Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.39□□□□□ -2.19
Col6a1Q04857 Mir126a-201ENSMUST00000083606 73 ntBASIC1.39□□□□□ -2.19
Col6a1Q04857 Mir741-201ENSMUST00000103931 71 ntBASIC1.38□□□□□ -2.19
Col6a1Q04857 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.38□□□□□ -2.19
Col6a1Q04857 Mir876-201ENSMUST00000104659 81 ntBASIC1.37□□□□□ -2.19
Col6a1Q04857 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Col6a1Q04857 Mir1949-202ENSMUST00000199259 70 ntBASIC1.37□□□□□ -2.19
Col6a1Q04857 Gm22203-201ENSMUST00000158605 58 ntBASIC1.36□□□□□ -2.19
Col6a1Q04857 Mir3079-201ENSMUST00000175428 90 ntBASIC1.36□□□□□ -2.19
Col6a1Q04857 Gm23853-201ENSMUST00000158375 104 ntBASIC1.35□□□□□ -2.19
Col6a1Q04857 Gm25161-201ENSMUST00000158913 132 ntBASIC1.35□□□□□ -2.19
Col6a1Q04857 Gm25128-201ENSMUST00000083339 76 ntBASIC1.35□□□□□ -2.19
Col6a1Q04857 Gm24865-201ENSMUST00000103246 96 ntBASIC1.34□□□□□ -2.19
Col6a1Q04857 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col6a1Q04857 Mir211-201ENSMUST00000083651 106 ntBASIC1.34□□□□□ -2.19
Col6a1Q04857 Gm23989-201ENSMUST00000117030 66 ntBASIC1.33□□□□□ -2.2
Col6a1Q04857 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.33□□□□□ -2.2
Col6a1Q04857 Gm23708-201ENSMUST00000104367 123 ntBASIC1.32□□□□□ -2.2
Col6a1Q04857 Gm24396-201ENSMUST00000116905 93 ntBASIC1.32□□□□□ -2.2
Col6a1Q04857 Gm25552-201ENSMUST00000158081 91 ntBASIC1.32□□□□□ -2.2
Col6a1Q04857 Gm29432-201ENSMUST00000185397 139 ntBASIC1.32□□□□□ -2.2
Col6a1Q04857 Gm23893-201ENSMUST00000158106 134 ntBASIC1.31□□□□□ -2.2
Col6a1Q04857 Gm25328-201ENSMUST00000175013 107 ntBASIC1.31□□□□□ -2.2
Col6a1Q04857 Gm45655-201ENSMUST00000211625 160 ntBASIC1.31□□□□□ -2.2
Col6a1Q04857 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.31□□□□□ -2.2
Col6a1Q04857 Gm23012-201ENSMUST00000104149 83 ntBASIC1.3□□□□□ -2.2
Col6a1Q04857 Gm24233-201ENSMUST00000104317 122 ntBASIC1.3□□□□□ -2.2
Col6a1Q04857 Gm23008-201ENSMUST00000158946 80 ntBASIC1.3□□□□□ -2.2
Col6a1Q04857 Gm42533-201ENSMUST00000196247 157 ntBASIC1.3□□□□□ -2.2
Col6a1Q04857 Gm24580-201ENSMUST00000103965 131 ntBASIC1.29□□□□□ -2.2
Col6a1Q04857 Gm27549-201ENSMUST00000183508 62 ntBASIC1.29□□□□□ -2.2
Col6a1Q04857 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.29□□□□□ -2.2
Col6a1Q04857 Snord45b-201ENSMUST00000082797 71 ntBASIC1.29□□□□□ -2.2
Col6a1Q04857 Snord95-201ENSMUST00000082846 68 ntBASIC1.29□□□□□ -2.2
Col6a1Q04857 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.29□□□□□ -2.2
Col6a1Q04857 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Col6a1Q04857 Mir669h-201ENSMUST00000116944 125 ntBASIC1.28□□□□□ -2.2
Col6a1Q04857 Gm23416-201ENSMUST00000175520 95 ntBASIC1.28□□□□□ -2.2
Col6a1Q04857 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Col6a1Q04857 Gm23783-201ENSMUST00000157941 102 ntBASIC1.27□□□□□ -2.21
Col6a1Q04857 Gm22485-201ENSMUST00000157990 109 ntBASIC1.27□□□□□ -2.21
Col6a1Q04857 Gm23856-201ENSMUST00000158380 99 ntBASIC1.27□□□□□ -2.21
Col6a1Q04857 Mir3108-201ENSMUST00000175500 79 ntBASIC1.27□□□□□ -2.21
Col6a1Q04857 Gm27554-201ENSMUST00000185074 98 ntBASIC1.27□□□□□ -2.21
Col6a1Q04857 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.27□□□□□ -2.21
Col6a1Q04857 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Gm25166-201ENSMUST00000158909 111 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Gm24331-201ENSMUST00000175099 67 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Gm23801-201ENSMUST00000175561 67 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Gm24485-201ENSMUST00000178283 67 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Mir7010-201ENSMUST00000183464 63 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Gm42677-201ENSMUST00000196363 127 ntBASIC1.26□□□□□ -2.21
Col6a1Q04857 Mir7079-201ENSMUST00000184697 69 ntBASIC1.25□□□□□ -2.21
Col6a1Q04857 Gm24445-201ENSMUST00000083981 107 ntBASIC1.25□□□□□ -2.21
Col6a1Q04857 Mir494-201ENSMUST00000093632 85 ntBASIC1.25□□□□□ -2.21
Col6a1Q04857 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col6a1Q04857 Gm25641-201ENSMUST00000175135 108 ntBASIC1.24□□□□□ -2.21
Col6a1Q04857 Gm24020-201ENSMUST00000180156 108 ntBASIC1.24□□□□□ -2.21
Col6a1Q04857 Gm44211-201ENSMUST00000204867 145 ntBASIC1.24□□□□□ -2.21
Col6a1Q04857 Mir101a-201ENSMUST00000083517 83 ntBASIC1.24□□□□□ -2.21
Col6a1Q04857 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.23□□□□□ -2.21
Col6a1Q04857 Gm22520-201ENSMUST00000158269 129 ntBASIC1.23□□□□□ -2.21
Col6a1Q04857 Gm25656-201ENSMUST00000158466 66 ntBASIC1.23□□□□□ -2.21
Col6a1Q04857 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.23□□□□□ -2.21
Col6a1Q04857 Gm24500-201ENSMUST00000158447 124 ntBASIC1.22□□□□□ -2.21
Col6a1Q04857 Mir15a-201ENSMUST00000175266 84 ntBASIC1.22□□□□□ -2.21
Col6a1Q04857 Gm25300-201ENSMUST00000175284 84 ntBASIC1.22□□□□□ -2.21
Col6a1Q04857 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col6a1Q04857 Gm22980-201ENSMUST00000082608 70 ntBASIC1.21□□□□□ -2.22
Col6a1Q04857 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.21□□□□□ -2.22
Col6a1Q04857 Gm26363-201ENSMUST00000158866 83 ntBASIC1.2□□□□□ -2.22
Col6a1Q04857 Gm25138-201ENSMUST00000083248 136 ntBASIC1.2□□□□□ -2.22
Col6a1Q04857 Mir27b-201ENSMUST00000083541 73 ntBASIC1.2□□□□□ -2.22
Col6a1Q04857 Gm26438-201ENSMUST00000082593 107 ntBASIC1.19□□□□□ -2.22
Col6a1Q04857 Gm14533-201ENSMUST00000117088 93 ntBASIC1.18□□□□□ -2.22
Col6a1Q04857 Gm27937-201ENSMUST00000183605 88 ntBASIC1.18□□□□□ -2.22
Col6a1Q04857 Gm27977-201ENSMUST00000185159 111 ntBASIC1.18□□□□□ -2.22
Col6a1Q04857 Gm23126-201ENSMUST00000104260 134 ntBASIC1.17□□□□□ -2.22
Col6a1Q04857 Gm26257-201ENSMUST00000122500 107 ntBASIC1.17□□□□□ -2.22
Col6a1Q04857 Mir219b-201ENSMUST00000198317 65 ntBASIC1.17□□□□□ -2.22
Col6a1Q04857 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.17□□□□□ -2.22
Col6a1Q04857 Mir15b-201ENSMUST00000083646 64 ntBASIC1.17□□□□□ -2.22
Col6a1Q04857 Gm22340-201ENSMUST00000157717 114 ntBASIC1.16□□□□□ -2.22
Col6a1Q04857 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.16□□□□□ -2.22
Col6a1Q04857 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.16□□□□□ -2.22
Col6a1Q04857 Gm27943-201ENSMUST00000184844 116 ntBASIC1.16□□□□□ -2.22
Col6a1Q04857 Mir6381-201ENSMUST00000183426 87 ntBASIC1.15□□□□□ -2.23
Col6a1Q04857 Mir7091-201ENSMUST00000184075 79 ntBASIC1.15□□□□□ -2.23
Col6a1Q04857 Gm27980-201ENSMUST00000184094 169 ntBASIC1.15□□□□□ -2.23
Col6a1Q04857 Mir1904-201ENSMUST00000122702 80 ntBASIC1.14□□□□□ -2.23
Col6a1Q04857 Gm24321-201ENSMUST00000175348 80 ntBASIC1.14□□□□□ -2.23
Col6a1Q04857 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Col6a1Q04857 Snord35a-201ENSMUST00000083884 90 ntBASIC1.14□□□□□ -2.23
Col6a1Q04857 Gm24579-201ENSMUST00000103964 144 ntBASIC1.13□□□□□ -2.23
Col6a1Q04857 Gm24226-201ENSMUST00000158826 97 ntBASIC1.13□□□□□ -2.23
Col6a1Q04857 Gm23649-201ENSMUST00000179007 107 ntBASIC1.13□□□□□ -2.23
Col6a1Q04857 Mir7673-201ENSMUST00000184567 64 ntBASIC1.13□□□□□ -2.23
Col6a1Q04857 DQ267101-201ENSMUST00000082562 73 ntBASIC1.13□□□□□ -2.23
Col6a1Q04857 Mir22-201ENSMUST00000083595 95 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 241.1 ms