Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm23012-201ENSMUST00000104149 83 ntBASIC0.41□□□□□ -2.34
Ssbp4Q3U4B1 Gm24278-201ENSMUST00000104239 127 ntBASIC0.41□□□□□ -2.34
Ssbp4Q3U4B1 Gm26484-201ENSMUST00000158018 106 ntBASIC0.41□□□□□ -2.34
Ssbp4Q3U4B1 Gm22406-201ENSMUST00000174923 93 ntBASIC0.41□□□□□ -2.34
Ssbp4Q3U4B1 Gm29047-201ENSMUST00000189816 108 ntBASIC0.41□□□□□ -2.34
Ssbp4Q3U4B1 Gm44490-201ENSMUST00000198566 127 ntBASIC0.41□□□□□ -2.34
Ssbp4Q3U4B1 Gm23788-201ENSMUST00000122535 106 ntBASIC0.4□□□□□ -2.35
Ssbp4Q3U4B1 Gm25622-201ENSMUST00000157217 104 ntBASIC0.4□□□□□ -2.35
Ssbp4Q3U4B1 Gm23715-201ENSMUST00000157354 106 ntBASIC0.4□□□□□ -2.35
Ssbp4Q3U4B1 Gm25160-201ENSMUST00000158914 102 ntBASIC0.4□□□□□ -2.35
Ssbp4Q3U4B1 Gm44457-201ENSMUST00000198109 76 ntBASIC0.4□□□□□ -2.35
Ssbp4Q3U4B1 Gm22303-201ENSMUST00000082686 122 ntBASIC0.4□□□□□ -2.35
Ssbp4Q3U4B1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Gm25061-201ENSMUST00000104665 107 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Gm25328-201ENSMUST00000175013 107 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Mir3105-201ENSMUST00000175480 85 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Gm43038-201ENSMUST00000202359 88 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Gm22302-201ENSMUST00000082657 106 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Gm26207-201ENSMUST00000082909 104 ntBASIC0.39□□□□□ -2.35
Ssbp4Q3U4B1 Gm25964-201ENSMUST00000157171 97 ntBASIC0.38□□□□□ -2.35
Ssbp4Q3U4B1 Gm25740-201ENSMUST00000180247 107 ntBASIC0.38□□□□□ -2.35
Ssbp4Q3U4B1 Gm44327-201ENSMUST00000200068 117 ntBASIC0.38□□□□□ -2.35
Ssbp4Q3U4B1 Gm26438-201ENSMUST00000082593 107 ntBASIC0.38□□□□□ -2.35
Ssbp4Q3U4B1 Gm24580-201ENSMUST00000103965 131 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm25542-201ENSMUST00000116889 94 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm24199-201ENSMUST00000157808 136 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm24963-201ENSMUST00000157916 144 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Snora26-201ENSMUST00000175614 121 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm24674-201ENSMUST00000179194 104 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm25870-201ENSMUST00000179845 79 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm45541-201ENSMUST00000210443 54 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Snord95-201ENSMUST00000082846 68 ntBASIC0.37□□□□□ -2.35
Ssbp4Q3U4B1 Gm24868-201ENSMUST00000157265 136 ntBASIC0.36□□□□□ -2.35
Ssbp4Q3U4B1 Gm23672-201ENSMUST00000157471 107 ntBASIC0.36□□□□□ -2.35
Ssbp4Q3U4B1 Gm24077-201ENSMUST00000158183 136 ntBASIC0.36□□□□□ -2.35
Ssbp4Q3U4B1 Gm26359-201ENSMUST00000158873 101 ntBASIC0.36□□□□□ -2.35
Ssbp4Q3U4B1 Gm43432-201ENSMUST00000196352 121 ntBASIC0.36□□□□□ -2.35
Ssbp4Q3U4B1 Gm25644-201ENSMUST00000083209 107 ntBASIC0.36□□□□□ -2.35
Ssbp4Q3U4B1 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Gm25991-201ENSMUST00000102439 99 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Gm22033-201ENSMUST00000116947 90 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Gm25619-201ENSMUST00000122621 104 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Gm14947-201ENSMUST00000133704 303 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Gm25055-201ENSMUST00000157369 76 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Mir3108-201ENSMUST00000175500 79 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Mir7079-201ENSMUST00000184697 69 ntBASIC0.35□□□□□ -2.35
Ssbp4Q3U4B1 Gm25756-201ENSMUST00000103990 136 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm24064-201ENSMUST00000157486 106 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm22431-201ENSMUST00000158545 107 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm22239-201ENSMUST00000175220 103 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm27549-201ENSMUST00000183508 62 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm42845-201ENSMUST00000197766 105 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm44828-201ENSMUST00000203745 106 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm25854-201ENSMUST00000082792 72 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Mir126a-201ENSMUST00000083606 73 ntBASIC0.34□□□□□ -2.36
Ssbp4Q3U4B1 Gm25408-201ENSMUST00000104104 133 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Mir669h-201ENSMUST00000116944 125 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm22720-201ENSMUST00000122710 87 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm23500-201ENSMUST00000157735 98 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm25382-201ENSMUST00000157811 97 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm23783-201ENSMUST00000157941 102 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm26007-201ENSMUST00000158798 120 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm27980-201ENSMUST00000184094 169 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Gm29432-201ENSMUST00000185397 139 ntBASIC0.33□□□□□ -2.36
Ssbp4Q3U4B1 Mir670-201ENSMUST00000102380 100 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm25417-201ENSMUST00000104212 131 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm22413-201ENSMUST00000175465 85 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm27987-201ENSMUST00000184023 93 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm25798-201ENSMUST00000082641 107 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm24134-201ENSMUST00000083361 71 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm23347-201ENSMUST00000083823 82 ntBASIC0.32□□□□□ -2.36
Ssbp4Q3U4B1 Gm25787-201ENSMUST00000104709 92 ntBASIC0.31□□□□□ -2.36
Ssbp4Q3U4B1 Gm22983-201ENSMUST00000158308 104 ntBASIC0.31□□□□□ -2.36
Ssbp4Q3U4B1 Gm25656-201ENSMUST00000158466 66 ntBASIC0.31□□□□□ -2.36
Ssbp4Q3U4B1 Gm26499-201ENSMUST00000178544 79 ntBASIC0.31□□□□□ -2.36
Ssbp4Q3U4B1 Gm26096-201ENSMUST00000179084 79 ntBASIC0.31□□□□□ -2.36
Ssbp4Q3U4B1 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.31□□□□□ -2.36
Ssbp4Q3U4B1 Gm24593-201ENSMUST00000122507 106 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 Mir1950-201ENSMUST00000158526 74 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 Mir7065-201ENSMUST00000185110 61 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 AC122335.1-201ENSMUST00000217587 175 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.3□□□□□ -2.36
Ssbp4Q3U4B1 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm25609-201ENSMUST00000104019 104 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm24988-201ENSMUST00000104460 121 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm14533-201ENSMUST00000117088 93 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm24288-201ENSMUST00000157630 144 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm23306-201ENSMUST00000179058 105 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm44345-201ENSMUST00000199560 135 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Gm24203-201ENSMUST00000082949 114 ntBASIC0.29□□□□□ -2.36
Ssbp4Q3U4B1 Mir741-201ENSMUST00000103931 71 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 137.7 ms