Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Mir1949-202ENSMUST00000199259 70 ntBASIC1.05□□□□□ -2.24
Usp39Q3TIX9 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
Usp39Q3TIX9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.04□□□□□ -2.24
Usp39Q3TIX9 Mir6381-201ENSMUST00000183426 87 ntBASIC1.04□□□□□ -2.24
Usp39Q3TIX9 Mir376b-201ENSMUST00000195930 82 ntBASIC1.04□□□□□ -2.24
Usp39Q3TIX9 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Usp39Q3TIX9 Gm23500-201ENSMUST00000157735 98 ntBASIC1.03□□□□□ -2.24
Usp39Q3TIX9 Mir3108-201ENSMUST00000175500 79 ntBASIC1.03□□□□□ -2.24
Usp39Q3TIX9 Gm23708-201ENSMUST00000104367 123 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm23893-201ENSMUST00000158106 134 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm25715-201ENSMUST00000158627 125 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm24331-201ENSMUST00000175099 67 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Mir3079-201ENSMUST00000175428 90 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm23801-201ENSMUST00000175561 67 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm24485-201ENSMUST00000178283 67 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.02□□□□□ -2.25
Usp39Q3TIX9 Gm23989-201ENSMUST00000117030 66 ntBASIC1.01□□□□□ -2.25
Usp39Q3TIX9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Usp39Q3TIX9 Gm23012-201ENSMUST00000104149 83 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 Gm13065-201ENSMUST00000119178 141 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 n-R5s157-201ENSMUST00000122543 121 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 Gm22520-201ENSMUST00000158269 129 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 Gm23853-201ENSMUST00000158375 104 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 Gm23347-201ENSMUST00000083823 82 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 Gm5581-201ENSMUST00000072940 2550 ntBASIC1□□□□□ -2.25
Usp39Q3TIX9 Gm24233-201ENSMUST00000104317 122 ntBASIC0.99□□□□□ -2.25
Usp39Q3TIX9 Gm29432-201ENSMUST00000185397 139 ntBASIC0.99□□□□□ -2.25
Usp39Q3TIX9 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.99□□□□□ -2.25
Usp39Q3TIX9 Mir22-201ENSMUST00000083595 95 ntBASIC0.99□□□□□ -2.25
Usp39Q3TIX9 Gm23856-201ENSMUST00000158380 99 ntBASIC0.98□□□□□ -2.25
Usp39Q3TIX9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.98□□□□□ -2.25
Usp39Q3TIX9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.98□□□□□ -2.25
Usp39Q3TIX9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.98□□□□□ -2.25
Usp39Q3TIX9 Gm45655-201ENSMUST00000211625 160 ntBASIC0.98□□□□□ -2.25
Usp39Q3TIX9 Gm22652-201ENSMUST00000083207 131 ntBASIC0.98□□□□□ -2.25
Usp39Q3TIX9 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Gm24431-201ENSMUST00000104073 66 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Gm25506-201ENSMUST00000104339 70 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Mir7663-201ENSMUST00000183950 61 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Gm26438-201ENSMUST00000082593 107 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Mir27b-201ENSMUST00000083541 73 ntBASIC0.97□□□□□ -2.25
Usp39Q3TIX9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.96□□□□□ -2.26
Usp39Q3TIX9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.96□□□□□ -2.26
Usp39Q3TIX9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.96□□□□□ -2.26
Usp39Q3TIX9 Gm25552-201ENSMUST00000158081 91 ntBASIC0.95□□□□□ -2.26
Usp39Q3TIX9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Usp39Q3TIX9 Mir6380-201ENSMUST00000184334 81 ntBASIC0.95□□□□□ -2.26
Usp39Q3TIX9 Snord95-201ENSMUST00000082846 68 ntBASIC0.95□□□□□ -2.26
Usp39Q3TIX9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.94□□□□□ -2.26
Usp39Q3TIX9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.94□□□□□ -2.26
Usp39Q3TIX9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.94□□□□□ -2.26
Usp39Q3TIX9 Snord45b-201ENSMUST00000082797 71 ntBASIC0.94□□□□□ -2.26
Usp39Q3TIX9 Mir10b-201ENSMUST00000083566 68 ntBASIC0.94□□□□□ -2.26
Usp39Q3TIX9 Mir494-201ENSMUST00000093632 85 ntBASIC0.94□□□□□ -2.26
Usp39Q3TIX9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Usp39Q3TIX9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.93□□□□□ -2.26
Usp39Q3TIX9 Mir7673-201ENSMUST00000184567 64 ntBASIC0.93□□□□□ -2.26
Usp39Q3TIX9 Mir669h-201ENSMUST00000116944 125 ntBASIC0.92□□□□□ -2.26
Usp39Q3TIX9 Gm27937-201ENSMUST00000183605 88 ntBASIC0.92□□□□□ -2.26
Usp39Q3TIX9 Gm22469-201ENSMUST00000104118 133 ntBASIC0.91□□□□□ -2.26
Usp39Q3TIX9 Mir7010-201ENSMUST00000183464 63 ntBASIC0.91□□□□□ -2.26
Usp39Q3TIX9 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.91□□□□□ -2.26
Usp39Q3TIX9 Gm24396-201ENSMUST00000116905 93 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Gm25055-201ENSMUST00000157369 76 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Gm27554-201ENSMUST00000185074 98 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Gm27977-201ENSMUST00000185159 111 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Gm22459-201ENSMUST00000082577 108 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Mir15b-201ENSMUST00000083646 64 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Mir3071-201ENSMUST00000093621 80 ntBASIC0.9□□□□□ -2.27
Usp39Q3TIX9 Gm22087-201ENSMUST00000158339 88 ntBASIC0.89□□□□□ -2.27
Usp39Q3TIX9 Gm24226-201ENSMUST00000158826 97 ntBASIC0.89□□□□□ -2.27
Usp39Q3TIX9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.89□□□□□ -2.27
Usp39Q3TIX9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.88□□□□□ -2.27
Usp39Q3TIX9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.88□□□□□ -2.27
Usp39Q3TIX9 Gm25166-201ENSMUST00000158909 111 ntBASIC0.88□□□□□ -2.27
Usp39Q3TIX9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.88□□□□□ -2.27
Usp39Q3TIX9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.88□□□□□ -2.27
Usp39Q3TIX9 Gm22720-201ENSMUST00000122710 87 ntBASIC0.87□□□□□ -2.27
Usp39Q3TIX9 Gm25656-201ENSMUST00000158466 66 ntBASIC0.87□□□□□ -2.27
Usp39Q3TIX9 Gm23649-201ENSMUST00000179007 107 ntBASIC0.87□□□□□ -2.27
Usp39Q3TIX9 Gm14533-201ENSMUST00000117088 93 ntBASIC0.86□□□□□ -2.27
Usp39Q3TIX9 Gm25641-201ENSMUST00000175135 108 ntBASIC0.86□□□□□ -2.27
Usp39Q3TIX9 Gm24321-201ENSMUST00000175348 80 ntBASIC0.86□□□□□ -2.27
Usp39Q3TIX9 Gm42677-201ENSMUST00000196363 127 ntBASIC0.86□□□□□ -2.27
Usp39Q3TIX9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
Usp39Q3TIX9 Mir876-201ENSMUST00000104659 81 ntBASIC0.85□□□□□ -2.27
Usp39Q3TIX9 Gm25787-201ENSMUST00000104709 92 ntBASIC0.85□□□□□ -2.27
Usp39Q3TIX9 Gm25183-201ENSMUST00000157752 106 ntBASIC0.85□□□□□ -2.27
Usp39Q3TIX9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.85□□□□□ -2.27
Usp39Q3TIX9 Mir33-201ENSMUST00000083531 69 ntBASIC0.85□□□□□ -2.27
Usp39Q3TIX9 Gm24288-201ENSMUST00000157630 144 ntBASIC0.84□□□□□ -2.27
Usp39Q3TIX9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.84□□□□□ -2.27
Usp39Q3TIX9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.84□□□□□ -2.27
Usp39Q3TIX9 Gm26257-201ENSMUST00000122500 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms