Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Rnf43Q5NCP0 Gm25166-201ENSMUST00000158909 111 ntBASIC1.41□□□□□ -2.18
Rnf43Q5NCP0 Gm25641-201ENSMUST00000175135 108 ntBASIC1.41□□□□□ -2.18
Rnf43Q5NCP0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.4□□□□□ -2.19
Rnf43Q5NCP0 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.4□□□□□ -2.19
Rnf43Q5NCP0 Gm25968-201ENSMUST00000157167 100 ntBASIC1.4□□□□□ -2.19
Rnf43Q5NCP0 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
Rnf43Q5NCP0 Mir7052-201ENSMUST00000184821 65 ntBASIC1.4□□□□□ -2.19
Rnf43Q5NCP0 Gm25186-201ENSMUST00000083909 108 ntBASIC1.4□□□□□ -2.19
Rnf43Q5NCP0 Gm23012-201ENSMUST00000104149 83 ntBASIC1.39□□□□□ -2.19
Rnf43Q5NCP0 Gm25648-201ENSMUST00000177844 79 ntBASIC1.39□□□□□ -2.19
Rnf43Q5NCP0 Gm27937-201ENSMUST00000183605 88 ntBASIC1.39□□□□□ -2.19
Rnf43Q5NCP0 Gm24612-201ENSMUST00000083267 107 ntBASIC1.39□□□□□ -2.19
Rnf43Q5NCP0 Gm42533-201ENSMUST00000196247 157 ntBASIC1.38□□□□□ -2.19
Rnf43Q5NCP0 Gm23730-201ENSMUST00000083236 107 ntBASIC1.38□□□□□ -2.19
Rnf43Q5NCP0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Mir669h-201ENSMUST00000116944 125 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Gm23636-201ENSMUST00000175070 95 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Gm23410-201ENSMUST00000179967 107 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Mir1949-202ENSMUST00000199259 70 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Snord95-201ENSMUST00000082846 68 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Gm22505-201ENSMUST00000082956 108 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Gm22363-201ENSMUST00000083100 108 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Gm23814-201ENSMUST00000083230 102 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Mir500-201ENSMUST00000093600 92 ntBASIC1.37□□□□□ -2.19
Rnf43Q5NCP0 Gm24500-201ENSMUST00000158447 124 ntBASIC1.36□□□□□ -2.19
Rnf43Q5NCP0 Mir7063-201ENSMUST00000184158 91 ntBASIC1.36□□□□□ -2.19
Rnf43Q5NCP0 Gm22459-201ENSMUST00000082577 108 ntBASIC1.36□□□□□ -2.19
Rnf43Q5NCP0 Gm26438-201ENSMUST00000082593 107 ntBASIC1.36□□□□□ -2.19
Rnf43Q5NCP0 Gm6272-201ENSMUST00000121256 171 ntBASIC1.35□□□□□ -2.19
Rnf43Q5NCP0 Gm23328-201ENSMUST00000157418 132 ntBASIC1.35□□□□□ -2.19
Rnf43Q5NCP0 Mir196b-201ENSMUST00000083509 85 ntBASIC1.35□□□□□ -2.19
Rnf43Q5NCP0 Mir448-201ENSMUST00000083516 112 ntBASIC1.35□□□□□ -2.19
Rnf43Q5NCP0 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.35□□□□□ -2.19
Rnf43Q5NCP0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Rnf43Q5NCP0 Gm25495-201ENSMUST00000104431 131 ntBASIC1.34□□□□□ -2.19
Rnf43Q5NCP0 Gm13065-201ENSMUST00000119178 141 ntBASIC1.34□□□□□ -2.19
Rnf43Q5NCP0 Mir3079-201ENSMUST00000175428 90 ntBASIC1.34□□□□□ -2.19
Rnf43Q5NCP0 Gm22652-201ENSMUST00000083207 131 ntBASIC1.34□□□□□ -2.19
Rnf43Q5NCP0 Gm23708-201ENSMUST00000104367 123 ntBASIC1.33□□□□□ -2.2
Rnf43Q5NCP0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.33□□□□□ -2.2
Rnf43Q5NCP0 Gm27717-201ENSMUST00000183933 151 ntBASIC1.33□□□□□ -2.2
Rnf43Q5NCP0 Mir6394-201ENSMUST00000184738 99 ntBASIC1.33□□□□□ -2.2
Rnf43Q5NCP0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Rnf43Q5NCP0 Gm25465-201ENSMUST00000157716 105 ntBASIC1.32□□□□□ -2.2
Rnf43Q5NCP0 Gm27656-201ENSMUST00000185055 80 ntBASIC1.32□□□□□ -2.2
Rnf43Q5NCP0 Gm44490-201ENSMUST00000198566 127 ntBASIC1.32□□□□□ -2.2
Rnf43Q5NCP0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.32□□□□□ -2.2
Rnf43Q5NCP0 Mir101a-201ENSMUST00000083517 83 ntBASIC1.32□□□□□ -2.2
Rnf43Q5NCP0 Snord13-201ENSMUST00000157627 104 ntBASIC1.31□□□□□ -2.2
Rnf43Q5NCP0 Gm23853-201ENSMUST00000158375 104 ntBASIC1.31□□□□□ -2.2
Rnf43Q5NCP0 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.31□□□□□ -2.2
Rnf43Q5NCP0 Mir3071-201ENSMUST00000093621 80 ntBASIC1.31□□□□□ -2.2
Rnf43Q5NCP0 Gm25524-201ENSMUST00000101821 107 ntBASIC1.3□□□□□ -2.2
Rnf43Q5NCP0 Gm24233-201ENSMUST00000104317 122 ntBASIC1.3□□□□□ -2.2
Rnf43Q5NCP0 Gm23340-201ENSMUST00000158955 123 ntBASIC1.3□□□□□ -2.2
Rnf43Q5NCP0 Gm22401-201ENSMUST00000174927 117 ntBASIC1.3□□□□□ -2.2
Rnf43Q5NCP0 Gm24288-201ENSMUST00000157630 144 ntBASIC1.29□□□□□ -2.2
Rnf43Q5NCP0 Gm24342-201ENSMUST00000103907 104 ntBASIC1.28□□□□□ -2.2
Rnf43Q5NCP0 Gm22717-201ENSMUST00000122703 171 ntBASIC1.28□□□□□ -2.2
Rnf43Q5NCP0 Gm25440-201ENSMUST00000158279 154 ntBASIC1.28□□□□□ -2.2
Rnf43Q5NCP0 Gm25010-201ENSMUST00000158403 65 ntBASIC1.28□□□□□ -2.2
Rnf43Q5NCP0 Gm23630-201ENSMUST00000175292 104 ntBASIC1.28□□□□□ -2.2
Rnf43Q5NCP0 Gm23989-201ENSMUST00000117030 66 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm14533-201ENSMUST00000117088 93 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm25055-201ENSMUST00000157369 76 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm22520-201ENSMUST00000158269 129 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm25768-201ENSMUST00000158570 98 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm44458-201ENSMUST00000196594 143 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Gm29344-201ENSMUST00000068143 210 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Mir200b-201ENSMUST00000083615 70 ntBASIC1.27□□□□□ -2.21
Rnf43Q5NCP0 Mir6985-201ENSMUST00000184641 61 ntBASIC1.26□□□□□ -2.21
Rnf43Q5NCP0 Gm42677-201ENSMUST00000196363 127 ntBASIC1.26□□□□□ -2.21
Rnf43Q5NCP0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.26□□□□□ -2.21
Rnf43Q5NCP0 Gm42506-201ENSMUST00000202009 150 ntBASIC1.26□□□□□ -2.21
Rnf43Q5NCP0 Snord71-201ENSMUST00000104361 85 ntBASIC1.25□□□□□ -2.21
Rnf43Q5NCP0 Gm24942-201ENSMUST00000158328 114 ntBASIC1.25□□□□□ -2.21
Rnf43Q5NCP0 Gm25715-201ENSMUST00000158627 125 ntBASIC1.25□□□□□ -2.21
Rnf43Q5NCP0 Mir15a-201ENSMUST00000175266 84 ntBASIC1.25□□□□□ -2.21
Rnf43Q5NCP0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.24□□□□□ -2.21
Rnf43Q5NCP0 Gm25656-201ENSMUST00000158466 66 ntBASIC1.24□□□□□ -2.21
Rnf43Q5NCP0 Gm23416-201ENSMUST00000175520 95 ntBASIC1.24□□□□□ -2.21
Rnf43Q5NCP0 Mir211-201ENSMUST00000083651 106 ntBASIC1.24□□□□□ -2.21
Rnf43Q5NCP0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Rnf43Q5NCP0 Gm44211-201ENSMUST00000204867 145 ntBASIC1.23□□□□□ -2.21
Rnf43Q5NCP0 Mir33-201ENSMUST00000083531 69 ntBASIC1.23□□□□□ -2.21
Rnf43Q5NCP0 Gm22595-201ENSMUST00000104250 130 ntBASIC1.22□□□□□ -2.21
Rnf43Q5NCP0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.22□□□□□ -2.21
Rnf43Q5NCP0 Gm22565-201ENSMUST00000175540 69 ntBASIC1.22□□□□□ -2.21
Rnf43Q5NCP0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Gm26375-201ENSMUST00000101829 106 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Gm26338-201ENSMUST00000102372 110 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Gm24070-201ENSMUST00000104519 130 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Gm22720-201ENSMUST00000122710 87 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Gm24400-201ENSMUST00000157865 107 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Mir7663-201ENSMUST00000183950 61 ntBASIC1.21□□□□□ -2.22
Rnf43Q5NCP0 Mir7231-201ENSMUST00000196252 61 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms