Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm22149-201ENSMUST00000104442 136 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm24288-201ENSMUST00000157630 144 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm20473-201ENSMUST00000173064 112 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm25541-201ENSMUST00000116888 126 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Gm23221-201ENSMUST00000158118 93 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Gm24297-201ENSMUST00000158300 68 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Gm25958-201ENSMUST00000175114 71 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Mir3061-201ENSMUST00000175129 91 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Mir468-201ENSMUST00000197332 78 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Snord14a-201ENSMUST00000082807 87 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Snord95-201ENSMUST00000082846 68 ntBASIC1.69□□□□□ -2.14
Gm28047Q3US59 Gm23125-201ENSMUST00000157651 106 ntBASIC1.68□□□□□ -2.14
Gm28047Q3US59 Gm23967-201ENSMUST00000175062 78 ntBASIC1.68□□□□□ -2.14
Gm28047Q3US59 Gm45125-201ENSMUST00000206908 151 ntBASIC1.68□□□□□ -2.14
Gm28047Q3US59 Mir653-201ENSMUST00000102402 85 ntBASIC1.67□□□□□ -2.14
Gm28047Q3US59 Gm24229-201ENSMUST00000158830 118 ntBASIC1.67□□□□□ -2.14
Gm28047Q3US59 Gm27265-201ENSMUST00000183559 77 ntBASIC1.67□□□□□ -2.14
Gm28047Q3US59 Gm23558-201ENSMUST00000157823 80 ntBASIC1.66□□□□□ -2.14
Gm28047Q3US59 Gm23106-201ENSMUST00000157554 101 ntBASIC1.65□□□□□ -2.15
Gm28047Q3US59 Gm42677-201ENSMUST00000196363 127 ntBASIC1.65□□□□□ -2.15
Gm28047Q3US59 Gm25040-201ENSMUST00000103877 66 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Gm14533-201ENSMUST00000117088 93 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Gm24895-201ENSMUST00000122742 74 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Gm23036-201ENSMUST00000157885 99 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Gm22541-201ENSMUST00000158165 127 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Gm27326-201ENSMUST00000183504 95 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1.64□□□□□ -2.15
Gm28047Q3US59 Gm22720-201ENSMUST00000122710 87 ntBASIC1.63□□□□□ -2.15
Gm28047Q3US59 Gm23114-201ENSMUST00000158478 117 ntBASIC1.63□□□□□ -2.15
Gm28047Q3US59 Gm43911-201ENSMUST00000203097 76 ntBASIC1.63□□□□□ -2.15
Gm28047Q3US59 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.63□□□□□ -2.15
Gm28047Q3US59 Gm25650-201ENSMUST00000083784 162 ntBASIC1.63□□□□□ -2.15
Gm28047Q3US59 Gm25055-201ENSMUST00000157369 76 ntBASIC1.62□□□□□ -2.15
Gm28047Q3US59 Gm24902-201ENSMUST00000158126 123 ntBASIC1.62□□□□□ -2.15
Gm28047Q3US59 Mir125b-1-201ENSMUST00000175613 77 ntBASIC1.62□□□□□ -2.15
Gm28047Q3US59 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Gm28047Q3US59 Gm25936-201ENSMUST00000179952 114 ntBASIC1.61□□□□□ -2.15
Gm28047Q3US59 Mir6342-201ENSMUST00000183870 125 ntBASIC1.61□□□□□ -2.15
Gm28047Q3US59 Mir7675-201ENSMUST00000184262 58 ntBASIC1.61□□□□□ -2.15
Gm28047Q3US59 Gm27263-201ENSMUST00000184760 76 ntBASIC1.61□□□□□ -2.15
Gm28047Q3US59 Gm24555-201ENSMUST00000104548 124 ntBASIC1.6□□□□□ -2.15
Gm28047Q3US59 Gm23017-201ENSMUST00000177583 72 ntBASIC1.6□□□□□ -2.15
Gm28047Q3US59 Gm16399-201ENSMUST00000181423 219 ntBASIC1.6□□□□□ -2.15
Gm28047Q3US59 Gm27894-201ENSMUST00000184177 92 ntBASIC1.6□□□□□ -2.15
Gm28047Q3US59 Gm22879-201ENSMUST00000082895 74 ntBASIC1.6□□□□□ -2.15
Gm28047Q3US59 Mir377-201ENSMUST00000083504 68 ntBASIC1.6□□□□□ -2.15
Gm28047Q3US59 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.59□□□□□ -2.15
Gm28047Q3US59 Gm23301-201ENSMUST00000082713 65 ntBASIC1.59□□□□□ -2.15
Gm28047Q3US59 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Gm28047Q3US59 Gm27493-201ENSMUST00000184128 78 ntBASIC1.58□□□□□ -2.16
Gm28047Q3US59 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Gm28047Q3US59 Gm26082-201ENSMUST00000104070 127 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 Gm23708-201ENSMUST00000104367 123 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 Mir466f-1-201ENSMUST00000104779 94 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 Mir1961-201ENSMUST00000158643 112 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 Gm25831-201ENSMUST00000158924 163 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 Mir8119-201ENSMUST00000183371 129 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1.57□□□□□ -2.16
Gm28047Q3US59 Gm22056-201ENSMUST00000083386 81 ntBASIC1.57□□□□□ -2.16
Gm28047Q3US59 Mir544-201ENSMUST00000103813 78 ntBASIC1.56□□□□□ -2.16
Gm28047Q3US59 Gm25656-201ENSMUST00000158466 66 ntBASIC1.56□□□□□ -2.16
Gm28047Q3US59 Mir7665-201ENSMUST00000184907 63 ntBASIC1.56□□□□□ -2.16
Gm28047Q3US59 Gm44211-201ENSMUST00000204867 145 ntBASIC1.56□□□□□ -2.16
Gm28047Q3US59 Gm43944-201ENSMUST00000205220 120 ntBASIC1.56□□□□□ -2.16
Gm28047Q3US59 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Gm28047Q3US59 Gm22673-201ENSMUST00000104415 131 ntBASIC1.55□□□□□ -2.16
Gm28047Q3US59 Gm22232-201ENSMUST00000104654 94 ntBASIC1.55□□□□□ -2.16
Gm28047Q3US59 Mir1933-201ENSMUST00000158930 88 ntBASIC1.55□□□□□ -2.16
Gm28047Q3US59 Mir709-201ENSMUST00000102190 88 ntBASIC1.54□□□□□ -2.16
Gm28047Q3US59 Gm24372-201ENSMUST00000104400 110 ntBASIC1.54□□□□□ -2.16
Gm28047Q3US59 Gm24194-201ENSMUST00000116805 90 ntBASIC1.54□□□□□ -2.16
Gm28047Q3US59 AC161271.1-201ENSMUST00000226914 150 ntBASIC1.54□□□□□ -2.16
Gm28047Q3US59 Gm22164-201ENSMUST00000158413 106 ntBASIC1.53□□□□□ -2.16
Gm28047Q3US59 Mir100-201ENSMUST00000175270 80 ntBASIC1.53□□□□□ -2.16
Gm28047Q3US59 Gm23419-201ENSMUST00000175523 84 ntBASIC1.53□□□□□ -2.16
Gm28047Q3US59 Mir6240-201ENSMUST00000184281 117 ntBASIC1.53□□□□□ -2.16
Gm28047Q3US59 Gm24796-201ENSMUST00000104007 107 ntBASIC1.52□□□□□ -2.17
Gm28047Q3US59 Gm25274-201ENSMUST00000104296 135 ntBASIC1.52□□□□□ -2.17
Gm28047Q3US59 Gm23122-201ENSMUST00000157645 103 ntBASIC1.52□□□□□ -2.17
Gm28047Q3US59 Gm26038-201ENSMUST00000158151 106 ntBASIC1.52□□□□□ -2.17
Gm28047Q3US59 Mir3968-201ENSMUST00000175355 100 ntBASIC1.52□□□□□ -2.17
Gm28047Q3US59 Mir1949-202ENSMUST00000199259 70 ntBASIC1.52□□□□□ -2.17
Gm28047Q3US59 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Gm28047Q3US59 Snord69-201ENSMUST00000104024 80 ntBASIC1.51□□□□□ -2.17
Gm28047Q3US59 Gm24500-201ENSMUST00000158447 124 ntBASIC1.51□□□□□ -2.17
Gm28047Q3US59 Gm23339-201ENSMUST00000158962 139 ntBASIC1.51□□□□□ -2.17
Gm28047Q3US59 Gm22466-201ENSMUST00000175278 69 ntBASIC1.51□□□□□ -2.17
Gm28047Q3US59 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.51□□□□□ -2.17
Gm28047Q3US59 Snord1a-201ENSMUST00000083160 74 ntBASIC1.51□□□□□ -2.17
Gm28047Q3US59 Gm27717-201ENSMUST00000183933 151 ntBASIC1.5□□□□□ -2.17
Gm28047Q3US59 Gm44396-201ENSMUST00000199843 114 ntBASIC1.5□□□□□ -2.17
Gm28047Q3US59 Gm22652-201ENSMUST00000083207 131 ntBASIC1.5□□□□□ -2.17
Gm28047Q3US59 Gm24233-201ENSMUST00000104317 122 ntBASIC1.49□□□□□ -2.17
Gm28047Q3US59 Gm13065-201ENSMUST00000119178 141 ntBASIC1.49□□□□□ -2.17
Gm28047Q3US59 Gm25663-201ENSMUST00000157698 135 ntBASIC1.49□□□□□ -2.17
Gm28047Q3US59 Mir6962-201ENSMUST00000199512 63 ntBASIC1.49□□□□□ -2.17
Gm28047Q3US59 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.49□□□□□ -2.17
Gm28047Q3US59 Snord13-201ENSMUST00000157627 104 ntBASIC1.48□□□□□ -2.17
Gm28047Q3US59 Gm24549-201ENSMUST00000158647 139 ntBASIC1.48□□□□□ -2.17
Gm28047Q3US59 Gm22929-201ENSMUST00000175517 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 153.8 ms