5R1F6 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.65□□□□□ -2.83
Trav5d-4Q5R1F6 Gm37845-201ENSMUST00000194977 355 ntBASIC-2.65□□□□□ -2.83
Trav5d-4Q5R1F6 Mir669b-201ENSMUST00000102172 97 ntBASIC-2.67□□□□□ -2.84
Trav5d-4Q5R1F6 Gm23909-201ENSMUST00000104598 131 ntBASIC-2.67□□□□□ -2.84
Trav5d-4Q5R1F6 Gm24384-201ENSMUST00000122693 75 ntBASIC-2.67□□□□□ -2.84
Trav5d-4Q5R1F6 Gm24842-201ENSMUST00000158681 54 ntBASIC-2.67□□□□□ -2.84
Trav5d-4Q5R1F6 Gm24927-201ENSMUST00000083397 107 ntBASIC-2.67□□□□□ -2.84
Trav5d-4Q5R1F6 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 Gm43324-201ENSMUST00000197482 289 ntBASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 Gm25482-201ENSMUST00000083225 107 ntBASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 Gm24134-201ENSMUST00000083361 71 ntBASIC-2.68□□□□□ -2.84
Trav5d-4Q5R1F6 Gm25978-201ENSMUST00000158698 90 ntBASIC-2.69□□□□□ -2.84
Trav5d-4Q5R1F6 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.69□□□□□ -2.84
Trav5d-4Q5R1F6 Gm22140-201ENSMUST00000158745 120 ntBASIC-2.71□□□□□ -2.84
Trav5d-4Q5R1F6 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.71□□□□□ -2.84
Trav5d-4Q5R1F6 Gm13339-201ENSMUST00000120651 510 ntBASIC-2.72□□□□□ -2.84
Trav5d-4Q5R1F6 Gm24717-201ENSMUST00000157522 124 ntBASIC-2.73□□□□□ -2.85
Trav5d-4Q5R1F6 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.73□□□□□ -2.85
Trav5d-4Q5R1F6 Snord72-201ENSMUST00000104549 81 ntBASIC-2.74□□□□□ -2.85
Trav5d-4Q5R1F6 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.74□□□□□ -2.85
Trav5d-4Q5R1F6 Gm25229-201ENSMUST00000178587 79 ntBASIC-2.74□□□□□ -2.85
Trav5d-4Q5R1F6 AC140930.2-201ENSMUST00000221803 109 ntBASIC-2.74□□□□□ -2.85
Trav5d-4Q5R1F6 Gm23461-201ENSMUST00000083265 107 ntBASIC-2.74□□□□□ -2.85
Trav5d-4Q5R1F6 Gm26051-201ENSMUST00000104642 93 ntBASIC-2.75□□□□□ -2.85
Trav5d-4Q5R1F6 Gm25599-201ENSMUST00000157816 103 ntBASIC-2.75□□□□□ -2.85
Trav5d-4Q5R1F6 Gm25397-201ENSMUST00000176951 92 ntBASIC-2.75□□□□□ -2.85
Trav5d-4Q5R1F6 Gm26109-201ENSMUST00000083970 70 ntBASIC-2.76□□□□□ -2.85
Trav5d-4Q5R1F6 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.77□□□□□ -2.85
Trav5d-4Q5R1F6 AC165138.1-201ENSMUST00000226984 270 ntBASIC-2.77□□□□□ -2.85
Trav5d-4Q5R1F6 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.78□□□□□ -2.85
Trav5d-4Q5R1F6 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.78□□□□□ -2.85
Trav5d-4Q5R1F6 Gm22101-201ENSMUST00000157928 103 ntBASIC-2.78□□□□□ -2.85
Trav5d-4Q5R1F6 Gm25440-201ENSMUST00000158279 154 ntBASIC-2.78□□□□□ -2.85
Trav5d-4Q5R1F6 Gm23209-201ENSMUST00000158667 110 ntBASIC-2.78□□□□□ -2.85
Trav5d-4Q5R1F6 Gm25141-201ENSMUST00000083177 107 ntBASIC-2.78□□□□□ -2.85
Trav5d-4Q5R1F6 Gm23258-201ENSMUST00000158319 106 ntBASIC-2.79□□□□□ -2.86
Trav5d-4Q5R1F6 Gm22951-201ENSMUST00000179471 107 ntBASIC-2.79□□□□□ -2.86
Trav5d-4Q5R1F6 AC151902.2-201ENSMUST00000226419 301 ntBASIC-2.79□□□□□ -2.86
Trav5d-4Q5R1F6 Gm23240-201ENSMUST00000083009 121 ntBASIC-2.79□□□□□ -2.86
Trav5d-4Q5R1F6 Gm45492-201ENSMUST00000211611 288 ntBASIC-2.8□□□□□ -2.86
Trav5d-4Q5R1F6 Gm24201-201ENSMUST00000082946 125 ntBASIC-2.8□□□□□ -2.86
Trav5d-4Q5R1F6 Mir741-201ENSMUST00000103931 71 ntBASIC-2.81□□□□□ -2.86
Trav5d-4Q5R1F6 Gm22681-201ENSMUST00000083853 106 ntBASIC-2.81□□□□□ -2.86
Trav5d-4Q5R1F6 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.82□□□□□ -2.86
Trav5d-4Q5R1F6 Gm24724-201ENSMUST00000158230 107 ntBASIC-2.82□□□□□ -2.86
Trav5d-4Q5R1F6 Gm27845-201ENSMUST00000184479 114 ntBASIC-2.82□□□□□ -2.86
Trav5d-4Q5R1F6 Gm27686-201ENSMUST00000185123 91 ntBASIC-2.82□□□□□ -2.86
Trav5d-4Q5R1F6 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 76,532 protein–RNA pairs in 190.8 ms